RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 COL5A3P25940 1745 aaPredicted RBP5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 PLIN1O60240 522 aa5.38□□□□□ -1.55
GAPVD1-216ENST00000474637 R3HDM1Q15032 1099 aaKnown RBP5.38□□□□□ -1.55
GAPVD1-216ENST00000474637 ZNF790Q6PG37 636 aa5.38□□□□□ -1.55
GAPVD1-216ENST00000474637 AK7Q96M32 723 aa5.38□□□□□ -1.55
GAPVD1-216ENST00000474637 FMNL2Q96PY5 1086 aa5.38□□□□□ -1.55
GAPVD1-216ENST00000474637 CASZ1Q86V15 1759 aa5.38□□□□□ -1.55
GAPVD1-216ENST00000474637 CNTNAP4Q9C0A0 1308 aa5.38□□□□□ -1.55
GAPVD1-216ENST00000474637 TJP1Q07157 1748 aa5.38□□□□□ -1.55
GAPVD1-216ENST00000474637 CCDC27Q2M243 656 aa5.38□□□□□ -1.55
GAPVD1-216ENST00000474637 SAMD1Q6SPF0 538 aaPredicted RBP5.38□□□□□ -1.55
GAPVD1-216ENST00000474637 IL27Q8NEV9 243 aa5.38□□□□□ -1.55
GAPVD1-216ENST00000474637 TFCP2L1Q9NZI6 479 aa5.38□□□□□ -1.55
GAPVD1-216ENST00000474637 KDM3BQ7LBC6 1761 aa5.38□□□□□ -1.55
GAPVD1-216ENST00000474637 PTCD1O75127 700 aaKnown RBP5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 SLC39A6Q13433 755 aa5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 DCTN1Q14203 1278 aa5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 ZNF827Q17R98 1081 aa5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 LINC00116Q8NCU8 138 aa5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 SLC16A10Q8TF71 515 aa5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 HEG1Q9ULI3 1381 aa5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 TUBGCP6Q96RT7 1819 aa5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 LRP5O75197 1615 aa5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 PSDA5PKW4 1024 aaPredicted RBP5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 APAF1O14727 1248 aa5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 STARD3NLO95772 234 aa5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 SSFA2P28290 1259 aa5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 ITPK1Q13572 414 aa5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 NEUROD2Q15784 382 aa5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 TRIM35Q9UPQ4 493 aa5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 RRP7AQ9Y3A4 280 aaKnown RBP5.37□□□□□ -1.55
GAPVD1-216ENST00000474637 UBR3Q6ZT12 1888 aa5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 SNRPA1P09661 255 aaKnown RBP5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 KCNQ4P56696 695 aa5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 SLC4A9Q96Q91 983 aa5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 TSPYL4Q9UJ04 414 aa5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 RTCBQ9Y3I0 505 aaKnown RBP5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 PNPLA7Q6ZV29 1317 aa5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 A0A087WZG4 1122 aa5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 RPS6KA4O75676 772 aa5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 CYP19A1P11511 503 aaPredicted RBP5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 GNAI1P63096 354 aa5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 ZNF496Q96IT1 587 aaPredicted RBP5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 CFAP44Q96MT7 982 aa5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 RNF39Q9H2S5 420 aa5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 CCDC87Q9NVE4 849 aa5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 IFT57Q9NWB7 429 aa5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 NOP58Q9Y2X3 529 aaKnown RBP5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 LAMB4A4D0S4 1761 aa5.36□□□□□ -1.55
GAPVD1-216ENST00000474637 IL16Q14005 1332 aa5.35□□□□□ -1.55
GAPVD1-216ENST00000474637 CHL1O00533 1208 aa5.35□□□□□ -1.55
GAPVD1-216ENST00000474637 GNPATO15228 680 aa5.35□□□□□ -1.55
GAPVD1-216ENST00000474637 CRKLP46109 303 aaKnown RBP5.35□□□□□ -1.55
GAPVD1-216ENST00000474637 TRAPPC3LQ5T215 181 aa5.35□□□□□ -1.55
GAPVD1-216ENST00000474637 DNAJC10Q8IXB1 793 aa5.35□□□□□ -1.55
GAPVD1-216ENST00000474637 THUMPD2Q9BTF0 503 aaKnown RBP5.35□□□□□ -1.55
GAPVD1-216ENST00000474637 CHMP4AQ9BY43 222 aa5.35□□□□□ -1.55
GAPVD1-216ENST00000474637 MTFR1LQ9H019 292 aa5.35□□□□□ -1.55
GAPVD1-216ENST00000474637 SPON1Q9HCB6 807 aa5.35□□□□□ -1.55
GAPVD1-216ENST00000474637 COL24A1Q17RW2 1714 aa5.35□□□□□ -1.55
GAPVD1-216ENST00000474637 EIF4A1P60842 406 aaKnown RBP5.35□□□□□ -1.55
GAPVD1-216ENST00000474637 WDR63Q8IWG1 891 aa5.35□□□□□ -1.55
GAPVD1-216ENST00000474637 SOS1Q07889 1333 aaPredicted RBP5.34□□□□□ -1.55
GAPVD1-216ENST00000474637 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.34□□□□□ -1.55
GAPVD1-216ENST00000474637 KCNQ3O43525 872 aa5.34□□□□□ -1.55
GAPVD1-216ENST00000474637 HOXB7P09629 217 aa5.34□□□□□ -1.55
GAPVD1-216ENST00000474637 ZNF853P0CG23 659 aa5.34□□□□□ -1.55
GAPVD1-216ENST00000474637 RTL5Q5HYW3 569 aaPredicted RBP5.34□□□□□ -1.55
GAPVD1-216ENST00000474637 C20orf194Q5TEA3 1177 aa5.34□□□□□ -1.55
GAPVD1-216ENST00000474637 INTS5Q6P9B9 1019 aaKnown RBP5.34□□□□□ -1.55
GAPVD1-216ENST00000474637 NPM2Q86SE8 214 aaKnown RBP5.34□□□□□ -1.55
GAPVD1-216ENST00000474637 COL23A1Q86Y22 540 aaPredicted RBP5.34□□□□□ -1.55
GAPVD1-216ENST00000474637 LAS1LQ9Y4W2 734 aaKnown RBP5.34□□□□□ -1.55
GAPVD1-216ENST00000474637 ERBB4Q15303 1308 aa5.34□□□□□ -1.55
GAPVD1-216ENST00000474637 PHF14O94880 888 aa5.34□□□□□ -1.56
GAPVD1-216ENST00000474637 POLD1P28340 1107 aa5.34□□□□□ -1.56
GAPVD1-216ENST00000474637 RFC4P35249 363 aa5.34□□□□□ -1.56
GAPVD1-216ENST00000474637 WWC1Q8IX03 1113 aa5.34□□□□□ -1.56
GAPVD1-216ENST00000474637 CRBNQ96SW2 442 aa5.34□□□□□ -1.56
GAPVD1-216ENST00000474637 MIS18AQ9NYP9 233 aa5.34□□□□□ -1.56
GAPVD1-216ENST00000474637 COL15A1P39059 1388 aa5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 MYH14Q7Z406 1995 aaKnown RBP5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 GIGYF1O75420 1035 aaPredicted RBP5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 IL6STP40189 918 aaPredicted RBP5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 GOLGA2Q08379 1002 aa5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 DUSP27Q5VZP5 1158 aa5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 IPO9Q96P70 1041 aaKnown RBP5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 TCERG1O14776 1098 aaKnown RBP5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 RGL2O15211 777 aa5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 EIF5BO60841 1220 aaKnown RBP5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 ZPR1O75312 459 aa5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 ZBTB7AO95365 584 aa5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 ANP32AP39687 249 aaKnown RBP5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 SKAP1Q86WV1 359 aa5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 NLGN1Q8N2Q7 840 aa5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 ARHGEF1Q92888 912 aaKnown RBP5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 MYH16Q9H6N6 1097 aa5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 MBIPQ9NS73 344 aa5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 ZBTB1Q9Y2K1 713 aa5.33□□□□□ -1.56
GAPVD1-216ENST00000474637 USP16Q9Y5T5 823 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms