RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 TCERG1O14776 1098 aaKnown RBP13.15□□□□□ -0.3
COL12A1-206ENST00000474564 APBA3O96018 575 aa13.15□□□□□ -0.3
COL12A1-206ENST00000474564 PDE3AQ14432 1141 aa13.15□□□□□ -0.3
COL12A1-206ENST00000474564 SLC27A3Q5K4L6 730 aa13.15□□□□□ -0.3
COL12A1-206ENST00000474564 CCNL1Q9UK58 526 aaPredicted RBP13.15□□□□□ -0.3
COL12A1-206ENST00000474564 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
COL12A1-206ENST00000474564 ITGB4P16144 1822 aa13.14□□□□□ -0.31
COL12A1-206ENST00000474564 IRX6P78412 446 aaPredicted RBP13.14□□□□□ -0.31
COL12A1-206ENST00000474564 FKBP5Q13451 457 aaPredicted RBP13.14□□□□□ -0.31
COL12A1-206ENST00000474564 ATF7IPQ6VMQ6 1270 aa13.14□□□□□ -0.31
COL12A1-206ENST00000474564 CCDC125Q86Z20 511 aa13.14□□□□□ -0.31
COL12A1-206ENST00000474564 DNAJC10Q8IXB1 793 aa13.14□□□□□ -0.31
COL12A1-206ENST00000474564 CHPF2Q9P2E5 772 aa13.14□□□□□ -0.31
COL12A1-206ENST00000474564 TOGARAM1Q9Y4F4 1720 aa13.13□□□□□ -0.31
COL12A1-206ENST00000474564 PLSCR1O15162 318 aa13.13□□□□□ -0.31
COL12A1-206ENST00000474564 MYL6BP14649 208 aa13.13□□□□□ -0.31
COL12A1-206ENST00000474564 DZIP1LQ8IYY4 767 aaKnown RBP13.13□□□□□ -0.31
COL12A1-206ENST00000474564 ARXQ96QS3 562 aa13.13□□□□□ -0.31
COL12A1-206ENST00000474564 NHSQ6T4R5 1651 aa13.12□□□□□ -0.31
COL12A1-206ENST00000474564 A0A087WZG4 1122 aa13.12□□□□□ -0.31
COL12A1-206ENST00000474564 BAG6P46379 1132 aa13.12□□□□□ -0.31
COL12A1-206ENST00000474564 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
COL12A1-206ENST00000474564 FLIIQ13045 1269 aa13.12□□□□□ -0.31
COL12A1-206ENST00000474564 ERICH6BQ5W0A0 696 aa13.12□□□□□ -0.31
COL12A1-206ENST00000474564 KIF6Q6ZMV9 814 aa13.12□□□□□ -0.31
COL12A1-206ENST00000474564 RIC3Q7Z5B4 369 aa13.12□□□□□ -0.31
COL12A1-206ENST00000474564 CCDC87Q9NVE4 849 aa13.12□□□□□ -0.31
COL12A1-206ENST00000474564 ZNF330Q9Y3S2 320 aaPredicted RBP13.12□□□□□ -0.31
COL12A1-206ENST00000474564 RNF123Q5XPI4 1314 aa13.12□□□□□ -0.31
COL12A1-206ENST00000474564 CYP19A1P11511 503 aaPredicted RBP13.11□□□□□ -0.31
COL12A1-206ENST00000474564 AIMP1Q12904 312 aaKnown RBP13.11□□□□□ -0.31
COL12A1-206ENST00000474564 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
COL12A1-206ENST00000474564 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
COL12A1-206ENST00000474564 HDAC5Q9UQL6 1122 aa13.11□□□□□ -0.31
COL12A1-206ENST00000474564 KCPQ6ZWJ8 1503 aa13.11□□□□□ -0.31
COL12A1-206ENST00000474564 PRAMEF22A3QJZ6 481 aa13.1□□□□□ -0.31
COL12A1-206ENST00000474564 PLIN1O60240 522 aa13.1□□□□□ -0.31
COL12A1-206ENST00000474564 A1BGP04217 495 aa13.1□□□□□ -0.31
COL12A1-206ENST00000474564 IL6STP40189 918 aaPredicted RBP13.1□□□□□ -0.31
COL12A1-206ENST00000474564 CCT4P50991 539 aaKnown RBP13.1□□□□□ -0.31
COL12A1-206ENST00000474564 AAMPQ13685 434 aa13.1□□□□□ -0.31
COL12A1-206ENST00000474564 AK7Q96M32 723 aa13.1□□□□□ -0.31
COL12A1-206ENST00000474564 BRWD3Q6RI45 1802 aa13.1□□□□□ -0.31
COL12A1-206ENST00000474564 PAPPAQ13219 1627 aa13.1□□□□□ -0.31
COL12A1-206ENST00000474564 CRKLP46109 303 aaKnown RBP13.09□□□□□ -0.31
COL12A1-206ENST00000474564 SLC4A10Q6U841 1118 aa13.09□□□□□ -0.31
COL12A1-206ENST00000474564 KSR2Q6VAB6 950 aa13.09□□□□□ -0.31
COL12A1-206ENST00000474564 ANKRD13DQ6ZTN6 518 aa13.09□□□□□ -0.31
COL12A1-206ENST00000474564 COPS6Q7L5N1 327 aa13.09□□□□□ -0.31
COL12A1-206ENST00000474564 CLUAP1Q96AJ1 413 aa13.09□□□□□ -0.31
COL12A1-206ENST00000474564 UBR2Q8IWV8 1755 aa13.08□□□□□ -0.32
COL12A1-206ENST00000474564 TRIM27P14373 513 aa13.08□□□□□ -0.32
COL12A1-206ENST00000474564 TXNRD1Q16881 649 aa13.08□□□□□ -0.32
COL12A1-206ENST00000474564 ITPRIPQ8IWB1 547 aa13.08□□□□□ -0.32
COL12A1-206ENST00000474564 XAGE3Q8WTP9 111 aa13.08□□□□□ -0.32
COL12A1-206ENST00000474564 PHAXQ9H814 394 aaKnown RBP13.08□□□□□ -0.32
COL12A1-206ENST00000474564 DDX19BQ9UMR2 479 aa13.08□□□□□ -0.32
COL12A1-206ENST00000474564 RTCBQ9Y3I0 505 aaKnown RBP13.08□□□□□ -0.32
COL12A1-206ENST00000474564 CNTNAP4Q9C0A0 1308 aa13.08□□□□□ -0.32
COL12A1-206ENST00000474564 ANXA1P04083 346 aa13.07□□□□□ -0.32
COL12A1-206ENST00000474564 PDIA6Q15084 440 aa13.07□□□□□ -0.32
COL12A1-206ENST00000474564 HSP90AB3PQ58FF7 597 aa13.07□□□□□ -0.32
COL12A1-206ENST00000474564 PTF1AQ7RTS3 328 aa13.07□□□□□ -0.32
COL12A1-206ENST00000474564 PLBD2Q8NHP8 589 aa13.07□□□□□ -0.32
COL12A1-206ENST00000474564 DNAAF4Q8WXU2 420 aa13.07□□□□□ -0.32
COL12A1-206ENST00000474564 ZNF652Q9Y2D9 606 aa13.07□□□□□ -0.32
COL12A1-206ENST00000474564 BTAF1O14981 1849 aa13.06□□□□□ -0.32
COL12A1-206ENST00000474564 PI4KAP2A4QPH2 592 aa13.06□□□□□ -0.32
COL12A1-206ENST00000474564 RPS6KA4O75676 772 aa13.06□□□□□ -0.32
COL12A1-206ENST00000474564 ITPK1Q13572 414 aa13.06□□□□□ -0.32
COL12A1-206ENST00000474564 G2E3Q7L622 706 aa13.06□□□□□ -0.32
COL12A1-206ENST00000474564 PI4KAP1Q8N8J0 262 aa13.06□□□□□ -0.32
COL12A1-206ENST00000474564 FLAD1Q8NFF5 587 aa13.06□□□□□ -0.32
COL12A1-206ENST00000474564 SLC4A9Q96Q91 983 aa13.06□□□□□ -0.32
COL12A1-206ENST00000474564 MAP3K2Q9Y2U5 619 aa13.06□□□□□ -0.32
COL12A1-206ENST00000474564 SBF2Q86WG5 1849 aa13.05□□□□□ -0.32
COL12A1-206ENST00000474564 NBPF26B4DH59 902 aa13.05□□□□□ -0.32
COL12A1-206ENST00000474564 GNPATO15228 680 aa13.05□□□□□ -0.32
COL12A1-206ENST00000474564 ZPR1O75312 459 aa13.05□□□□□ -0.32
COL12A1-206ENST00000474564 MVPQ14764 893 aaKnown RBP13.05□□□□□ -0.32
COL12A1-206ENST00000474564 PROSER3Q2NL68 480 aa13.05□□□□□ -0.32
COL12A1-206ENST00000474564 TRAPPC3LQ5T215 181 aa13.05□□□□□ -0.32
COL12A1-206ENST00000474564 NBPF14Q5TI25 921 aa13.05□□□□□ -0.32
COL12A1-206ENST00000474564 NBPF10Q6P3W6 841 aaKnown RBP13.05□□□□□ -0.32
COL12A1-206ENST00000474564 INTS5Q6P9B9 1019 aaKnown RBP13.05□□□□□ -0.32
COL12A1-206ENST00000474564 DZIP3Q86Y13 1208 aaKnown RBP13.05□□□□□ -0.32
COL12A1-206ENST00000474564 NBPF15Q8N660 670 aa13.05□□□□□ -0.32
COL12A1-206ENST00000474564 LINC00116Q8NCU8 138 aa13.05□□□□□ -0.32
COL12A1-206ENST00000474564 PANK1Q8TE04 598 aa13.05□□□□□ -0.32
COL12A1-206ENST00000474564 SRCIN1Q9C0H9 1055 aa13.05□□□□□ -0.32
COL12A1-206ENST00000474564 ZBTB1Q9Y2K1 713 aa13.05□□□□□ -0.32
COL12A1-206ENST00000474564 COG6Q9Y2V7 657 aa13.05□□□□□ -0.32
COL12A1-206ENST00000474564 CACNA1FO60840 1977 aa13.05□□□□□ -0.32
COL12A1-206ENST00000474564 LAMB4A4D0S4 1761 aa13.04□□□□□ -0.32
COL12A1-206ENST00000474564 ERVV-1B6SEH8 477 aa13.04□□□□□ -0.32
COL12A1-206ENST00000474564 ADRA2BP18089 450 aa13.04□□□□□ -0.32
COL12A1-206ENST00000474564 RFC4P35249 363 aa13.04□□□□□ -0.32
COL12A1-206ENST00000474564 PIP4K2AP48426 406 aaPredicted RBP13.04□□□□□ -0.32
COL12A1-206ENST00000474564 INTS3Q68E01 1043 aaKnown RBP13.04□□□□□ -0.32
COL12A1-206ENST00000474564 ZNF831Q5JPB2 1677 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms