RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 TIMP2P16035 220 aa10.85□□□□□ -0.67
VPS50-211ENST00000474412 NR1H3Q13133 447 aa10.85□□□□□ -0.67
VPS50-211ENST00000474412 ZNF787Q6DD87 383 aa10.85□□□□□ -0.67
VPS50-211ENST00000474412 CCDC116Q8IYX3 515 aa10.85□□□□□ -0.67
VPS50-211ENST00000474412 ESF1Q9H501 851 aaKnown RBP10.85□□□□□ -0.67
VPS50-211ENST00000474412 KIF15Q9NS87 1388 aa10.85□□□□□ -0.67
VPS50-211ENST00000474412 A2ML1A8K2U0 1454 aa10.85□□□□□ -0.67
VPS50-211ENST00000474412 ADGRL2O95490 1459 aa10.85□□□□□ -0.67
VPS50-211ENST00000474412 ERBINQ96RT1 1412 aa10.84□□□□□ -0.67
VPS50-211ENST00000474412 GPR37L1O60883 481 aa10.84□□□□□ -0.67
VPS50-211ENST00000474412 ATP13A2Q9NQ11 1180 aa10.84□□□□□ -0.67
VPS50-211ENST00000474412 ZNF330Q9Y3S2 320 aaPredicted RBP10.84□□□□□ -0.67
VPS50-211ENST00000474412 ERVK-7P63135 1459 aa10.84□□□□□ -0.67
VPS50-211ENST00000474412 SYNMO15061 1565 aa10.84□□□□□ -0.67
VPS50-211ENST00000474412 IQGAP1P46940 1657 aa10.84□□□□□ -0.67
VPS50-211ENST00000474412 PLA2R1Q13018 1463 aa10.83□□□□□ -0.68
VPS50-211ENST00000474412 ZIC2O95409 532 aaPredicted RBP10.83□□□□□ -0.68
VPS50-211ENST00000474412 ITPKCQ96DU7 683 aa10.83□□□□□ -0.68
VPS50-211ENST00000474412 EFCAB6Q5THR3 1501 aa10.83□□□□□ -0.68
VPS50-211ENST00000474412 E9PCH4 1651 aa10.82□□□□□ -0.68
VPS50-211ENST00000474412 TET3O43151 1660 aa10.82□□□□□ -0.68
VPS50-211ENST00000474412 ABL2P42684 1182 aa10.82□□□□□ -0.68
VPS50-211ENST00000474412 RAB15P59190 212 aa10.82□□□□□ -0.68
VPS50-211ENST00000474412 INTS6LQ5JSJ4 861 aaKnown RBP10.82□□□□□ -0.68
VPS50-211ENST00000474412 GDPD2Q9HCC8 539 aa10.82□□□□□ -0.68
VPS50-211ENST00000474412 EMILIN1Q9Y6C2 1016 aa10.82□□□□□ -0.68
VPS50-211ENST00000474412 UGGT1Q9NYU2 1555 aa10.82□□□□□ -0.68
VPS50-211ENST00000474412 BMP1P13497 986 aa10.81□□□□□ -0.68
VPS50-211ENST00000474412 ZFAND3Q9H8U3 227 aa10.81□□□□□ -0.68
VPS50-211ENST00000474412 GMPR2Q9P2T1 348 aaKnown RBP10.81□□□□□ -0.68
VPS50-211ENST00000474412 TNRQ92752 1358 aa10.8□□□□□ -0.68
VPS50-211ENST00000474412 XIRP1Q702N8 1843 aaKnown RBP10.8□□□□□ -0.68
VPS50-211ENST00000474412 TSPY4P0CV99 314 aa10.8□□□□□ -0.68
VPS50-211ENST00000474412 TSPY10P0CW01 314 aa10.8□□□□□ -0.68
VPS50-211ENST00000474412 DHX9Q08211 1270 aaKnown RBP10.8□□□□□ -0.68
VPS50-211ENST00000474412 FLIIQ13045 1269 aa10.8□□□□□ -0.68
VPS50-211ENST00000474412 PPP1R26Q5T8A7 1209 aaPredicted RBP10.8□□□□□ -0.68
VPS50-211ENST00000474412 ZNF592Q92610 1267 aa10.8□□□□□ -0.68
VPS50-211ENST00000474412 KLF16Q9BXK1 252 aaPredicted RBP10.8□□□□□ -0.68
VPS50-211ENST00000474412 PGPEP1Q9NXJ5 209 aa10.8□□□□□ -0.68
VPS50-211ENST00000474412 PTPRTO14522 1441 aa10.8□□□□□ -0.68
VPS50-211ENST00000474412 IQGAP3Q86VI3 1631 aa10.8□□□□□ -0.68
VPS50-211ENST00000474412 POTECB2RU33 542 aa10.79□□□□□ -0.68
VPS50-211ENST00000474412 KDM5AP29375 1690 aaKnown RBP10.79□□□□□ -0.68
VPS50-211ENST00000474412 LMTK2Q8IWU2 1503 aa10.79□□□□□ -0.68
VPS50-211ENST00000474412 PPARGC1BQ86YN6 1023 aaKnown RBP10.78□□□□□ -0.68
VPS50-211ENST00000474412 SENP2Q9HC62 589 aa10.78□□□□□ -0.68
VPS50-211ENST00000474412 NLRP1Q9C000 1473 aa10.78□□□□□ -0.68
VPS50-211ENST00000474412 C11orf95C9JLR9 678 aaPredicted RBP10.77□□□□□ -0.69
VPS50-211ENST00000474412 MCCD1P59942 119 aaPredicted RBP10.77□□□□□ -0.69
VPS50-211ENST00000474412 TRIM46Q7Z4K8 759 aa10.77□□□□□ -0.69
VPS50-211ENST00000474412 RRP7BPQ9NSQ0 103 aa10.77□□□□□ -0.69
VPS50-211ENST00000474412 CHIC2Q9UKJ5 165 aa10.77□□□□□ -0.69
VPS50-211ENST00000474412 SPHKAPQ2M3C7 1700 aa10.77□□□□□ -0.69
VPS50-211ENST00000474412 WASHC2CQ9Y4E1 1318 aa10.77□□□□□ -0.69
VPS50-211ENST00000474412 IRF5Q13568 498 aa10.76□□□□□ -0.69
VPS50-211ENST00000474412 SCARF1Q14162 830 aa10.76□□□□□ -0.69
VPS50-211ENST00000474412 COG6Q9Y2V7 657 aa10.76□□□□□ -0.69
VPS50-211ENST00000474412 ANKRD30AQ9BXX3 1397 aa10.76□□□□□ -0.69
VPS50-211ENST00000474412 ADGRB3O60242 1522 aa10.75□□□□□ -0.69
VPS50-211ENST00000474412 ESPNB1AK53 854 aa10.75□□□□□ -0.69
VPS50-211ENST00000474412 RAD21O60216 631 aa10.75□□□□□ -0.69
VPS50-211ENST00000474412 FAM50AQ14320 339 aaKnown RBP10.75□□□□□ -0.69
VPS50-211ENST00000474412 MRPL14Q6P1L8 145 aaKnown RBP10.75□□□□□ -0.69
VPS50-211ENST00000474412 KIFC2Q96AC6 838 aa10.75□□□□□ -0.69
VPS50-211ENST00000474412 VAC14Q08AM6 782 aa10.74□□□□□ -0.69
VPS50-211ENST00000474412 SEPT12Q8IYM1 358 aa10.74□□□□□ -0.69
VPS50-211ENST00000474412 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.74□□□□□ -0.69
VPS50-211ENST00000474412 GIGYF1O75420 1035 aaPredicted RBP10.73□□□□□ -0.69
VPS50-211ENST00000474412 UPP2O95045 317 aa10.73□□□□□ -0.69
VPS50-211ENST00000474412 EIF4G2P78344 907 aaKnown RBP eCLIP10.73□□□□□ -0.69
VPS50-211ENST00000474412 WASHC4Q2M389 1173 aa10.73□□□□□ -0.69
VPS50-211ENST00000474412 WWC1Q8IX03 1113 aa10.73□□□□□ -0.69
VPS50-211ENST00000474412 MEIOBQ8N635 442 aa10.73□□□□□ -0.69
VPS50-211ENST00000474412 FBXO41Q8TF61 875 aa10.73□□□□□ -0.69
VPS50-211ENST00000474412 TRIM47Q96LD4 638 aa10.73□□□□□ -0.69
VPS50-211ENST00000474412 PURBQ96QR8 312 aaKnown RBP10.73□□□□□ -0.69
VPS50-211ENST00000474412 TMPRSS4Q9NRS4 437 aa10.73□□□□□ -0.69
VPS50-211ENST00000474412 ARHGAP31Q2M1Z3 1444 aa10.73□□□□□ -0.69
VPS50-211ENST00000474412 ERVH48-1M5A8F1 160 aa10.72□□□□□ -0.69
VPS50-211ENST00000474412 RNF20Q5VTR2 975 aa10.72□□□□□ -0.69
VPS50-211ENST00000474412 ZNF335Q9H4Z2 1342 aaPredicted RBP10.72□□□□□ -0.69
VPS50-211ENST00000474412 ANKRD50Q9ULJ7 1429 aa10.72□□□□□ -0.69
VPS50-211ENST00000474412 SLIT1O75093 1534 aa10.72□□□□□ -0.69
VPS50-211ENST00000474412 TMEM131LA2VDJ0 1609 aa10.72□□□□□ -0.69
VPS50-211ENST00000474412 CBLBQ13191 982 aa10.71□□□□□ -0.69
VPS50-211ENST00000474412 C6orf118Q5T5N4 469 aa10.71□□□□□ -0.69
VPS50-211ENST00000474412 LINC00528Q8N1L1 170 aa10.71□□□□□ -0.69
VPS50-211ENST00000474412 POM121Q96HA1 1249 aa10.71□□□□□ -0.69
VPS50-211ENST00000474412 ZFP42Q96MM3 310 aa10.71□□□□□ -0.69
VPS50-211ENST00000474412 ARHGAP23Q9P227 1491 aa10.71□□□□□ -0.69
VPS50-211ENST00000474412 ALKQ9UM73 1620 aa10.71□□□□□ -0.69
VPS50-211ENST00000474412 MED14O60244 1454 aa10.7□□□□□ -0.7
VPS50-211ENST00000474412 RRBP1Q9P2E9 1410 aaKnown RBP10.7□□□□□ -0.7
VPS50-211ENST00000474412 ZNF784Q8NCA9 323 aaPredicted RBP10.7□□□□□ -0.7
VPS50-211ENST00000474412 TRIM52Q96A61 297 aa10.7□□□□□ -0.7
VPS50-211ENST00000474412 IQSEC2Q5JU85 1478 aa10.69□□□□□ -0.7
VPS50-211ENST00000474412 NPHP4O75161 1426 aaPredicted RBP10.69□□□□□ -0.7
VPS50-211ENST00000474412 NOS1P29475 1434 aa10.69□□□□□ -0.7
VPS50-211ENST00000474412 BMP2P12643 396 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms