RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 CCDC30Q5VVM6 783 aa10.7□□□□□ -0.7
CNN3-205ENST00000474409 VSIG10Q8N0Z9 540 aa10.7□□□□□ -0.7
CNN3-205ENST00000474409 NECTIN2Q92692 538 aa10.7□□□□□ -0.7
CNN3-205ENST00000474409 BCL2L13Q9BXK5 485 aa10.7□□□□□ -0.7
CNN3-205ENST00000474409 KIF16BQ96L93 1317 aa10.69□□□□□ -0.7
CNN3-205ENST00000474409 LOC102724428A0A0B4J2F2 783 aa10.69□□□□□ -0.7
CNN3-205ENST00000474409 TCERG1O14776 1098 aaKnown RBP10.69□□□□□ -0.7
CNN3-205ENST00000474409 ATP6V1AP38606 617 aa10.69□□□□□ -0.7
CNN3-205ENST00000474409 RARSP54136 660 aaKnown RBP10.69□□□□□ -0.7
CNN3-205ENST00000474409 SIK1P57059 783 aa10.69□□□□□ -0.7
CNN3-205ENST00000474409 ALDH1L2Q3SY69 923 aa10.69□□□□□ -0.7
CNN3-205ENST00000474409 LAMB2P55268 1798 aa10.68□□□□□ -0.7
CNN3-205ENST00000474409 SF3B2Q13435 895 aaKnown RBP10.68□□□□□ -0.7
CNN3-205ENST00000474409 DNAJC10Q8IXB1 793 aa10.68□□□□□ -0.7
CNN3-205ENST00000474409 SSH1Q8WYL5 1049 aa10.68□□□□□ -0.7
CNN3-205ENST00000474409 CCNL1Q9UK58 526 aaPredicted RBP10.68□□□□□ -0.7
CNN3-205ENST00000474409 ERBB4Q15303 1308 aa10.67□□□□□ -0.7
CNN3-205ENST00000474409 BCAR3O75815 825 aa10.67□□□□□ -0.7
CNN3-205ENST00000474409 APBA3O96018 575 aa10.67□□□□□ -0.7
CNN3-205ENST00000474409 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.67□□□□□ -0.7
CNN3-205ENST00000474409 TEX13AQ9BXU3 409 aaPredicted RBP10.67□□□□□ -0.7
CNN3-205ENST00000474409 CHPF2Q9P2E5 772 aa10.67□□□□□ -0.7
CNN3-205ENST00000474409 STARD3NLO95772 234 aa10.66□□□□□ -0.7
CNN3-205ENST00000474409 FRAT1Q92837 279 aaPredicted RBP10.66□□□□□ -0.7
CNN3-205ENST00000474409 SLC4A9Q96Q91 983 aa10.66□□□□□ -0.7
CNN3-205ENST00000474409 DBF4Q9UBU7 674 aaPredicted RBP10.66□□□□□ -0.7
CNN3-205ENST00000474409 SUPT16HQ9Y5B9 1047 aaKnown RBP10.66□□□□□ -0.7
CNN3-205ENST00000474409 USP16Q9Y5T5 823 aa10.66□□□□□ -0.7
CNN3-205ENST00000474409 COL24A1Q17RW2 1714 aa10.66□□□□□ -0.7
CNN3-205ENST00000474409 PXDNLA1KZ92 1463 aa10.66□□□□□ -0.7
CNN3-205ENST00000474409 SLC4A2P04920 1241 aa10.65□□□□□ -0.7
CNN3-205ENST00000474409 MYL6BP14649 208 aa10.65□□□□□ -0.7
CNN3-205ENST00000474409 RRP1P56182 461 aaKnown RBP10.65□□□□□ -0.7
CNN3-205ENST00000474409 ITPK1Q13572 414 aa10.65□□□□□ -0.7
CNN3-205ENST00000474409 MRPL50Q8N5N7 158 aaKnown RBP10.65□□□□□ -0.7
CNN3-205ENST00000474409 ZNF330Q9Y3S2 320 aaPredicted RBP10.65□□□□□ -0.7
CNN3-205ENST00000474409 SPEF2Q9C093 1822 aa10.65□□□□□ -0.71
CNN3-205ENST00000474409 ANXA1P04083 346 aa10.64□□□□□ -0.71
CNN3-205ENST00000474409 CYP19A1P11511 503 aaPredicted RBP10.64□□□□□ -0.71
CNN3-205ENST00000474409 BAG6P46379 1132 aa10.64□□□□□ -0.71
CNN3-205ENST00000474409 PIP4K2AP48426 406 aaPredicted RBP10.64□□□□□ -0.71
CNN3-205ENST00000474409 SLC27A3Q5K4L6 730 aa10.64□□□□□ -0.71
CNN3-205ENST00000474409 DDX21Q9NR30 783 aaKnown RBP eCLIP10.64□□□□□ -0.71
CNN3-205ENST00000474409 HYPKQ9NX55 129 aa10.64□□□□□ -0.71
CNN3-205ENST00000474409 CACNA1SQ13698 1873 aa10.64□□□□□ -0.71
CNN3-205ENST00000474409 PTPRCP08575 1304 aa10.63□□□□□ -0.71
CNN3-205ENST00000474409 CNTNAP4Q9C0A0 1308 aa10.63□□□□□ -0.71
CNN3-205ENST00000474409 PLSCR1O15162 318 aa10.63□□□□□ -0.71
CNN3-205ENST00000474409 IPO8O15397 1037 aaKnown RBP10.63□□□□□ -0.71
CNN3-205ENST00000474409 A1BGP04217 495 aa10.63□□□□□ -0.71
CNN3-205ENST00000474409 NEFLP07196 543 aa10.63□□□□□ -0.71
CNN3-205ENST00000474409 CRKLP46109 303 aaKnown RBP10.63□□□□□ -0.71
CNN3-205ENST00000474409 KCNQ4P56696 695 aa10.63□□□□□ -0.71
CNN3-205ENST00000474409 FLIIQ13045 1269 aa10.63□□□□□ -0.71
CNN3-205ENST00000474409 FKBP5Q13451 457 aaPredicted RBP10.63□□□□□ -0.71
CNN3-205ENST00000474409 TXNRD1Q16881 649 aa10.63□□□□□ -0.71
CNN3-205ENST00000474409 PROSER3Q2NL68 480 aa10.63□□□□□ -0.71
CNN3-205ENST00000474409 ZKSCAN2Q63HK3 967 aa10.63□□□□□ -0.71
CNN3-205ENST00000474409 NPM2Q86SE8 214 aaKnown RBP10.63□□□□□ -0.71
CNN3-205ENST00000474409 FTSJ3Q8IY81 847 aaKnown RBP10.63□□□□□ -0.71
CNN3-205ENST00000474409 LINC00116Q8NCU8 138 aa10.63□□□□□ -0.71
CNN3-205ENST00000474409 CCDC87Q9NVE4 849 aa10.63□□□□□ -0.71
CNN3-205ENST00000474409 ZBTB1Q9Y2K1 713 aa10.63□□□□□ -0.71
CNN3-205ENST00000474409 COL15A1P39059 1388 aa10.63□□□□□ -0.71
CNN3-205ENST00000474409 DDX60Q8IY21 1712 aaKnown RBP10.62□□□□□ -0.71
CNN3-205ENST00000474409 PLIN1O60240 522 aa10.62□□□□□ -0.71
CNN3-205ENST00000474409 HMGB2P26583 209 aaKnown RBP10.62□□□□□ -0.71
CNN3-205ENST00000474409 BRPF1P55201 1214 aaPredicted RBP10.62□□□□□ -0.71
CNN3-205ENST00000474409 AK7Q96M32 723 aa10.62□□□□□ -0.71
CNN3-205ENST00000474409 PHAXQ9H814 394 aaKnown RBP10.62□□□□□ -0.71
CNN3-205ENST00000474409 NOB1Q9ULX3 412 aaKnown RBP10.62□□□□□ -0.71
CNN3-205ENST00000474409 NBPF26B4DH59 902 aa10.61□□□□□ -0.71
CNN3-205ENST00000474409 GNPATO15228 680 aa10.61□□□□□ -0.71
CNN3-205ENST00000474409 DDX58O95786 925 aaKnown RBP10.61□□□□□ -0.71
CNN3-205ENST00000474409 AIMP1Q12904 312 aaKnown RBP10.61□□□□□ -0.71
CNN3-205ENST00000474409 PDIA6Q15084 440 aa10.61□□□□□ -0.71
CNN3-205ENST00000474409 NBPF14Q5TI25 921 aa10.61□□□□□ -0.71
CNN3-205ENST00000474409 NBPF10Q6P3W6 841 aaKnown RBP10.61□□□□□ -0.71
CNN3-205ENST00000474409 ATF7IPQ6VMQ6 1270 aa10.61□□□□□ -0.71
CNN3-205ENST00000474409 G2E3Q7L622 706 aa10.61□□□□□ -0.71
CNN3-205ENST00000474409 CCDC125Q86Z20 511 aa10.61□□□□□ -0.71
CNN3-205ENST00000474409 NBPF15Q8N660 670 aa10.61□□□□□ -0.71
CNN3-205ENST00000474409 API5Q9BZZ5 524 aaKnown RBP10.61□□□□□ -0.71
CNN3-205ENST00000474409 RNF123Q5XPI4 1314 aa10.6□□□□□ -0.71
CNN3-205ENST00000474409 MS4A1P11836 297 aa10.6□□□□□ -0.71
CNN3-205ENST00000474409 TRIM27P14373 513 aa10.6□□□□□ -0.71
CNN3-205ENST00000474409 IL6STP40189 918 aaPredicted RBP10.6□□□□□ -0.71
CNN3-205ENST00000474409 EN1Q05925 392 aaPredicted RBP10.6□□□□□ -0.71
CNN3-205ENST00000474409 EZH2Q15910 746 aaKnown RBP10.6□□□□□ -0.71
CNN3-205ENST00000474409 KIF6Q6ZMV9 814 aa10.6□□□□□ -0.71
CNN3-205ENST00000474409 XAGE3Q8WTP9 111 aa10.6□□□□□ -0.71
CNN3-205ENST00000474409 ARHGAP45Q92619 1136 aa10.6□□□□□ -0.71
CNN3-205ENST00000474409 ARXQ96QS3 562 aa10.6□□□□□ -0.71
CNN3-205ENST00000474409 LRRC4BQ9NT99 713 aa10.6□□□□□ -0.71
CNN3-205ENST00000474409 ABCC4O15439 1325 aa10.59□□□□□ -0.71
CNN3-205ENST00000474409 INTS5Q6P9B9 1019 aaKnown RBP10.59□□□□□ -0.71
CNN3-205ENST00000474409 COPS6Q7L5N1 327 aa10.59□□□□□ -0.71
CNN3-205ENST00000474409 DZIP1LQ8IYY4 767 aaKnown RBP10.59□□□□□ -0.71
CNN3-205ENST00000474409 CLUAP1Q96AJ1 413 aa10.59□□□□□ -0.71
CNN3-205ENST00000474409 ADCY9O60503 1353 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms