RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 DNM1Q05193 864 aaKnown RBP22.26■■□□□ 1.15
ECHDC1-214ENST00000474289 LRMPQ12912 555 aa22.26■■□□□ 1.15
ECHDC1-214ENST00000474289 TTC14Q96N46 770 aa22.26■■□□□ 1.15
ECHDC1-214ENST00000474289 ATP7BP35670 1465 aa22.25■■□□□ 1.15
ECHDC1-214ENST00000474289 FAM200AQ8TCP9 573 aa22.25■■□□□ 1.15
ECHDC1-214ENST00000474289 AK2P54819 239 aa22.25■■□□□ 1.15
ECHDC1-214ENST00000474289 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.25■■□□□ 1.15
ECHDC1-214ENST00000474289 CCDC186Q7Z3E2 898 aa22.24■■□□□ 1.15
ECHDC1-214ENST00000474289 SMC3Q9UQE7 1217 aa22.24■■□□□ 1.15
ECHDC1-214ENST00000474289 EPB41L2O43491 1005 aaKnown RBP22.23■■□□□ 1.15
ECHDC1-214ENST00000474289 GNAI2P04899 355 aa22.23■■□□□ 1.15
ECHDC1-214ENST00000474289 RUFY3Q7L099 469 aa22.23■■□□□ 1.15
ECHDC1-214ENST00000474289 STAP2Q9UGK3 403 aa22.23■■□□□ 1.15
ECHDC1-214ENST00000474289 TNNT1P13805 278 aa22.22■■□□□ 1.15
ECHDC1-214ENST00000474289 SNX14Q9Y5W7 946 aa22.22■■□□□ 1.15
ECHDC1-214ENST00000474289 MORC2Q9Y6X9 1032 aaPredicted RBP22.22■■□□□ 1.15
ECHDC1-214ENST00000474289 G2E3Q7L622 706 aa22.22■■□□□ 1.15
ECHDC1-214ENST00000474289 LUZP1Q86V48 1076 aa22.22■■□□□ 1.15
ECHDC1-214ENST00000474289 LIMCH1Q9UPQ0 1083 aa22.22■■□□□ 1.15
ECHDC1-214ENST00000474289 PNMA6EA0A0J9YXQ4 647 aa22.21■■□□□ 1.15
ECHDC1-214ENST00000474289 ZBTB22O15209 634 aa22.21■■□□□ 1.15
ECHDC1-214ENST00000474289 CCT4P50991 539 aaKnown RBP22.21■■□□□ 1.15
ECHDC1-214ENST00000474289 MCM10Q7L590 875 aa22.21■■□□□ 1.15
ECHDC1-214ENST00000474289 KIF18AQ8NI77 898 aa22.21■■□□□ 1.15
ECHDC1-214ENST00000474289 RAD50Q92878 1312 aa22.21■■□□□ 1.15
ECHDC1-214ENST00000474289 NRBP1Q9UHY1 535 aa22.21■■□□□ 1.15
ECHDC1-214ENST00000474289 MTMR6Q9Y217 621 aa22.21■■□□□ 1.15
ECHDC1-214ENST00000474289 NCKAP5LQ9HCH0 1330 aa22.21■■□□□ 1.15
ECHDC1-214ENST00000474289 CCDC112Q8NEF3 446 aa22.2■■□□□ 1.14
ECHDC1-214ENST00000474289 MRVI1Q9Y6F6 885 aa22.2■■□□□ 1.14
ECHDC1-214ENST00000474289 DTNBO60941 627 aa22.2■■□□□ 1.14
ECHDC1-214ENST00000474289 AEBP1Q8IUX7 1158 aa22.2■■□□□ 1.14
ECHDC1-214ENST00000474289 LARGE1O95461 756 aa22.19■■□□□ 1.14
ECHDC1-214ENST00000474289 RASEFQ8IZ41 740 aa22.19■■□□□ 1.14
ECHDC1-214ENST00000474289 STAG3Q9UJ98 1225 aa22.19■■□□□ 1.14
ECHDC1-214ENST00000474289 PAXBP1Q9Y5B6 917 aa22.19■■□□□ 1.14
ECHDC1-214ENST00000474289 TYRO3Q06418 890 aa22.19■■□□□ 1.14
ECHDC1-214ENST00000474289 ZSCAN25Q6NSZ9 544 aa22.19■■□□□ 1.14
ECHDC1-214ENST00000474289 EDC4Q6P2E9 1401 aaKnown RBP22.19■■□□□ 1.14
ECHDC1-214ENST00000474289 AATKQ6ZMQ8 1374 aa22.18■■□□□ 1.14
ECHDC1-214ENST00000474289 GJB2P29033 226 aa22.18■■□□□ 1.14
ECHDC1-214ENST00000474289 TERF2Q15554 542 aa22.18■■□□□ 1.14
ECHDC1-214ENST00000474289 MAP3K11Q16584 847 aa22.18■■□□□ 1.14
ECHDC1-214ENST00000474289 DRC7Q8IY82 874 aa22.18■■□□□ 1.14
ECHDC1-214ENST00000474289 CAMK4Q16566 473 aa22.17■■□□□ 1.14
ECHDC1-214ENST00000474289 SGSM2O43147 1006 aa22.16■■□□□ 1.14
ECHDC1-214ENST00000474289 CCDC83Q8IWF9 413 aa22.16■■□□□ 1.14
ECHDC1-214ENST00000474289 COG3Q96JB2 828 aa22.16■■□□□ 1.14
ECHDC1-214ENST00000474289 NUP62CLQ9H1M0 184 aa22.16■■□□□ 1.14
ECHDC1-214ENST00000474289 CHMP3Q9Y3E7 222 aa22.16■■□□□ 1.14
ECHDC1-214ENST00000474289 CPS1P31327 1500 aa22.16■■□□□ 1.14
ECHDC1-214ENST00000474289 CPA1P15085 419 aa22.16■■□□□ 1.14
ECHDC1-214ENST00000474289 PLA2G4DQ86XP0 818 aa22.16■■□□□ 1.14
ECHDC1-214ENST00000474289 CBX8Q9HC52 389 aa22.16■■□□□ 1.14
ECHDC1-214ENST00000474289 AOX1Q06278 1338 aa22.15■■□□□ 1.14
ECHDC1-214ENST00000474289 NEO1Q92859 1461 aa22.15■■□□□ 1.14
ECHDC1-214ENST00000474289 MAP4K4O95819 1239 aaPredicted RBP22.15■■□□□ 1.14
ECHDC1-214ENST00000474289 KRT222Q8N1A0 295 aa22.15■■□□□ 1.14
ECHDC1-214ENST00000474289 RTF1Q92541 710 aaKnown RBP22.15■■□□□ 1.14
ECHDC1-214ENST00000474289 LIG1P18858 919 aa22.15■■□□□ 1.14
ECHDC1-214ENST00000474289 ZNF75DP51815 510 aa22.15■■□□□ 1.14
ECHDC1-214ENST00000474289 ATP8B2P98198 1209 aa22.15■■□□□ 1.14
ECHDC1-214ENST00000474289 TPD52L1Q16890 204 aaPredicted RBP22.15■■□□□ 1.14
ECHDC1-214ENST00000474289 TTC6Q86TZ1 520 aa22.15■■□□□ 1.14
ECHDC1-214ENST00000474289 TRIM5Q9C035 493 aa22.15■■□□□ 1.14
ECHDC1-214ENST00000474289 LSG1Q9H089 658 aaKnown RBP22.15■■□□□ 1.14
ECHDC1-214ENST00000474289 VPS37CA5D8V6 355 aaPredicted RBP22.14■■□□□ 1.13
ECHDC1-214ENST00000474289 ANO6Q4KMQ2 910 aa22.14■■□□□ 1.13
ECHDC1-214ENST00000474289 BCL11BQ9C0K0 894 aaPredicted RBP22.14■■□□□ 1.13
ECHDC1-214ENST00000474289 IL1RAPL2Q9NP60 686 aa22.14■■□□□ 1.13
ECHDC1-214ENST00000474289 PDE4CQ08493 712 aa22.14■■□□□ 1.13
ECHDC1-214ENST00000474289 KMT5BQ4FZB7 885 aa22.14■■□□□ 1.13
ECHDC1-214ENST00000474289 SULT6B1Q6IMI4 303 aa22.14■■□□□ 1.13
ECHDC1-214ENST00000474289 CKAP2LQ8IYA6 745 aa22.14■■□□□ 1.13
ECHDC1-214ENST00000474289 HYPKQ9NX55 129 aa22.14■■□□□ 1.13
ECHDC1-214ENST00000474289 MIS18AQ9NYP9 233 aa22.14■■□□□ 1.13
ECHDC1-214ENST00000474289 WASLO00401 505 aaPredicted RBP22.13■■□□□ 1.13
ECHDC1-214ENST00000474289 CASTP20810 708 aaKnown RBP22.13■■□□□ 1.13
ECHDC1-214ENST00000474289 CACTINQ8WUQ7 758 aaKnown RBP22.13■■□□□ 1.13
ECHDC1-214ENST00000474289 CCDC66A2RUB6 948 aa22.12■■□□□ 1.13
ECHDC1-214ENST00000474289 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.12■■□□□ 1.13
ECHDC1-214ENST00000474289 RICTORQ6R327 1708 aa22.12■■□□□ 1.13
ECHDC1-214ENST00000474289 KCNJ4P48050 445 aa22.12■■□□□ 1.13
ECHDC1-214ENST00000474289 CEP135Q66GS9 1140 aa22.12■■□□□ 1.13
ECHDC1-214ENST00000474289 NUTM1Q86Y26 1132 aa22.12■■□□□ 1.13
ECHDC1-214ENST00000474289 ZNF397Q8NF99 534 aaPredicted RBP22.12■■□□□ 1.13
ECHDC1-214ENST00000474289 ZNF592Q92610 1267 aa22.12■■□□□ 1.13
ECHDC1-214ENST00000474289 DLC1Q96QB1 1528 aa22.12■■□□□ 1.13
ECHDC1-214ENST00000474289 IRX5P78411 483 aaPredicted RBP22.11■■□□□ 1.13
ECHDC1-214ENST00000474289 RIMBP3CA6NJZ7 1639 aa22.11■■□□□ 1.13
ECHDC1-214ENST00000474289 RIMBP3BA6NNM3 1639 aa22.11■■□□□ 1.13
ECHDC1-214ENST00000474289 RIMBP3Q9UFD9 1639 aa22.11■■□□□ 1.13
ECHDC1-214ENST00000474289 GNAI3P08754 354 aa22.11■■□□□ 1.13
ECHDC1-214ENST00000474289 CRB1P82279 1406 aa22.11■■□□□ 1.13
ECHDC1-214ENST00000474289 VGLL3A8MV65 326 aa22.1■■□□□ 1.13
ECHDC1-214ENST00000474289 TNMDQ9H2S6 317 aa22.1■■□□□ 1.13
ECHDC1-214ENST00000474289 KRT85P78386 507 aa22.1■■□□□ 1.13
ECHDC1-214ENST00000474289 ST3GAL1Q11201 340 aa22.1■■□□□ 1.13
ECHDC1-214ENST00000474289 EIF4A2Q14240 407 aaKnown RBP22.1■■□□□ 1.13
ECHDC1-214ENST00000474289 CCDC144BQ3MJ40 725 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms