RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 CANXP27824 592 aaKnown RBP26.49■■□□□ 1.83
TMEM54-204ENST00000474144 RTF1Q92541 710 aaKnown RBP26.49■■□□□ 1.83
TMEM54-204ENST00000474144 C10orf71Q711Q0 1435 aa26.48■■□□□ 1.83
TMEM54-204ENST00000474144 N4BP2Q86UW6 1770 aaPredicted RBP26.48■■□□□ 1.83
TMEM54-204ENST00000474144 COL15A1P39059 1388 aa26.48■■□□□ 1.83
TMEM54-204ENST00000474144 DDR1Q08345 913 aa26.48■■□□□ 1.83
TMEM54-204ENST00000474144 PXDNLA1KZ92 1463 aa26.48■■□□□ 1.83
TMEM54-204ENST00000474144 ZPR1O75312 459 aa26.47■■□□□ 1.83
TMEM54-204ENST00000474144 PLEKHF1Q96S99 279 aa26.47■■□□□ 1.83
TMEM54-204ENST00000474144 STARD3NLO95772 234 aa26.46■■□□□ 1.83
TMEM54-204ENST00000474144 RALBP1Q15311 655 aa26.46■■□□□ 1.83
TMEM54-204ENST00000474144 FMNL2Q96PY5 1086 aa26.46■■□□□ 1.83
TMEM54-204ENST00000474144 DLG5Q8TDM6 1919 aa26.45■■□□□ 1.83
TMEM54-204ENST00000474144 A0A0G2JLW4 131 aa26.45■■□□□ 1.82
TMEM54-204ENST00000474144 NARFQ9UHQ1 456 aa26.45■■□□□ 1.82
TMEM54-204ENST00000474144 TM4SF1P30408 202 aa26.44■■□□□ 1.82
TMEM54-204ENST00000474144 BCL2L12Q9HB09 334 aa26.44■■□□□ 1.82
TMEM54-204ENST00000474144 HTATSF1O43719 755 aaKnown RBP26.43■■□□□ 1.82
TMEM54-204ENST00000474144 EIF5P55010 431 aaKnown RBP26.43■■□□□ 1.82
TMEM54-204ENST00000474144 TGFB2P61812 414 aa26.43■■□□□ 1.82
TMEM54-204ENST00000474144 PRAMEF22A3QJZ6 481 aa26.42■■□□□ 1.82
TMEM54-204ENST00000474144 POLRMTO00411 1230 aaKnown RBP26.42■■□□□ 1.82
TMEM54-204ENST00000474144 A1BGP04217 495 aa26.42■■□□□ 1.82
TMEM54-204ENST00000474144 DPEP1P16444 411 aa26.42■■□□□ 1.82
TMEM54-204ENST00000474144 TEX13AQ9BXU3 409 aaPredicted RBP26.42■■□□□ 1.82
TMEM54-204ENST00000474144 NEFMP07197 916 aa26.4■■□□□ 1.82
TMEM54-204ENST00000474144 NFIXQ14938 502 aa26.4■■□□□ 1.82
TMEM54-204ENST00000474144 USP16Q9Y5T5 823 aa26.4■■□□□ 1.82
TMEM54-204ENST00000474144 MIS18AQ9NYP9 233 aa26.39■■□□□ 1.82
TMEM54-204ENST00000474144 ZNF330Q9Y3S2 320 aaPredicted RBP26.39■■□□□ 1.82
TMEM54-204ENST00000474144 NFE2L2Q16236 605 aa26.38■■□□□ 1.81
TMEM54-204ENST00000474144 KCNA3P22001 575 aa26.37■■□□□ 1.81
TMEM54-204ENST00000474144 PIP4K2AP48426 406 aaPredicted RBP26.37■■□□□ 1.81
TMEM54-204ENST00000474144 AFDNP55196 1824 aaKnown RBP26.37■■□□□ 1.81
TMEM54-204ENST00000474144 MYBBP1AQ9BQG0 1328 aaKnown RBP26.37■■□□□ 1.81
TMEM54-204ENST00000474144 TAF7Q15545 349 aaPredicted RBP26.36■■□□□ 1.81
TMEM54-204ENST00000474144 THUMPD2Q9BTF0 503 aaKnown RBP26.36■■□□□ 1.81
TMEM54-204ENST00000474144 TBC1D2BQ9UPU7 963 aa26.36■■□□□ 1.81
TMEM54-204ENST00000474144 BCS1LQ9Y276 419 aa26.36■■□□□ 1.81
TMEM54-204ENST00000474144 BRCA1P38398 1863 aaKnown RBP26.36■■□□□ 1.81
TMEM54-204ENST00000474144 A0A087WZG4 1122 aa26.35■■□□□ 1.81
TMEM54-204ENST00000474144 IL6STP40189 918 aaPredicted RBP26.35■■□□□ 1.81
TMEM54-204ENST00000474144 MAPK8IP3Q9UPT6 1336 aa26.35■■□□□ 1.81
TMEM54-204ENST00000474144 SNRPA1P09661 255 aaKnown RBP26.34■■□□□ 1.81
TMEM54-204ENST00000474144 PNNQ9H307 717 aaKnown RBP26.34■■□□□ 1.81
TMEM54-204ENST00000474144 NRXN2Q9P2S2 1712 aa26.34■■□□□ 1.81
TMEM54-204ENST00000474144 BICDL1Q6ZP65 573 aa26.33■■□□□ 1.81
TMEM54-204ENST00000474144 SCN7AQ01118 1682 aa26.33■■□□□ 1.81
TMEM54-204ENST00000474144 SERPINB2P05120 415 aa26.32■■□□□ 1.8
TMEM54-204ENST00000474144 CHRNA5P30532 468 aa26.32■■□□□ 1.8
TMEM54-204ENST00000474144 TBC1D9BQ66K14 1250 aa26.32■■□□□ 1.8
TMEM54-204ENST00000474144 KDM3BQ7LBC6 1761 aa26.31■■□□□ 1.8
TMEM54-204ENST00000474144 PIM2Q9P1W9 311 aa26.29■■□□□ 1.8
TMEM54-204ENST00000474144 CAMTA2O94983 1202 aa26.28■■□□□ 1.8
TMEM54-204ENST00000474144 ATP10DQ9P241 1426 aa26.28■■□□□ 1.8
TMEM54-204ENST00000474144 NBPF26B4DH59 902 aa26.27■■□□□ 1.8
TMEM54-204ENST00000474144 RIPK4P57078 832 aa26.27■■□□□ 1.8
TMEM54-204ENST00000474144 NBPF10Q6P3W6 841 aaKnown RBP26.27■■□□□ 1.8
TMEM54-204ENST00000474144 DZIP3Q86Y13 1208 aaKnown RBP26.27■■□□□ 1.8
TMEM54-204ENST00000474144 CCDC146Q8IYE0 955 aa26.27■■□□□ 1.8
TMEM54-204ENST00000474144 NBPF15Q8N660 670 aa26.27■■□□□ 1.8
TMEM54-204ENST00000474144 PNISRQ8TF01 805 aaKnown RBP26.27■■□□□ 1.8
TMEM54-204ENST00000474144 ADCY9O60503 1353 aa26.27■■□□□ 1.8
TMEM54-204ENST00000474144 CARMIL3Q8ND23 1372 aa26.27■■□□□ 1.8
TMEM54-204ENST00000474144 BCORQ6W2J9 1755 aa26.27■■□□□ 1.8
TMEM54-204ENST00000474144 ARHGAP27Q6ZUM4 889 aa26.26■■□□□ 1.79
TMEM54-204ENST00000474144 NPM2Q86SE8 214 aaKnown RBP26.26■■□□□ 1.79
TMEM54-204ENST00000474144 PRKRIP1Q9H875 184 aaPredicted RBP26.26■■□□□ 1.79
TMEM54-204ENST00000474144 ARFGEF1Q9Y6D6 1849 aa26.25■■□□□ 1.79
TMEM54-204ENST00000474144 LAMB4A4D0S4 1761 aa26.25■■□□□ 1.79
TMEM54-204ENST00000474144 TMPOP42166 694 aaKnown RBP26.24■■□□□ 1.79
TMEM54-204ENST00000474144 EIF4A1P60842 406 aaKnown RBP26.24■■□□□ 1.79
TMEM54-204ENST00000474144 DALRD3Q5D0E6 543 aaKnown RBP26.24■■□□□ 1.79
TMEM54-204ENST00000474144 RRP7AQ9Y3A4 280 aaKnown RBP26.24■■□□□ 1.79
TMEM54-204ENST00000474144 GIGYF1O75420 1035 aaPredicted RBP26.23■■□□□ 1.79
TMEM54-204ENST00000474144 CCDC24Q8N4L8 307 aa26.23■■□□□ 1.79
TMEM54-204ENST00000474144 ZNF526Q8TF50 670 aaPredicted RBP26.22■■□□□ 1.79
TMEM54-204ENST00000474144 ADAMTS8Q9UP79 889 aa26.21■■□□□ 1.79
TMEM54-204ENST00000474144 ANKRD31Q8N7Z5 1873 aa26.21■■□□□ 1.79
TMEM54-204ENST00000474144 WDR43Q15061 677 aaKnown RBP eCLIP26.2■■□□□ 1.78
TMEM54-204ENST00000474144 NEUROD2Q15784 382 aa26.2■■□□□ 1.78
TMEM54-204ENST00000474144 SETDB2Q96T68 719 aa26.2■■□□□ 1.78
TMEM54-204ENST00000474144 DLEC1Q9Y238 1755 aa26.2■■□□□ 1.78
TMEM54-204ENST00000474144 ZEB1P37275 1124 aaPredicted RBP26.19■■□□□ 1.78
TMEM54-204ENST00000474144 PRR5LQ6MZQ0 368 aa26.19■■□□□ 1.78
TMEM54-204ENST00000474144 C2CD5Q86YS7 1000 aa26.19■■□□□ 1.78
TMEM54-204ENST00000474144 TSPYL4Q9UJ04 414 aa26.19■■□□□ 1.78
TMEM54-204ENST00000474144 C1QTNF8P60827 252 aa26.17■■□□□ 1.78
TMEM54-204ENST00000474144 NGEFQ8N5V2 710 aa26.17■■□□□ 1.78
TMEM54-204ENST00000474144 RUNDC1Q96C34 613 aa26.17■■□□□ 1.78
TMEM54-204ENST00000474144 GPBP1L1Q9HC44 474 aaPredicted RBP26.16■■□□□ 1.78
TMEM54-204ENST00000474144 H0YIN7 160 aa26.15■■□□□ 1.78
TMEM54-204ENST00000474144 HLFQ16534 295 aa26.15■■□□□ 1.78
TMEM54-204ENST00000474144 CLEC4GQ6UXB4 293 aa26.15■■□□□ 1.78
TMEM54-204ENST00000474144 LMOD3Q0VAK6 560 aa26.14■■□□□ 1.78
TMEM54-204ENST00000474144 CNBD1Q8NA66 436 aa26.14■■□□□ 1.78
TMEM54-204ENST00000474144 BRIP1Q9BX63 1249 aa26.14■■□□□ 1.78
TMEM54-204ENST00000474144 TRIM35Q9UPQ4 493 aa26.14■■□□□ 1.78
TMEM54-204ENST00000474144 COL11A2P13942 1736 aaPredicted RBP26.14■■□□□ 1.77
TMEM54-204ENST00000474144 ZNF652Q9Y2D9 606 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms