RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 SBF1O95248 1867 aa27.6■■■□□ 2.01
APP-215ENST00000474136 NFIXQ14938 502 aa27.59■■■□□ 2.01
APP-215ENST00000474136 TNRC6CQ9HCJ0 1690 aaKnown RBP27.58■■■□□ 2.01
APP-215ENST00000474136 TNS4Q8IZW8 715 aa27.58■■■□□ 2.01
APP-215ENST00000474136 MORC1Q86VD1 984 aa27.57■■■□□ 2
APP-215ENST00000474136 LGR6Q9HBX8 967 aa27.57■■■□□ 2
APP-215ENST00000474136 CYP19A1P11511 503 aaPredicted RBP27.56■■■□□ 2
APP-215ENST00000474136 LMNB1P20700 586 aa27.56■■■□□ 2
APP-215ENST00000474136 SLC39A6Q13433 755 aa27.56■■■□□ 2
APP-215ENST00000474136 GLTPD2A6NH11 291 aa27.55■■■□□ 2
APP-215ENST00000474136 IL13P35225 146 aa27.55■■■□□ 2
APP-215ENST00000474136 SLC52A2Q9HAB3 445 aa27.55■■■□□ 2
APP-215ENST00000474136 BCL2L12Q9HB09 334 aa27.55■■■□□ 2
APP-215ENST00000474136 NARFQ9UHQ1 456 aa27.55■■■□□ 2
APP-215ENST00000474136 ZC3H4Q9UPT8 1303 aaKnown RBP27.55■■■□□ 2
APP-215ENST00000474136 SERPINB2P05120 415 aa27.53■■■□□ 2
APP-215ENST00000474136 VEGFAP15692 232 aaPredicted RBP27.53■■■□□ 2
APP-215ENST00000474136 AKAP4Q5JQC9 854 aa27.53■■■□□ 2
APP-215ENST00000474136 ZBTB1Q9Y2K1 713 aa27.53■■■□□ 2
APP-215ENST00000474136 COL15A1P39059 1388 aa27.53■■■□□ 2
APP-215ENST00000474136 C2CD5Q86YS7 1000 aa27.51■■□□□ 1.99
APP-215ENST00000474136 TTLL6Q8N841 843 aa27.51■■□□□ 1.99
APP-215ENST00000474136 SCN11AQ9UI33 1791 aa27.51■■□□□ 1.99
APP-215ENST00000474136 NFKBIEO00221 500 aa27.5■■□□□ 1.99
APP-215ENST00000474136 RNMTO43148 476 aaKnown RBP27.5■■□□□ 1.99
APP-215ENST00000474136 HSPA1AP0DMV8 641 aaKnown RBP27.5■■□□□ 1.99
APP-215ENST00000474136 HSPA1BP0DMV9 641 aaKnown RBP27.5■■□□□ 1.99
APP-215ENST00000474136 CARMIL3Q8ND23 1372 aa27.5■■□□□ 1.99
APP-215ENST00000474136 AFDNP55196 1824 aaKnown RBP27.5■■□□□ 1.99
APP-215ENST00000474136 NRXN2Q9P2S2 1712 aa27.48■■□□□ 1.99
APP-215ENST00000474136 POTECB2RU33 542 aa27.47■■□□□ 1.99
APP-215ENST00000474136 HSPA5P11021 654 aaKnown RBP27.47■■□□□ 1.99
APP-215ENST00000474136 BICDL1Q6ZP65 573 aa27.46■■□□□ 1.99
APP-215ENST00000474136 MRC1P22897 1456 aa27.46■■□□□ 1.99
APP-215ENST00000474136 H0YIN7 160 aa27.45■■□□□ 1.99
APP-215ENST00000474136 CANXP27824 592 aaKnown RBP27.45■■□□□ 1.99
APP-215ENST00000474136 HMOX1P09601 288 aa27.44■■□□□ 1.98
APP-215ENST00000474136 EIF4G2P78344 907 aaKnown RBP eCLIP27.43■■□□□ 1.98
APP-215ENST00000474136 DLEC1Q9Y238 1755 aa27.43■■□□□ 1.98
APP-215ENST00000474136 ZNF219Q9P2Y4 722 aaPredicted RBP27.42■■□□□ 1.98
APP-215ENST00000474136 TIAM2Q8IVF5 1701 aa27.41■■□□□ 1.98
APP-215ENST00000474136 MTHFSDQ2M296 383 aaKnown RBP27.41■■□□□ 1.98
APP-215ENST00000474136 CCDC24Q8N4L8 307 aa27.41■■□□□ 1.98
APP-215ENST00000474136 ZNF622Q969S3 477 aaKnown RBP eCLIP27.41■■□□□ 1.98
APP-215ENST00000474136 KNSTRNQ9Y448 316 aa27.41■■□□□ 1.98
APP-215ENST00000474136 TBC1D9BQ66K14 1250 aa27.4■■□□□ 1.98
APP-215ENST00000474136 VSIG10Q8N0Z9 540 aa27.4■■□□□ 1.98
APP-215ENST00000474136 C21orf2O43822 256 aa27.39■■□□□ 1.97
APP-215ENST00000474136 EIF5P55010 431 aaKnown RBP27.39■■□□□ 1.97
APP-215ENST00000474136 DPY19L2Q6NUT2 758 aa27.39■■□□□ 1.97
APP-215ENST00000474136 CCDC88AQ3V6T2 1871 aa27.37■■□□□ 1.97
APP-215ENST00000474136 ERFEQ4G0M1 354 aa27.37■■□□□ 1.97
APP-215ENST00000474136 POTEIP0CG38 1075 aa27.35■■□□□ 1.97
APP-215ENST00000474136 POTEJP0CG39 1038 aa27.35■■□□□ 1.97
APP-215ENST00000474136 AMER1Q5JTC6 1135 aaPredicted RBP27.35■■□□□ 1.97
APP-215ENST00000474136 PRR5LQ6MZQ0 368 aa27.35■■□□□ 1.97
APP-215ENST00000474136 STARD3NLO95772 234 aa27.34■■□□□ 1.97
APP-215ENST00000474136 BRIP1Q9BX63 1249 aa27.34■■□□□ 1.97
APP-215ENST00000474136 MKRN1Q9UHC7 482 aaKnown RBP27.34■■□□□ 1.97
APP-215ENST00000474136 TBC1D2BQ9UPU7 963 aa27.34■■□□□ 1.97
APP-215ENST00000474136 A0A087WZG4 1122 aa27.33■■□□□ 1.97
APP-215ENST00000474136 ZNF330Q9Y3S2 320 aaPredicted RBP27.33■■□□□ 1.97
APP-215ENST00000474136 PDE6BP35913 854 aa27.32■■□□□ 1.96
APP-215ENST00000474136 TTC5Q8N0Z6 440 aa27.32■■□□□ 1.96
APP-215ENST00000474136 ANKRD31Q8N7Z5 1873 aa27.32■■□□□ 1.96
APP-215ENST00000474136 ZNF496Q96IT1 587 aaPredicted RBP27.32■■□□□ 1.96
APP-215ENST00000474136 DDNO94850 711 aaPredicted RBP27.31■■□□□ 1.96
APP-215ENST00000474136 CHADLQ6NUI6 762 aa27.31■■□□□ 1.96
APP-215ENST00000474136 CREBZFQ9NS37 354 aa27.3■■□□□ 1.96
APP-215ENST00000474136 UBR2Q8IWV8 1755 aa27.3■■□□□ 1.96
APP-215ENST00000474136 VIRMAQ69YN4 1812 aaKnown RBP27.29■■□□□ 1.96
APP-215ENST00000474136 TAOK3Q9H2K8 898 aa27.29■■□□□ 1.96
APP-215ENST00000474136 PDZRN3Q9UPQ7 1066 aa27.29■■□□□ 1.96
APP-215ENST00000474136 COL11A2P13942 1736 aaPredicted RBP27.28■■□□□ 1.96
APP-215ENST00000474136 LTBP3Q9NS15 1303 aa27.28■■□□□ 1.96
APP-215ENST00000474136 HEG1Q9ULI3 1381 aa27.28■■□□□ 1.96
APP-215ENST00000474136 DIAPH1O60610 1272 aaKnown RBP27.27■■□□□ 1.96
APP-215ENST00000474136 ZNF790Q6PG37 636 aa27.26■■□□□ 1.95
APP-215ENST00000474136 IL17REQ8NFR9 667 aa27.26■■□□□ 1.95
APP-215ENST00000474136 FER1L6Q2WGJ9 1857 aa27.26■■□□□ 1.95
APP-215ENST00000474136 A1BGP04217 495 aa27.25■■□□□ 1.95
APP-215ENST00000474136 CAMTA2O94983 1202 aa27.24■■□□□ 1.95
APP-215ENST00000474136 IL6STP40189 918 aaPredicted RBP27.24■■□□□ 1.95
APP-215ENST00000474136 PRPF40BQ6NWY9 871 aaKnown RBP27.24■■□□□ 1.95
APP-215ENST00000474136 CNBD1Q8NA66 436 aa27.24■■□□□ 1.95
APP-215ENST00000474136 CNKSR1Q969H4 720 aa27.24■■□□□ 1.95
APP-215ENST00000474136 SCN7AQ01118 1682 aa27.24■■□□□ 1.95
APP-215ENST00000474136 DICER1Q9UPY3 1922 aaKnown RBP27.23■■□□□ 1.95
APP-215ENST00000474136 FOXN1O15353 648 aa27.23■■□□□ 1.95
APP-215ENST00000474136 SRGNP10124 158 aa27.23■■□□□ 1.95
APP-215ENST00000474136 TEFQ10587 303 aa27.23■■□□□ 1.95
APP-215ENST00000474136 STYK1Q6J9G0 422 aa27.23■■□□□ 1.95
APP-215ENST00000474136 SETDB2Q96T68 719 aa27.23■■□□□ 1.95
APP-215ENST00000474136 TEX13AQ9BXU3 409 aaPredicted RBP27.23■■□□□ 1.95
APP-215ENST00000474136 NPHP1O15259 732 aa27.22■■□□□ 1.95
APP-215ENST00000474136 SLX4Q8IY92 1834 aa27.21■■□□□ 1.95
APP-215ENST00000474136 CNTNAP1P78357 1384 aa27.21■■□□□ 1.95
APP-215ENST00000474136 PASKQ96RG2 1323 aa27.2■■□□□ 1.94
APP-215ENST00000474136 GNAT3A8MTJ3 354 aa27.19■■□□□ 1.94
APP-215ENST00000474136 KCNQ3O43525 872 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms