RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 HSPA6P17066 643 aa18.11■□□□□ 0.49
COPS7B-219ENST00000474042 VSIG10Q8N0Z9 540 aa18.11■□□□□ 0.49
COPS7B-219ENST00000474042 ZBTB1Q9Y2K1 713 aa18.11■□□□□ 0.49
COPS7B-219ENST00000474042 SBF1O95248 1867 aa18.11■□□□□ 0.49
COPS7B-219ENST00000474042 USPL1Q5W0Q7 1092 aa18.1■□□□□ 0.49
COPS7B-219ENST00000474042 ZPR1O75312 459 aa18.09■□□□□ 0.49
COPS7B-219ENST00000474042 ARHGAP27Q6ZUM4 889 aa18.09■□□□□ 0.49
COPS7B-219ENST00000474042 PIM2Q9P1W9 311 aa18.09■□□□□ 0.49
COPS7B-219ENST00000474042 NARFQ9UHQ1 456 aa18.09■□□□□ 0.49
COPS7B-219ENST00000474042 TNRC6CQ9HCJ0 1690 aaKnown RBP18.07■□□□□ 0.48
COPS7B-219ENST00000474042 CHRNA5P30532 468 aa18.07■□□□□ 0.48
COPS7B-219ENST00000474042 NFIXQ14938 502 aa18.07■□□□□ 0.48
COPS7B-219ENST00000474042 DALRD3Q5D0E6 543 aaKnown RBP18.07■□□□□ 0.48
COPS7B-219ENST00000474042 BCL2L12Q9HB09 334 aa18.07■□□□□ 0.48
COPS7B-219ENST00000474042 ANKRD31Q8N7Z5 1873 aa18.07■□□□□ 0.48
COPS7B-219ENST00000474042 BCORQ6W2J9 1755 aa18.07■□□□□ 0.48
COPS7B-219ENST00000474042 GAS2L2Q8NHY3 880 aa18.06■□□□□ 0.48
COPS7B-219ENST00000474042 CEMIPQ8WUJ3 1361 aa18.05■□□□□ 0.48
COPS7B-219ENST00000474042 HEG1Q9ULI3 1381 aa18.05■□□□□ 0.48
COPS7B-219ENST00000474042 C9orf131Q5VYM1 1079 aa18.05■□□□□ 0.48
COPS7B-219ENST00000474042 COL11A2P13942 1736 aaPredicted RBP18.04■□□□□ 0.48
COPS7B-219ENST00000474042 GNAT3A8MTJ3 354 aa18.04■□□□□ 0.48
COPS7B-219ENST00000474042 U2SURPO15042 1029 aaKnown RBP18.04■□□□□ 0.48
COPS7B-219ENST00000474042 TTC5Q8N0Z6 440 aa18.04■□□□□ 0.48
COPS7B-219ENST00000474042 IL17REQ8NFR9 667 aa18.04■□□□□ 0.48
COPS7B-219ENST00000474042 CARMIL3Q8ND23 1372 aa18.04■□□□□ 0.48
COPS7B-219ENST00000474042 TIAM2Q8IVF5 1701 aa18.03■□□□□ 0.48
COPS7B-219ENST00000474042 EIF5P55010 431 aaKnown RBP18.03■□□□□ 0.48
COPS7B-219ENST00000474042 ZNF496Q96IT1 587 aaPredicted RBP18.03■□□□□ 0.48
COPS7B-219ENST00000474042 NMRK2Q9NPI5 230 aa18.03■□□□□ 0.48
COPS7B-219ENST00000474042 TOMM70O94826 608 aa18.02■□□□□ 0.48
COPS7B-219ENST00000474042 STARD3NLO95772 234 aa18.02■□□□□ 0.48
COPS7B-219ENST00000474042 TEFQ10587 303 aa18.02■□□□□ 0.48
COPS7B-219ENST00000474042 ZNF790Q6PG37 636 aa18.02■□□□□ 0.48
COPS7B-219ENST00000474042 WDR90Q96KV7 1748 aa18.02■□□□□ 0.48
COPS7B-219ENST00000474042 RSPH6AQ9H0K4 717 aa18.02■□□□□ 0.48
COPS7B-219ENST00000474042 SERPINB2P05120 415 aa18.01■□□□□ 0.47
COPS7B-219ENST00000474042 CANXP27824 592 aaKnown RBP18.01■□□□□ 0.47
COPS7B-219ENST00000474042 CNGB1Q14028 1251 aaPredicted RBP18■□□□□ 0.47
COPS7B-219ENST00000474042 RNF181Q9P0P0 153 aa18■□□□□ 0.47
COPS7B-219ENST00000474042 CCDC88AQ3V6T2 1871 aa17.99■□□□□ 0.47
COPS7B-219ENST00000474042 A0A087WZG4 1122 aa17.99■□□□□ 0.47
COPS7B-219ENST00000474042 PRKAR2BP31323 418 aa17.99■□□□□ 0.47
COPS7B-219ENST00000474042 TEX13AQ9BXU3 409 aaPredicted RBP17.99■□□□□ 0.47
COPS7B-219ENST00000474042 ARFGEF2Q9Y6D5 1785 aa17.99■□□□□ 0.47
COPS7B-219ENST00000474042 PHACTR3Q96KR7 559 aa17.98■□□□□ 0.47
COPS7B-219ENST00000474042 CFAP53Q96M91 514 aa17.98■□□□□ 0.47
COPS7B-219ENST00000474042 ZC3H4Q9UPT8 1303 aaKnown RBP17.98■□□□□ 0.47
COPS7B-219ENST00000474042 FER1L6Q2WGJ9 1857 aa17.97■□□□□ 0.47
COPS7B-219ENST00000474042 IL6STP40189 918 aaPredicted RBP17.97■□□□□ 0.47
COPS7B-219ENST00000474042 APLP1P51693 650 aa17.97■□□□□ 0.47
COPS7B-219ENST00000474042 RASSF7Q02833 373 aa17.97■□□□□ 0.47
COPS7B-219ENST00000474042 RBM46Q8TBY0 533 aaKnown RBP17.97■□□□□ 0.47
COPS7B-219ENST00000474042 FMNL2Q96PY5 1086 aa17.97■□□□□ 0.47
COPS7B-219ENST00000474042 KDM2BQ8NHM5 1336 aa17.97■□□□□ 0.47
COPS7B-219ENST00000474042 LAMB4A4D0S4 1761 aa17.96■□□□□ 0.47
COPS7B-219ENST00000474042 TBC1D9BQ66K14 1250 aa17.96■□□□□ 0.47
COPS7B-219ENST00000474042 CACNA1SQ13698 1873 aa17.95■□□□□ 0.46
COPS7B-219ENST00000474042 PRELPP51888 382 aa17.95■□□□□ 0.46
COPS7B-219ENST00000474042 BICDL1Q6ZP65 573 aa17.95■□□□□ 0.46
COPS7B-219ENST00000474042 C2CD5Q86YS7 1000 aa17.95■□□□□ 0.46
COPS7B-219ENST00000474042 TTLL6Q8N841 843 aa17.95■□□□□ 0.46
COPS7B-219ENST00000474042 DICER1Q9UPY3 1922 aaKnown RBP17.95■□□□□ 0.46
COPS7B-219ENST00000474042 KCNQ3O43525 872 aa17.94■□□□□ 0.46
COPS7B-219ENST00000474042 PPP2R1AP30153 589 aa17.94■□□□□ 0.46
COPS7B-219ENST00000474042 BTBD11A6QL63 1104 aa17.93■□□□□ 0.46
COPS7B-219ENST00000474042 H0YIN7 160 aa17.93■□□□□ 0.46
COPS7B-219ENST00000474042 CAMTA2O94983 1202 aa17.93■□□□□ 0.46
COPS7B-219ENST00000474042 A1BGP04217 495 aa17.93■□□□□ 0.46
COPS7B-219ENST00000474042 LMNB1P20700 586 aa17.93■□□□□ 0.46
COPS7B-219ENST00000474042 PRR5LQ6MZQ0 368 aa17.93■□□□□ 0.46
COPS7B-219ENST00000474042 TBC1D2BQ9UPU7 963 aa17.93■□□□□ 0.46
COPS7B-219ENST00000474042 NUDCQ9Y266 331 aa17.93■□□□□ 0.46
COPS7B-219ENST00000474042 DLG5Q8TDM6 1919 aa17.93■□□□□ 0.46
COPS7B-219ENST00000474042 KDM3BQ7LBC6 1761 aa17.92■□□□□ 0.46
COPS7B-219ENST00000474042 NFKBIEO00221 500 aa17.92■□□□□ 0.46
COPS7B-219ENST00000474042 FSTL1Q12841 308 aa17.92■□□□□ 0.46
COPS7B-219ENST00000474042 PDZRN3Q9UPQ7 1066 aa17.92■□□□□ 0.46
COPS7B-219ENST00000474042 IFFO2Q5TF58 517 aa17.91■□□□□ 0.46
COPS7B-219ENST00000474042 C16orf71Q8IYS4 520 aaPredicted RBP17.91■□□□□ 0.46
COPS7B-219ENST00000474042 DNAJC5GQ8N7S2 189 aa17.91■□□□□ 0.46
COPS7B-219ENST00000474042 BRIP1Q9BX63 1249 aa17.91■□□□□ 0.46
COPS7B-219ENST00000474042 ZNF330Q9Y3S2 320 aaPredicted RBP17.91■□□□□ 0.46
COPS7B-219ENST00000474042 SLX4Q8IY92 1834 aa17.91■□□□□ 0.46
COPS7B-219ENST00000474042 U2AF1L5P0DN76 240 aaPredicted RBP17.9■□□□□ 0.46
COPS7B-219ENST00000474042 PDE6BP35913 854 aa17.9■□□□□ 0.46
COPS7B-219ENST00000474042 U2AF1Q01081 240 aaKnown RBP eCLIP17.9■□□□□ 0.46
COPS7B-219ENST00000474042 MCM10Q7L590 875 aa17.89■□□□□ 0.45
COPS7B-219ENST00000474042 DZIP3Q86Y13 1208 aaKnown RBP17.89■□□□□ 0.45
COPS7B-219ENST00000474042 RRAGCQ9HB90 399 aa17.89■□□□□ 0.45
COPS7B-219ENST00000474042 USP16Q9Y5T5 823 aa17.89■□□□□ 0.45
COPS7B-219ENST00000474042 PRAMEF22A3QJZ6 481 aa17.88■□□□□ 0.45
COPS7B-219ENST00000474042 GLTPD2A6NH11 291 aa17.88■□□□□ 0.45
COPS7B-219ENST00000474042 CNBD1Q8NA66 436 aa17.88■□□□□ 0.45
COPS7B-219ENST00000474042 HTATSF1O43719 755 aaKnown RBP17.87■□□□□ 0.45
COPS7B-219ENST00000474042 CCDC24Q8N4L8 307 aa17.87■□□□□ 0.45
COPS7B-219ENST00000474042 RTF1Q92541 710 aaKnown RBP17.87■□□□□ 0.45
COPS7B-219ENST00000474042 SETDB2Q96T68 719 aa17.87■□□□□ 0.45
COPS7B-219ENST00000474042 LTBP3Q9NS15 1303 aa17.87■□□□□ 0.45
COPS7B-219ENST00000474042 SNRPA1P09661 255 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms