RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 ADAMTS7Q9UKP4 1686 aa20.8■□□□□ 0.92
CLIC3-201ENST00000473911 PARP3Q9Y6F1 533 aa20.79■□□□□ 0.92
CLIC3-201ENST00000473911 FCHSD2O94868 740 aa20.78■□□□□ 0.92
CLIC3-201ENST00000473911 CYP19A1P11511 503 aaPredicted RBP20.78■□□□□ 0.92
CLIC3-201ENST00000473911 VSIG10Q8N0Z9 540 aa20.77■□□□□ 0.92
CLIC3-201ENST00000473911 NMRK2Q9NPI5 230 aa20.77■□□□□ 0.92
CLIC3-201ENST00000473911 KCPQ6ZWJ8 1503 aa20.77■□□□□ 0.92
CLIC3-201ENST00000473911 USP42Q9H9J4 1324 aaKnown RBP20.77■□□□□ 0.91
CLIC3-201ENST00000473911 RTF1Q92541 710 aaKnown RBP20.76■□□□□ 0.91
CLIC3-201ENST00000473911 ZPR1O75312 459 aa20.75■□□□□ 0.91
CLIC3-201ENST00000473911 CHRNA5P30532 468 aa20.75■□□□□ 0.91
CLIC3-201ENST00000473911 ZNF790Q6PG37 636 aa20.75■□□□□ 0.91
CLIC3-201ENST00000473911 VIRMAQ69YN4 1812 aaKnown RBP20.75■□□□□ 0.91
CLIC3-201ENST00000473911 ARFGEF1Q9Y6D6 1849 aa20.74■□□□□ 0.91
CLIC3-201ENST00000473911 STARD3NLO95772 234 aa20.74■□□□□ 0.91
CLIC3-201ENST00000473911 SOS1Q07889 1333 aaPredicted RBP20.74■□□□□ 0.91
CLIC3-201ENST00000473911 NEFMP07197 916 aa20.73■□□□□ 0.91
CLIC3-201ENST00000473911 TM4SF1P30408 202 aa20.73■□□□□ 0.91
CLIC3-201ENST00000473911 C9orf131Q5VYM1 1079 aa20.73■□□□□ 0.91
CLIC3-201ENST00000473911 ZNF496Q96IT1 587 aaPredicted RBP20.73■□□□□ 0.91
CLIC3-201ENST00000473911 ZBTB1Q9Y2K1 713 aa20.73■□□□□ 0.91
CLIC3-201ENST00000473911 CEMIPQ8WUJ3 1361 aa20.72■□□□□ 0.91
CLIC3-201ENST00000473911 BTBD11A6QL63 1104 aa20.72■□□□□ 0.91
CLIC3-201ENST00000473911 POLRMTO00411 1230 aaKnown RBP20.72■□□□□ 0.91
CLIC3-201ENST00000473911 USPL1Q5W0Q7 1092 aa20.72■□□□□ 0.91
CLIC3-201ENST00000473911 CANXP27824 592 aaKnown RBP20.71■□□□□ 0.91
CLIC3-201ENST00000473911 FMNL2Q96PY5 1086 aa20.71■□□□□ 0.91
CLIC3-201ENST00000473911 TEX13AQ9BXU3 409 aaPredicted RBP20.71■□□□□ 0.91
CLIC3-201ENST00000473911 COL15A1P39059 1388 aa20.71■□□□□ 0.91
CLIC3-201ENST00000473911 HEG1Q9ULI3 1381 aa20.71■□□□□ 0.91
CLIC3-201ENST00000473911 MCM10Q7L590 875 aa20.7■□□□□ 0.9
CLIC3-201ENST00000473911 PIM2Q9P1W9 311 aa20.7■□□□□ 0.9
CLIC3-201ENST00000473911 AFDNP55196 1824 aaKnown RBP20.69■□□□□ 0.9
CLIC3-201ENST00000473911 DDX10Q13206 875 aaKnown RBP20.69■□□□□ 0.9
CLIC3-201ENST00000473911 TOMM70O94826 608 aa20.68■□□□□ 0.9
CLIC3-201ENST00000473911 DALRD3Q5D0E6 543 aaKnown RBP20.68■□□□□ 0.9
CLIC3-201ENST00000473911 DNAJC5GQ8N7S2 189 aa20.68■□□□□ 0.9
CLIC3-201ENST00000473911 BCL2L12Q9HB09 334 aa20.68■□□□□ 0.9
CLIC3-201ENST00000473911 NARFQ9UHQ1 456 aa20.68■□□□□ 0.9
CLIC3-201ENST00000473911 SBF1O95248 1867 aa20.68■□□□□ 0.9
CLIC3-201ENST00000473911 KCNQ3O43525 872 aa20.67■□□□□ 0.9
CLIC3-201ENST00000473911 HTATSF1O43719 755 aaKnown RBP20.67■□□□□ 0.9
CLIC3-201ENST00000473911 DCTN1Q14203 1278 aa20.67■□□□□ 0.9
CLIC3-201ENST00000473911 RALBP1Q15311 655 aa20.67■□□□□ 0.9
CLIC3-201ENST00000473911 ZNF330Q9Y3S2 320 aaPredicted RBP20.67■□□□□ 0.9
CLIC3-201ENST00000473911 A0A087WZG4 1122 aa20.66■□□□□ 0.9
CLIC3-201ENST00000473911 HTRA3P83110 453 aa20.66■□□□□ 0.9
CLIC3-201ENST00000473911 NFIXQ14938 502 aa20.66■□□□□ 0.9
CLIC3-201ENST00000473911 UBR2Q8IWV8 1755 aa20.66■□□□□ 0.9
CLIC3-201ENST00000473911 PRELPP51888 382 aa20.65■□□□□ 0.9
CLIC3-201ENST00000473911 NPM2Q86SE8 214 aaKnown RBP20.65■□□□□ 0.9
CLIC3-201ENST00000473911 PNNQ9H307 717 aaKnown RBP20.65■□□□□ 0.9
CLIC3-201ENST00000473911 RNF181Q9P0P0 153 aa20.65■□□□□ 0.9
CLIC3-201ENST00000473911 APLP1P51693 650 aa20.64■□□□□ 0.89
CLIC3-201ENST00000473911 EIF5P55010 431 aaKnown RBP20.64■□□□□ 0.89
CLIC3-201ENST00000473911 RASSF7Q02833 373 aa20.64■□□□□ 0.89
CLIC3-201ENST00000473911 MAPK8IP3Q9UPT6 1336 aa20.63■□□□□ 0.89
CLIC3-201ENST00000473911 NRXN2Q9P2S2 1712 aa20.63■□□□□ 0.89
CLIC3-201ENST00000473911 A1BGP04217 495 aa20.62■□□□□ 0.89
CLIC3-201ENST00000473911 SIPA1L3O60292 1781 aaPredicted RBP20.62■□□□□ 0.89
CLIC3-201ENST00000473911 CARMIL3Q8ND23 1372 aa20.61■□□□□ 0.89
CLIC3-201ENST00000473911 PCNTO95613 3336 aa20.61■□□□□ 0.89
CLIC3-201ENST00000473911 IL6STP40189 918 aaPredicted RBP20.61■□□□□ 0.89
CLIC3-201ENST00000473911 TAF7Q15545 349 aaPredicted RBP20.61■□□□□ 0.89
CLIC3-201ENST00000473911 NFE2L2Q16236 605 aa20.61■□□□□ 0.89
CLIC3-201ENST00000473911 PLEKHF1Q96S99 279 aa20.61■□□□□ 0.89
CLIC3-201ENST00000473911 RRAGCQ9HB90 399 aa20.61■□□□□ 0.89
CLIC3-201ENST00000473911 SNRPA1P09661 255 aaKnown RBP20.6■□□□□ 0.89
CLIC3-201ENST00000473911 BICDL1Q6ZP65 573 aa20.6■□□□□ 0.89
CLIC3-201ENST00000473911 TBC1D2BQ9UPU7 963 aa20.6■□□□□ 0.89
CLIC3-201ENST00000473911 WDR90Q96KV7 1748 aa20.6■□□□□ 0.89
CLIC3-201ENST00000473911 SERPINB2P05120 415 aa20.59■□□□□ 0.89
CLIC3-201ENST00000473911 RBM46Q8TBY0 533 aaKnown RBP20.59■□□□□ 0.89
CLIC3-201ENST00000473911 USP16Q9Y5T5 823 aa20.59■□□□□ 0.89
CLIC3-201ENST00000473911 MYBBP1AQ9BQG0 1328 aaKnown RBP20.58■□□□□ 0.89
CLIC3-201ENST00000473911 MIS18AQ9NYP9 233 aa20.58■□□□□ 0.89
CLIC3-201ENST00000473911 DLEC1Q9Y238 1755 aa20.58■□□□□ 0.89
CLIC3-201ENST00000473911 PRAMEF22A3QJZ6 481 aa20.57■□□□□ 0.88
CLIC3-201ENST00000473911 CCDC88AQ3V6T2 1871 aa20.57■□□□□ 0.88
CLIC3-201ENST00000473911 CCDC24Q8N4L8 307 aa20.57■□□□□ 0.88
CLIC3-201ENST00000473911 PNISRQ8TF01 805 aaKnown RBP20.57■□□□□ 0.88
CLIC3-201ENST00000473911 PIP4K2AP48426 406 aaPredicted RBP20.56■□□□□ 0.88
CLIC3-201ENST00000473911 TBC1D9BQ66K14 1250 aa20.56■□□□□ 0.88
CLIC3-201ENST00000473911 ANKRD31Q8N7Z5 1873 aa20.56■□□□□ 0.88
CLIC3-201ENST00000473911 DZIP3Q86Y13 1208 aaKnown RBP20.55■□□□□ 0.88
CLIC3-201ENST00000473911 C2CD5Q86YS7 1000 aa20.55■□□□□ 0.88
CLIC3-201ENST00000473911 KDM2BQ8NHM5 1336 aa20.54■□□□□ 0.88
CLIC3-201ENST00000473911 C16orf71Q8IYS4 520 aaPredicted RBP20.54■□□□□ 0.88
CLIC3-201ENST00000473911 THUMPD2Q9BTF0 503 aaKnown RBP20.54■□□□□ 0.88
CLIC3-201ENST00000473911 NFKBIEO00221 500 aa20.53■□□□□ 0.88
CLIC3-201ENST00000473911 CAMTA2O94983 1202 aa20.53■□□□□ 0.88
CLIC3-201ENST00000473911 TNRC6CQ9HCJ0 1690 aaKnown RBP20.53■□□□□ 0.88
CLIC3-201ENST00000473911 NPHP1O15259 732 aa20.52■□□□□ 0.88
CLIC3-201ENST00000473911 WDR43Q15061 677 aaKnown RBP eCLIP20.52■□□□□ 0.88
CLIC3-201ENST00000473911 TTLL6Q8N841 843 aa20.52■□□□□ 0.88
CLIC3-201ENST00000473911 SETDB2Q96T68 719 aa20.52■□□□□ 0.88
CLIC3-201ENST00000473911 COL11A2P13942 1736 aaPredicted RBP20.51■□□□□ 0.87
CLIC3-201ENST00000473911 RIPK4P57078 832 aa20.51■□□□□ 0.87
CLIC3-201ENST00000473911 FSTL1Q12841 308 aa20.51■□□□□ 0.87
CLIC3-201ENST00000473911 H0YIN7 160 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms