RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 BCS1LQ9Y276 419 aa12.85□□□□□ -0.35
BRD3-205ENST00000473349 KIF13BQ9NQT8 1826 aa12.84□□□□□ -0.35
BRD3-205ENST00000473349 DIAPH1O60610 1272 aaKnown RBP12.84□□□□□ -0.35
BRD3-205ENST00000473349 GPBP1L1Q9HC44 474 aaPredicted RBP12.84□□□□□ -0.35
BRD3-205ENST00000473349 COL3A1P02461 1466 aaPredicted RBP12.84□□□□□ -0.35
BRD3-205ENST00000473349 ADAMTS7Q9UKP4 1686 aa12.83□□□□□ -0.35
BRD3-205ENST00000473349 CHRDL2Q6WN34 429 aa12.83□□□□□ -0.36
BRD3-205ENST00000473349 PARP3Q9Y6F1 533 aa12.83□□□□□ -0.36
BRD3-205ENST00000473349 USP42Q9H9J4 1324 aaKnown RBP12.83□□□□□ -0.36
BRD3-205ENST00000473349 KCPQ6ZWJ8 1503 aa12.83□□□□□ -0.36
BRD3-205ENST00000473349 SPDYE2BA6NHP3 402 aa12.82□□□□□ -0.36
BRD3-205ENST00000473349 U2SURPO15042 1029 aaKnown RBP12.82□□□□□ -0.36
BRD3-205ENST00000473349 SPDYE6P0CI01 402 aa12.82□□□□□ -0.36
BRD3-205ENST00000473349 KCNA3P22001 575 aa12.82□□□□□ -0.36
BRD3-205ENST00000473349 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
BRD3-205ENST00000473349 CCDC87Q9NVE4 849 aa12.82□□□□□ -0.36
BRD3-205ENST00000473349 MRC1P22897 1456 aa12.82□□□□□ -0.36
BRD3-205ENST00000473349 VIRMAQ69YN4 1812 aaKnown RBP12.81□□□□□ -0.36
BRD3-205ENST00000473349 FCHSD2O94868 740 aa12.81□□□□□ -0.36
BRD3-205ENST00000473349 CYP19A1P11511 503 aaPredicted RBP12.81□□□□□ -0.36
BRD3-205ENST00000473349 CHRNA5P30532 468 aa12.81□□□□□ -0.36
BRD3-205ENST00000473349 USPL1Q5W0Q7 1092 aa12.81□□□□□ -0.36
BRD3-205ENST00000473349 ARHGAP27Q6ZUM4 889 aa12.81□□□□□ -0.36
BRD3-205ENST00000473349 ZBTB1Q9Y2K1 713 aa12.81□□□□□ -0.36
BRD3-205ENST00000473349 SOS1Q07889 1333 aaPredicted RBP12.81□□□□□ -0.36
BRD3-205ENST00000473349 TGFB2P61812 414 aa12.8□□□□□ -0.36
BRD3-205ENST00000473349 REM2Q8IYK8 340 aaPredicted RBP12.8□□□□□ -0.36
BRD3-205ENST00000473349 POLRMTO00411 1230 aaKnown RBP12.79□□□□□ -0.36
BRD3-205ENST00000473349 CANXP27824 592 aaKnown RBP12.79□□□□□ -0.36
BRD3-205ENST00000473349 IL17REQ8NFR9 667 aa12.79□□□□□ -0.36
BRD3-205ENST00000473349 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
BRD3-205ENST00000473349 BRCA1P38398 1863 aaKnown RBP12.78□□□□□ -0.36
BRD3-205ENST00000473349 KIF3CO14782 793 aa12.78□□□□□ -0.36
BRD3-205ENST00000473349 TM4SF1P30408 202 aa12.78□□□□□ -0.36
BRD3-205ENST00000473349 PHACTR3Q96KR7 559 aa12.78□□□□□ -0.36
BRD3-205ENST00000473349 COL15A1P39059 1388 aa12.78□□□□□ -0.36
BRD3-205ENST00000473349 KCNQ3O43525 872 aa12.77□□□□□ -0.37
BRD3-205ENST00000473349 ZPR1O75312 459 aa12.77□□□□□ -0.37
BRD3-205ENST00000473349 NFIXQ14938 502 aa12.77□□□□□ -0.37
BRD3-205ENST00000473349 BICDL1Q6ZP65 573 aa12.76□□□□□ -0.37
BRD3-205ENST00000473349 ZNF496Q96IT1 587 aaPredicted RBP12.76□□□□□ -0.37
BRD3-205ENST00000473349 NMRK2Q9NPI5 230 aa12.76□□□□□ -0.37
BRD3-205ENST00000473349 CARMIL3Q8ND23 1372 aa12.76□□□□□ -0.37
BRD3-205ENST00000473349 UBR2Q8IWV8 1755 aa12.76□□□□□ -0.37
BRD3-205ENST00000473349 PRKAR2BP31323 418 aa12.75□□□□□ -0.37
BRD3-205ENST00000473349 C9orf131Q5VYM1 1079 aa12.75□□□□□ -0.37
BRD3-205ENST00000473349 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
BRD3-205ENST00000473349 PIM2Q9P1W9 311 aa12.75□□□□□ -0.37
BRD3-205ENST00000473349 NPC1L1Q9UHC9 1359 aa12.75□□□□□ -0.37
BRD3-205ENST00000473349 NARFQ9UHQ1 456 aa12.75□□□□□ -0.37
BRD3-205ENST00000473349 ZNF330Q9Y3S2 320 aaPredicted RBP12.75□□□□□ -0.37
BRD3-205ENST00000473349 GNAT3A8MTJ3 354 aa12.74□□□□□ -0.37
BRD3-205ENST00000473349 PIP4K2AP48426 406 aaPredicted RBP12.74□□□□□ -0.37
BRD3-205ENST00000473349 DALRD3Q5D0E6 543 aaKnown RBP12.74□□□□□ -0.37
BRD3-205ENST00000473349 TTC5Q8N0Z6 440 aa12.74□□□□□ -0.37
BRD3-205ENST00000473349 AFDNP55196 1824 aaKnown RBP12.74□□□□□ -0.37
BRD3-205ENST00000473349 PRAMEF22A3QJZ6 481 aa12.73□□□□□ -0.37
BRD3-205ENST00000473349 A1BGP04217 495 aa12.73□□□□□ -0.37
BRD3-205ENST00000473349 RASSF7Q02833 373 aa12.73□□□□□ -0.37
BRD3-205ENST00000473349 TEFQ10587 303 aa12.73□□□□□ -0.37
BRD3-205ENST00000473349 ZNF790Q6PG37 636 aa12.73□□□□□ -0.37
BRD3-205ENST00000473349 RSPH6AQ9H0K4 717 aa12.73□□□□□ -0.37
BRD3-205ENST00000473349 TBC1D2BQ9UPU7 963 aa12.73□□□□□ -0.37
BRD3-205ENST00000473349 SIPA1L3O60292 1781 aaPredicted RBP12.73□□□□□ -0.37
BRD3-205ENST00000473349 HEG1Q9ULI3 1381 aa12.72□□□□□ -0.37
BRD3-205ENST00000473349 ARFGEF1Q9Y6D6 1849 aa12.72□□□□□ -0.37
BRD3-205ENST00000473349 SERPINB2P05120 415 aa12.72□□□□□ -0.37
BRD3-205ENST00000473349 HSPA6P17066 643 aa12.72□□□□□ -0.37
BRD3-205ENST00000473349 PPP2R1AP30153 589 aa12.72□□□□□ -0.37
BRD3-205ENST00000473349 PRELPP51888 382 aa12.72□□□□□ -0.37
BRD3-205ENST00000473349 EIF5P55010 431 aaKnown RBP12.72□□□□□ -0.37
BRD3-205ENST00000473349 DCTN1Q14203 1278 aa12.72□□□□□ -0.37
BRD3-205ENST00000473349 TBC1D9BQ66K14 1250 aa12.72□□□□□ -0.37
BRD3-205ENST00000473349 VSIG10Q8N0Z9 540 aa12.72□□□□□ -0.37
BRD3-205ENST00000473349 GAS2L2Q8NHY3 880 aa12.72□□□□□ -0.37
BRD3-205ENST00000473349 RNF181Q9P0P0 153 aa12.72□□□□□ -0.37
BRD3-205ENST00000473349 MCM10Q7L590 875 aa12.71□□□□□ -0.37
BRD3-205ENST00000473349 NRXN2Q9P2S2 1712 aa12.71□□□□□ -0.38
BRD3-205ENST00000473349 CEMIPQ8WUJ3 1361 aa12.7□□□□□ -0.38
BRD3-205ENST00000473349 STARD3NLO95772 234 aa12.7□□□□□ -0.38
BRD3-205ENST00000473349 U2AF1L5P0DN76 240 aaPredicted RBP12.7□□□□□ -0.38
BRD3-205ENST00000473349 U2AF1Q01081 240 aaKnown RBP eCLIP12.7□□□□□ -0.38
BRD3-205ENST00000473349 C2CD5Q86YS7 1000 aa12.7□□□□□ -0.38
BRD3-205ENST00000473349 BTBD11A6QL63 1104 aa12.69□□□□□ -0.38
BRD3-205ENST00000473349 HTRA3P83110 453 aa12.69□□□□□ -0.38
BRD3-205ENST00000473349 CFAP53Q96M91 514 aa12.69□□□□□ -0.38
BRD3-205ENST00000473349 USP16Q9Y5T5 823 aa12.69□□□□□ -0.38
BRD3-205ENST00000473349 FMNL2Q96PY5 1086 aa12.68□□□□□ -0.38
BRD3-205ENST00000473349 MIS18AQ9NYP9 233 aa12.68□□□□□ -0.38
BRD3-205ENST00000473349 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
BRD3-205ENST00000473349 ANKRD31Q8N7Z5 1873 aa12.68□□□□□ -0.38
BRD3-205ENST00000473349 SCN7AQ01118 1682 aa12.67□□□□□ -0.38
BRD3-205ENST00000473349 PITPNM1O00562 1244 aa12.67□□□□□ -0.38
BRD3-205ENST00000473349 RRAGCQ9HB90 399 aa12.67□□□□□ -0.38
BRD3-205ENST00000473349 SBF1O95248 1867 aa12.66□□□□□ -0.38
BRD3-205ENST00000473349 COL11A2P13942 1736 aaPredicted RBP12.66□□□□□ -0.38
BRD3-205ENST00000473349 NFKBIEO00221 500 aa12.66□□□□□ -0.38
BRD3-205ENST00000473349 TOMM70O94826 608 aa12.66□□□□□ -0.38
BRD3-205ENST00000473349 CAMTA2O94983 1202 aa12.66□□□□□ -0.38
BRD3-205ENST00000473349 PRR5LQ6MZQ0 368 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms