RNA–Protein interactions for RNA: ENST00000473330.1

FSCN1-205, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 2

Gene FSCN1, Length 2,215 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-205ENST00000473330 RAB11FIP3O75154 756 aa24.76■■□□□ 1.55
FSCN1-205ENST00000473330 PLEKHG5O94827 1062 aa24.76■■□□□ 1.55
FSCN1-205ENST00000473330 NLRP6P59044 892 aa24.76■■□□□ 1.55
FSCN1-205ENST00000473330 XPCQ01831 940 aaPredicted RBP24.76■■□□□ 1.55
FSCN1-205ENST00000473330 FOXD4L6Q3SYB3 417 aaPredicted RBP24.76■■□□□ 1.55
FSCN1-205ENST00000473330 FOXD4L3Q6VB84 417 aaPredicted RBP24.76■■□□□ 1.55
FSCN1-205ENST00000473330 PPP1R42Q7Z4L9 355 aa24.76■■□□□ 1.55
FSCN1-205ENST00000473330 PI4K2BQ8TCG2 481 aa24.76■■□□□ 1.55
FSCN1-205ENST00000473330 TSPY26PQ9H489 355 aa24.76■■□□□ 1.55
FSCN1-205ENST00000473330 GDPD2Q9HCC8 539 aa24.76■■□□□ 1.55
FSCN1-205ENST00000473330 MAP4K4O95819 1239 aaPredicted RBP24.75■■□□□ 1.55
FSCN1-205ENST00000473330 POLA2Q14181 598 aa24.75■■□□□ 1.55
FSCN1-205ENST00000473330 CCDC39Q9UFE4 941 aa24.75■■□□□ 1.55
FSCN1-205ENST00000473330 SURF6O75683 361 aaKnown RBP24.74■■□□□ 1.55
FSCN1-205ENST00000473330 DIP2AQ14689 1571 aa24.74■■□□□ 1.55
FSCN1-205ENST00000473330 SYAP1Q96A49 352 aaPredicted RBP24.74■■□□□ 1.55
FSCN1-205ENST00000473330 WDR33Q9C0J8 1336 aaKnown RBP24.74■■□□□ 1.55
FSCN1-205ENST00000473330 MCM5P33992 734 aa24.74■■□□□ 1.55
FSCN1-205ENST00000473330 HDGFL1Q5TGJ6 251 aa24.74■■□□□ 1.55
FSCN1-205ENST00000473330 USP48Q86UV5 1035 aa24.74■■□□□ 1.55
FSCN1-205ENST00000473330 RHPN1Q8TCX5 695 aa24.73■■□□□ 1.55
FSCN1-205ENST00000473330 R3HCC1Q9Y3T6 440 aaKnown RBP24.73■■□□□ 1.55
FSCN1-205ENST00000473330 SGSM2O43147 1006 aa24.73■■□□□ 1.55
FSCN1-205ENST00000473330 RPAP1Q9BWH6 1393 aaPredicted RBP24.72■■□□□ 1.55
FSCN1-205ENST00000473330 RAD50Q92878 1312 aa24.72■■□□□ 1.55
FSCN1-205ENST00000473330 NUTM2GQ5VZR2 741 aa24.71■■□□□ 1.55
FSCN1-205ENST00000473330 SNX14Q9Y5W7 946 aa24.71■■□□□ 1.55
FSCN1-205ENST00000473330 MARF1Q9Y4F3 1742 aaKnown RBP24.71■■□□□ 1.55
FSCN1-205ENST00000473330 LTV1Q96GA3 475 aaPredicted RBP24.7■■□□□ 1.54
FSCN1-205ENST00000473330 TTC14Q96N46 770 aa24.7■■□□□ 1.54
FSCN1-205ENST00000473330 LSG1Q9H089 658 aaKnown RBP24.7■■□□□ 1.54
FSCN1-205ENST00000473330 EID1Q9Y6B2 187 aa24.69■■□□□ 1.54
FSCN1-205ENST00000473330 SRGAP3O43295 1099 aa24.69■■□□□ 1.54
FSCN1-205ENST00000473330 NBPF7P0C2Y1 421 aaPredicted RBP24.69■■□□□ 1.54
FSCN1-205ENST00000473330 TMEM87AQ8NBN3 555 aa24.69■■□□□ 1.54
FSCN1-205ENST00000473330 KIF1BPQ96EK5 621 aa24.69■■□□□ 1.54
FSCN1-205ENST00000473330 TCHHQ07283 1943 aa24.69■■□□□ 1.54
FSCN1-205ENST00000473330 TBX22Q9Y458 520 aa24.68■■□□□ 1.54
FSCN1-205ENST00000473330 PHF14O94880 888 aa24.67■■□□□ 1.54
FSCN1-205ENST00000473330 RASEFQ8IZ41 740 aa24.67■■□□□ 1.54
FSCN1-205ENST00000473330 PDCL3Q9H2J4 239 aa24.67■■□□□ 1.54
FSCN1-205ENST00000473330 AK2P54819 239 aa24.67■■□□□ 1.54
FSCN1-205ENST00000473330 CSPP1Q1MSJ5 1256 aa24.66■■□□□ 1.54
FSCN1-205ENST00000473330 CNTROBQ8N137 903 aa24.66■■□□□ 1.54
FSCN1-205ENST00000473330 USHBP1Q8N6Y0 703 aa24.66■■□□□ 1.54
FSCN1-205ENST00000473330 EIF2S2P20042 333 aaKnown RBP24.66■■□□□ 1.54
FSCN1-205ENST00000473330 RUFY3Q7L099 469 aa24.65■■□□□ 1.54
FSCN1-205ENST00000473330 CNPY2Q9Y2B0 182 aa24.65■■□□□ 1.54
FSCN1-205ENST00000473330 CEBPAP49715 358 aaPredicted RBP24.65■■□□□ 1.54
FSCN1-205ENST00000473330 BEND3Q5T5X7 828 aa24.65■■□□□ 1.54
FSCN1-205ENST00000473330 CEMIPQ8WUJ3 1361 aa24.64■■□□□ 1.54
FSCN1-205ENST00000473330 ZSCAN22P10073 491 aaPredicted RBP24.64■■□□□ 1.54
FSCN1-205ENST00000473330 LARP6Q9BRS8 491 aaKnown RBP24.64■■□□□ 1.54
FSCN1-205ENST00000473330 EIF4A1P60842 406 aaKnown RBP24.63■■□□□ 1.53
FSCN1-205ENST00000473330 LIMCH1Q9UPQ0 1083 aa24.63■■□□□ 1.53
FSCN1-205ENST00000473330 CRYBG1Q9Y4K1 1723 aa24.63■■□□□ 1.53
FSCN1-205ENST00000473330 CWC27Q6UX04 472 aaKnown RBP24.63■■□□□ 1.53
FSCN1-205ENST00000473330 CHPF2Q9P2E5 772 aa24.63■■□□□ 1.53
FSCN1-205ENST00000473330 ABTB2Q8N961 1025 aa24.62■■□□□ 1.53
FSCN1-205ENST00000473330 DNAAF4Q8WXU2 420 aa24.62■■□□□ 1.53
FSCN1-205ENST00000473330 SPG7Q9UQ90 795 aa24.62■■□□□ 1.53
FSCN1-205ENST00000473330 USP42Q9H9J4 1324 aaKnown RBP24.62■■□□□ 1.53
FSCN1-205ENST00000473330 USP54Q70EL1 1684 aa24.62■■□□□ 1.53
FSCN1-205ENST00000473330 PI4KAP2A4QPH2 592 aa24.62■■□□□ 1.53
FSCN1-205ENST00000473330 SYT1P21579 422 aa24.62■■□□□ 1.53
FSCN1-205ENST00000473330 CCDC183Q5T5S1 534 aa24.62■■□□□ 1.53
FSCN1-205ENST00000473330 PI4KAP1Q8N8J0 262 aa24.62■■□□□ 1.53
FSCN1-205ENST00000473330 SLIT1O75093 1534 aa24.62■■□□□ 1.53
FSCN1-205ENST00000473330 ARHGAP23Q9P227 1491 aa24.61■■□□□ 1.53
FSCN1-205ENST00000473330 STX6O43752 255 aa24.61■■□□□ 1.53
FSCN1-205ENST00000473330 PTMAP06454 111 aaKnown RBP24.61■■□□□ 1.53
FSCN1-205ENST00000473330 RBM10P98175 930 aaKnown RBP24.61■■□□□ 1.53
FSCN1-205ENST00000473330 ANKARQ7Z5J8 1434 aa24.61■■□□□ 1.53
FSCN1-205ENST00000473330 KIF13AQ9H1H9 1805 aa24.61■■□□□ 1.53
FSCN1-205ENST00000473330 UVSSAQ2YD98 709 aa24.61■■□□□ 1.53
FSCN1-205ENST00000473330 FAM184AQ8NB25 1140 aa24.61■■□□□ 1.53
FSCN1-205ENST00000473330 LGR6Q9HBX8 967 aa24.61■■□□□ 1.53
FSCN1-205ENST00000473330 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.61■■□□□ 1.53
FSCN1-205ENST00000473330 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.61■■□□□ 1.534e-23■■■□□ 16.7
FSCN1-205ENST00000473330 UQCRHLA0A096LP55 91 aa24.6■■□□□ 1.53
FSCN1-205ENST00000473330 UQCRHP07919 91 aa24.6■■□□□ 1.53
FSCN1-205ENST00000473330 VSIG10Q8N0Z9 540 aa24.6■■□□□ 1.53
FSCN1-205ENST00000473330 MED1Q15648 1581 aaPredicted RBP24.6■■□□□ 1.53
FSCN1-205ENST00000473330 CPA1P15085 419 aa24.59■■□□□ 1.53
FSCN1-205ENST00000473330 HSP90AB4PQ58FF6 505 aa24.59■■□□□ 1.53
FSCN1-205ENST00000473330 TTC41PQ6P2S7 1318 aa24.59■■□□□ 1.53
FSCN1-205ENST00000473330 F13A1P00488 732 aa24.59■■□□□ 1.53
FSCN1-205ENST00000473330 LARGE1O95461 756 aa24.58■■□□□ 1.53
FSCN1-205ENST00000473330 HOXB7P09629 217 aa24.58■■□□□ 1.53
FSCN1-205ENST00000473330 UBE2HP62256 183 aa24.58■■□□□ 1.53
FSCN1-205ENST00000473330 SMC3Q9UQE7 1217 aa24.58■■□□□ 1.53
FSCN1-205ENST00000473330 KCNQ3O43525 872 aa24.58■■□□□ 1.52
FSCN1-205ENST00000473330 GLRX3O76003 335 aaKnown RBP24.58■■□□□ 1.52
FSCN1-205ENST00000473330 CASTP20810 708 aaKnown RBP24.58■■□□□ 1.52
FSCN1-205ENST00000473330 HYPKQ9NX55 129 aa24.58■■□□□ 1.52
FSCN1-205ENST00000473330 KDM3BQ7LBC6 1761 aa24.57■■□□□ 1.52
FSCN1-205ENST00000473330 ANXA1P04083 346 aa24.57■■□□□ 1.52
FSCN1-205ENST00000473330 ADCY9O60503 1353 aa24.56■■□□□ 1.52
FSCN1-205ENST00000473330 LETM1O95202 739 aaPredicted RBP24.56■■□□□ 1.52
FSCN1-205ENST00000473330 PTH1RQ03431 593 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms