RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 DPY19L2Q6NUT2 758 aa8.72□□□□□ -1.01
HDAC1-205ENST00000472928 PDCD7Q8N8D1 485 aaKnown RBP8.72□□□□□ -1.01
HDAC1-205ENST00000472928 JMYQ8N9B5 988 aa8.72□□□□□ -1.01
HDAC1-205ENST00000472928 TMC1Q8TDI8 760 aa8.72□□□□□ -1.01
HDAC1-205ENST00000472928 NBPF4Q96M43 638 aa8.72□□□□□ -1.01
HDAC1-205ENST00000472928 NMRK2Q9NPI5 230 aa8.72□□□□□ -1.01
HDAC1-205ENST00000472928 UBR3Q6ZT12 1888 aa8.72□□□□□ -1.01
HDAC1-205ENST00000472928 PXDNLA1KZ92 1463 aa8.71□□□□□ -1.01
HDAC1-205ENST00000472928 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.71□□□□□ -1.02
HDAC1-205ENST00000472928 PHF14O94880 888 aa8.71□□□□□ -1.02
HDAC1-205ENST00000472928 ATN1P54259 1190 aaPredicted RBP8.71□□□□□ -1.02
HDAC1-205ENST00000472928 PPP1R15BQ5SWA1 713 aa8.71□□□□□ -1.02
HDAC1-205ENST00000472928 HDGFL2Q7Z4V5 671 aaPredicted RBP8.71□□□□□ -1.02
HDAC1-205ENST00000472928 MICALL2Q8IY33 904 aa8.71□□□□□ -1.02
HDAC1-205ENST00000472928 USHBP1Q8N6Y0 703 aa8.71□□□□□ -1.02
HDAC1-205ENST00000472928 KLRG1Q96E93 195 aa8.71□□□□□ -1.02
HDAC1-205ENST00000472928 WDR90Q96KV7 1748 aa8.71□□□□□ -1.02
HDAC1-205ENST00000472928 KIAA1551Q9HCM1 1747 aa8.71□□□□□ -1.02
HDAC1-205ENST00000472928 PRELPP51888 382 aa8.7□□□□□ -1.02
HDAC1-205ENST00000472928 RBM46Q8TBY0 533 aaKnown RBP8.7□□□□□ -1.02
HDAC1-205ENST00000472928 ZC3H15Q8WU90 426 aaKnown RBP8.7□□□□□ -1.02
HDAC1-205ENST00000472928 AK7Q96M32 723 aa8.7□□□□□ -1.02
HDAC1-205ENST00000472928 CGNL1Q0VF96 1302 aa8.7□□□□□ -1.02
HDAC1-205ENST00000472928 KIF20BQ96Q89 1820 aa8.7□□□□□ -1.02
HDAC1-205ENST00000472928 MAP2P11137 1827 aaKnown RBP8.69□□□□□ -1.02
HDAC1-205ENST00000472928 CYP27B1O15528 508 aa8.69□□□□□ -1.02
HDAC1-205ENST00000472928 SSFA2P28290 1259 aa8.69□□□□□ -1.02
HDAC1-205ENST00000472928 AMPHP49418 695 aa8.69□□□□□ -1.02
HDAC1-205ENST00000472928 MPRIPQ6WCQ1 1025 aa8.69□□□□□ -1.02
HDAC1-205ENST00000472928 LINC00116Q8NCU8 138 aa8.69□□□□□ -1.02
HDAC1-205ENST00000472928 TERF2IPQ9NYB0 399 aa8.69□□□□□ -1.02
HDAC1-205ENST00000472928 RTL1A6NKG5 1358 aa8.69□□□□□ -1.02
HDAC1-205ENST00000472928 C10orf71Q711Q0 1435 aa8.69□□□□□ -1.02
HDAC1-205ENST00000472928 ANKRD26Q9UPS8 1709 aa8.68□□□□□ -1.02
HDAC1-205ENST00000472928 KIF13BQ9NQT8 1826 aa8.68□□□□□ -1.02
HDAC1-205ENST00000472928 ATMINO43313 823 aaPredicted RBP8.68□□□□□ -1.02
HDAC1-205ENST00000472928 MMP10P09238 476 aa8.68□□□□□ -1.02
HDAC1-205ENST00000472928 HMGB2P26583 209 aaKnown RBP8.68□□□□□ -1.02
HDAC1-205ENST00000472928 IRX5P78411 483 aaPredicted RBP8.68□□□□□ -1.02
HDAC1-205ENST00000472928 ASTLQ6HA08 431 aaPredicted RBP8.68□□□□□ -1.02
HDAC1-205ENST00000472928 TNS4Q8IZW8 715 aa8.68□□□□□ -1.02
HDAC1-205ENST00000472928 RAPGEF4Q8WZA2 1011 aa8.68□□□□□ -1.02
HDAC1-205ENST00000472928 PIGBQ92521 554 aa8.68□□□□□ -1.02
HDAC1-205ENST00000472928 SMARCC1Q92922 1105 aaPredicted RBP8.68□□□□□ -1.02
HDAC1-205ENST00000472928 PCDH11XQ9BZA7 1347 aa8.68□□□□□ -1.02
HDAC1-205ENST00000472928 PCDH11YQ9BZA8 1340 aa8.68□□□□□ -1.02
HDAC1-205ENST00000472928 NSD3Q9BZ95 1437 aa8.68□□□□□ -1.02
HDAC1-205ENST00000472928 A0A0G2JLW4 131 aa8.67□□□□□ -1.02
HDAC1-205ENST00000472928 TATP17735 454 aaPredicted RBP8.67□□□□□ -1.02
HDAC1-205ENST00000472928 ITPK1Q13572 414 aa8.67□□□□□ -1.02
HDAC1-205ENST00000472928 RRS1Q15050 365 aaKnown RBP8.67□□□□□ -1.02
HDAC1-205ENST00000472928 CDCA8Q53HL2 280 aa8.67□□□□□ -1.02
HDAC1-205ENST00000472928 IER5LQ5T953 404 aa8.67□□□□□ -1.02
HDAC1-205ENST00000472928 SMYD5Q6GMV2 418 aa8.67□□□□□ -1.02
HDAC1-205ENST00000472928 COG3Q96JB2 828 aa8.67□□□□□ -1.02
HDAC1-205ENST00000472928 BCS1LQ9Y276 419 aa8.67□□□□□ -1.02
HDAC1-205ENST00000472928 ITGB4P16144 1822 aa8.66□□□□□ -1.02
HDAC1-205ENST00000472928 N4BP2Q86UW6 1770 aaPredicted RBP8.66□□□□□ -1.02
HDAC1-205ENST00000472928 LOC102724428A0A0B4J2F2 783 aa8.66□□□□□ -1.02
HDAC1-205ENST00000472928 GNPATO15228 680 aa8.66□□□□□ -1.02
HDAC1-205ENST00000472928 SIK1P57059 783 aa8.66□□□□□ -1.02
HDAC1-205ENST00000472928 TGFB2P61812 414 aa8.66□□□□□ -1.02
HDAC1-205ENST00000472928 FSTL1Q12841 308 aa8.66□□□□□ -1.02
HDAC1-205ENST00000472928 DSG2Q14126 1118 aa8.66□□□□□ -1.02
HDAC1-205ENST00000472928 C9orf131Q5VYM1 1079 aa8.66□□□□□ -1.02
HDAC1-205ENST00000472928 ARHGAP27Q6ZUM4 889 aa8.66□□□□□ -1.02
HDAC1-205ENST00000472928 PUS7Q96PZ0 661 aaKnown RBP8.66□□□□□ -1.02
HDAC1-205ENST00000472928 ANP32CO43423 234 aa8.65□□□□□ -1.02
HDAC1-205ENST00000472928 DPEP1P16444 411 aa8.65□□□□□ -1.02
HDAC1-205ENST00000472928 KCNA3P22001 575 aa8.65□□□□□ -1.02
HDAC1-205ENST00000472928 HSP90AB2PQ58FF8 381 aa8.65□□□□□ -1.02
HDAC1-205ENST00000472928 TMEM121BQ9BXQ6 578 aaPredicted RBP8.65□□□□□ -1.02
HDAC1-205ENST00000472928 OCEL1Q9H607 264 aa8.65□□□□□ -1.02
HDAC1-205ENST00000472928 EMILIN3Q9NT22 766 aa8.65□□□□□ -1.02
HDAC1-205ENST00000472928 BRCA1P38398 1863 aaKnown RBP8.65□□□□□ -1.02
HDAC1-205ENST00000472928 KCPQ6ZWJ8 1503 aa8.64□□□□□ -1.03
HDAC1-205ENST00000472928 PLEKHG2Q9H7P9 1386 aa8.64□□□□□ -1.03
HDAC1-205ENST00000472928 PKD1L3Q7Z443 1732 aa8.64□□□□□ -1.03
HDAC1-205ENST00000472928 FCHSD2O94868 740 aa8.64□□□□□ -1.03
HDAC1-205ENST00000472928 FOXK1P85037 733 aa8.64□□□□□ -1.03
HDAC1-205ENST00000472928 TMC2Q8TDI7 906 aa8.64□□□□□ -1.03
HDAC1-205ENST00000472928 NCAPD2Q15021 1401 aa8.63□□□□□ -1.03
HDAC1-205ENST00000472928 SMG6Q86US8 1419 aaKnown RBP8.63□□□□□ -1.03
HDAC1-205ENST00000472928 INSRP06213 1382 aa8.63□□□□□ -1.03
HDAC1-205ENST00000472928 C16orf71Q8IYS4 520 aaPredicted RBP8.63□□□□□ -1.03
HDAC1-205ENST00000472928 ASAP1Q9ULH1 1129 aa8.63□□□□□ -1.03
HDAC1-205ENST00000472928 BOLA1Q9Y3E2 137 aa8.63□□□□□ -1.03
HDAC1-205ENST00000472928 KDRP35968 1356 aa8.62□□□□□ -1.03
HDAC1-205ENST00000472928 ARFGEF1Q9Y6D6 1849 aa8.62□□□□□ -1.03
HDAC1-205ENST00000472928 DPYSL4O14531 572 aa8.62□□□□□ -1.03
HDAC1-205ENST00000472928 FYB1O15117 783 aa8.62□□□□□ -1.03
HDAC1-205ENST00000472928 HSPA1AP0DMV8 641 aaKnown RBP8.62□□□□□ -1.03
HDAC1-205ENST00000472928 HSPA1BP0DMV9 641 aaKnown RBP8.62□□□□□ -1.03
HDAC1-205ENST00000472928 ATP6V1AP38606 617 aa8.62□□□□□ -1.03
HDAC1-205ENST00000472928 MLLT3P42568 568 aaPredicted RBP8.62□□□□□ -1.03
HDAC1-205ENST00000472928 DCAF5Q96JK2 942 aa8.62□□□□□ -1.03
HDAC1-205ENST00000472928 SLC4A9Q96Q91 983 aa8.62□□□□□ -1.03
HDAC1-205ENST00000472928 GGNBP2Q9H3C7 697 aa8.62□□□□□ -1.03
HDAC1-205ENST00000472928 RRAGCQ9HB90 399 aa8.62□□□□□ -1.03
HDAC1-205ENST00000472928 ATG3Q9NT62 314 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms