RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 RBCK1Q9BYM8 510 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 PRKD2Q9BZL6 878 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 CECR2Q9BXF3 1484 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 ATP1A2P50993 1020 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 DNM1Q05193 864 aaKnown RBP3.87□□□□□ -1.79
XRN1-210ENST00000472697 PSMD2Q13200 908 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 GRIPAP1Q4V328 841 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 OSBPL7Q9BZF2 842 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 CCSER2Q9H7U1 834 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 MRS2Q9HD23 443 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 GABBR1Q9UBS5 961 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 POLIQ9UNA4 740 aa3.87□□□□□ -1.79
XRN1-210ENST00000472697 PEX14O75381 377 aa3.86□□□□□ -1.79
XRN1-210ENST00000472697 MAP4K4O95819 1239 aaPredicted RBP3.86□□□□□ -1.79
XRN1-210ENST00000472697 PTK2Q05397 1052 aa3.86□□□□□ -1.79
XRN1-210ENST00000472697 LAPTM4AQ15012 233 aa3.86□□□□□ -1.79
XRN1-210ENST00000472697 RNF34Q969K3 372 aa3.86□□□□□ -1.79
XRN1-210ENST00000472697 SLC4A5Q9BY07 1137 aa3.86□□□□□ -1.79
XRN1-210ENST00000472697 ETNK1Q9HBU6 452 aa3.86□□□□□ -1.79
XRN1-210ENST00000472697 KLK14Q9P0G3 267 aa3.86□□□□□ -1.79
XRN1-210ENST00000472697 G3BP2Q9UN86 482 aaKnown RBP3.86□□□□□ -1.79
XRN1-210ENST00000472697 BHMG1C9JSJ3 638 aaPredicted RBP3.86□□□□□ -1.79
XRN1-210ENST00000472697 AGERQ15109 404 aa3.86□□□□□ -1.79
XRN1-210ENST00000472697 ZNF592Q92610 1267 aa3.86□□□□□ -1.79
XRN1-210ENST00000472697 ZNF516Q92618 1163 aa3.86□□□□□ -1.79
XRN1-210ENST00000472697 NGLY1Q96IV0 654 aa3.86□□□□□ -1.79
XRN1-210ENST00000472697 WBP1LQ9NX94 342 aa3.86□□□□□ -1.79
XRN1-210ENST00000472697 DDX41Q9UJV9 622 aaKnown RBP3.86□□□□□ -1.79
XRN1-210ENST00000472697 INPP5FQ9Y2H2 1132 aa3.86□□□□□ -1.79
XRN1-210ENST00000472697 SUGT1Q9Y2Z0 365 aa3.86□□□□□ -1.79
XRN1-210ENST00000472697 FAM221BA6H8Z2 402 aa3.85□□□□□ -1.79
XRN1-210ENST00000472697 PRPF40AO75400 957 aaKnown RBP3.85□□□□□ -1.79
XRN1-210ENST00000472697 DXOO77932 396 aaKnown RBP3.85□□□□□ -1.79
XRN1-210ENST00000472697 FGRP09769 529 aa3.85□□□□□ -1.79
XRN1-210ENST00000472697 EVA1CP58658 441 aa3.85□□□□□ -1.79
XRN1-210ENST00000472697 MAP7D1Q3KQU3 841 aa3.85□□□□□ -1.79
XRN1-210ENST00000472697 EPS8L3Q8TE67 593 aaKnown RBP3.85□□□□□ -1.79
XRN1-210ENST00000472697 NEUROD4Q9HD90 331 aa3.85□□□□□ -1.79
XRN1-210ENST00000472697 CYLDQ9NQC7 956 aa3.85□□□□□ -1.79
XRN1-210ENST00000472697 V9GY48 417 aaPredicted RBP3.85□□□□□ -1.79
XRN1-210ENST00000472697 SF3B2Q13435 895 aaKnown RBP3.85□□□□□ -1.79
XRN1-210ENST00000472697 FAM129BQ96TA1 746 aa3.85□□□□□ -1.79
XRN1-210ENST00000472697 TGIF2Q9GZN2 237 aa3.85□□□□□ -1.79
XRN1-210ENST00000472697 GGNBP2Q9H3C7 697 aa3.85□□□□□ -1.79
XRN1-210ENST00000472697 OSBPL3Q9H4L5 887 aa3.85□□□□□ -1.79
XRN1-210ENST00000472697 PPME1Q9Y570 386 aa3.85□□□□□ -1.79
XRN1-210ENST00000472697 ATAD2Q6PL18 1390 aa3.85□□□□□ -1.79
XRN1-210ENST00000472697 ERVH48-1M5A8F1 160 aa3.84□□□□□ -1.79
XRN1-210ENST00000472697 LZTS3O60299 673 aaPredicted RBP3.84□□□□□ -1.79
XRN1-210ENST00000472697 NPR3P17342 541 aa3.84□□□□□ -1.79
XRN1-210ENST00000472697 TRIM50Q86XT4 487 aa3.84□□□□□ -1.79
XRN1-210ENST00000472697 SPSB2Q99619 263 aa3.84□□□□□ -1.79
XRN1-210ENST00000472697 PCDHB3Q9Y5E6 796 aa3.84□□□□□ -1.79
XRN1-210ENST00000472697 FBXO24O75426 580 aa3.84□□□□□ -1.8
XRN1-210ENST00000472697 ETFBP38117 255 aa3.84□□□□□ -1.8
XRN1-210ENST00000472697 C16orf46Q6P387 395 aa3.84□□□□□ -1.8
XRN1-210ENST00000472697 USP48Q86UV5 1035 aa3.84□□□□□ -1.8
XRN1-210ENST00000472697 ZNF408Q9H9D4 720 aa3.84□□□□□ -1.8
XRN1-210ENST00000472697 PPEF1O14829 653 aaPredicted RBP3.83□□□□□ -1.8
XRN1-210ENST00000472697 PAK2Q13177 524 aa3.83□□□□□ -1.8
XRN1-210ENST00000472697 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.83□□□□□ -1.8
XRN1-210ENST00000472697 ZNF746Q6NUN9 644 aaPredicted RBP3.83□□□□□ -1.8
XRN1-210ENST00000472697 TMA7Q9Y2S6 64 aaKnown RBP3.83□□□□□ -1.8
XRN1-210ENST00000472697 NDUFB5O43674 189 aa3.83□□□□□ -1.8
XRN1-210ENST00000472697 PLCB3Q01970 1234 aa3.83□□□□□ -1.8
XRN1-210ENST00000472697 ENOX2Q16206 610 aaKnown RBP3.83□□□□□ -1.8
XRN1-210ENST00000472697 GMLQ99445 158 aa3.83□□□□□ -1.8
XRN1-210ENST00000472697 GGT7Q9UJ14 662 aa3.83□□□□□ -1.8
XRN1-210ENST00000472697 FOXD3Q9UJU5 478 aaPredicted RBP3.83□□□□□ -1.8
XRN1-210ENST00000472697 HDGFP51858 240 aaKnown RBP3.82□□□□□ -1.8
XRN1-210ENST00000472697 GDF10P55107 478 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 RBL2Q08999 1139 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 PTPROQ16827 1216 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 Q3C1V9 767 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 INTS6LQ5JSJ4 861 aaKnown RBP3.82□□□□□ -1.8
XRN1-210ENST00000472697 KANK3Q6NY19 840 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 IFT57Q9NWB7 429 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 STIM2Q9P246 746 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 HPS5Q9UPZ3 1129 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 BCS1LQ9Y276 419 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 ATF4P18848 351 aaPredicted RBP3.82□□□□□ -1.8
XRN1-210ENST00000472697 ADD1P35611 737 aaKnown RBP3.82□□□□□ -1.8
XRN1-210ENST00000472697 PLA2G2CQ5R387 149 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 ZNF511Q8NB15 262 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 GPR152Q8TDT2 470 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 EDEM1Q92611 657 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 EVI5LQ96CN4 794 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 C2orf49Q9BVC5 232 aaPredicted RBP3.82□□□□□ -1.8
XRN1-210ENST00000472697 OSBPL2Q9H1P3 480 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.82□□□□□ -1.8
XRN1-210ENST00000472697 HCN4Q9Y3Q4 1203 aa3.82□□□□□ -1.8
XRN1-210ENST00000472697 KAT6BQ8WYB5 2073 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 EIF1AYO14602 144 aaKnown RBP3.81□□□□□ -1.8
XRN1-210ENST00000472697 PPP1R12BO60237 982 aaPredicted RBP3.81□□□□□ -1.8
XRN1-210ENST00000472697 FAM13AO94988 1023 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 POLR3DP05423 398 aaPredicted RBP3.81□□□□□ -1.8
XRN1-210ENST00000472697 MMP16P51512 607 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 SH3BP2P78314 561 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 C8orf34Q49A92 452 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 KMT5BQ4FZB7 885 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms