RNA–Protein interactions for RNA: ENST00000472443.1

PEF1-204, Transcript of penta-EF-hand domain containing 1, humanhuman

TSL 3

Gene PEF1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-204ENST00000472443 USPL1Q5W0Q7 1092 aa20.7■□□□□ 0.9
PEF1-204ENST00000472443 ZNF790Q6PG37 636 aa20.7■□□□□ 0.9
PEF1-204ENST00000472443 STARD3NLO95772 234 aa20.69■□□□□ 0.9
PEF1-204ENST00000472443 DPEP1P16444 411 aa20.69■□□□□ 0.9
PEF1-204ENST00000472443 ZNF496Q96IT1 587 aaPredicted RBP20.69■□□□□ 0.9
PEF1-204ENST00000472443 N4BP2Q86UW6 1770 aaPredicted RBP20.68■□□□□ 0.9
PEF1-204ENST00000472443 POLRMTO00411 1230 aaKnown RBP20.68■□□□□ 0.9
PEF1-204ENST00000472443 TM4SF1P30408 202 aa20.68■□□□□ 0.9
PEF1-204ENST00000472443 NARFQ9UHQ1 456 aa20.68■□□□□ 0.9
PEF1-204ENST00000472443 BCS1LQ9Y276 419 aa20.68■□□□□ 0.9
PEF1-204ENST00000472443 FCHSD2O94868 740 aa20.67■□□□□ 0.9
PEF1-204ENST00000472443 HEG1Q9ULI3 1381 aa20.67■□□□□ 0.9
PEF1-204ENST00000472443 SIPA1L3O60292 1781 aaPredicted RBP20.67■□□□□ 0.9
PEF1-204ENST00000472443 CANXP27824 592 aaKnown RBP20.66■□□□□ 0.9
PEF1-204ENST00000472443 KCNA3P22001 575 aa20.65■□□□□ 0.9
PEF1-204ENST00000472443 TEX13AQ9BXU3 409 aaPredicted RBP20.65■□□□□ 0.9
PEF1-204ENST00000472443 NFIXQ14938 502 aa20.64■□□□□ 0.89
PEF1-204ENST00000472443 FMNL2Q96PY5 1086 aa20.64■□□□□ 0.89
PEF1-204ENST00000472443 BTBD11A6QL63 1104 aa20.63■□□□□ 0.89
PEF1-204ENST00000472443 EIF5P55010 431 aaKnown RBP20.63■□□□□ 0.89
PEF1-204ENST00000472443 RTF1Q92541 710 aaKnown RBP20.63■□□□□ 0.89
PEF1-204ENST00000472443 BCL2L12Q9HB09 334 aa20.63■□□□□ 0.89
PEF1-204ENST00000472443 GPBP1L1Q9HC44 474 aaPredicted RBP20.63■□□□□ 0.89
PEF1-204ENST00000472443 BRCA1P38398 1863 aaKnown RBP20.62■□□□□ 0.89
PEF1-204ENST00000472443 A0A087WZG4 1122 aa20.62■□□□□ 0.89
PEF1-204ENST00000472443 PIM2Q9P1W9 311 aa20.62■□□□□ 0.89
PEF1-204ENST00000472443 KCNQ3O43525 872 aa20.61■□□□□ 0.89
PEF1-204ENST00000472443 SENP3-EIF4A1A0A087X0R7 540 aa20.6■□□□□ 0.89
PEF1-204ENST00000472443 CHRNA5P30532 468 aa20.6■□□□□ 0.89
PEF1-204ENST00000472443 DALRD3Q5D0E6 543 aaKnown RBP20.6■□□□□ 0.89
PEF1-204ENST00000472443 ARHGAP27Q6ZUM4 889 aa20.6■□□□□ 0.89
PEF1-204ENST00000472443 MCM10Q7L590 875 aa20.6■□□□□ 0.89
PEF1-204ENST00000472443 ZNF526Q8TF50 670 aaPredicted RBP20.6■□□□□ 0.89
PEF1-204ENST00000472443 HTATSF1O43719 755 aaKnown RBP20.59■□□□□ 0.89
PEF1-204ENST00000472443 SERPINB2P05120 415 aa20.58■□□□□ 0.89
PEF1-204ENST00000472443 IL6STP40189 918 aaPredicted RBP20.58■□□□□ 0.89
PEF1-204ENST00000472443 ZNF330Q9Y3S2 320 aaPredicted RBP20.58■□□□□ 0.89
PEF1-204ENST00000472443 NRXN2Q9P2S2 1712 aa20.58■□□□□ 0.88
PEF1-204ENST00000472443 A1BGP04217 495 aa20.57■□□□□ 0.88
PEF1-204ENST00000472443 ARFGEF1Q9Y6D6 1849 aa20.56■□□□□ 0.88
PEF1-204ENST00000472443 DCTN1Q14203 1278 aa20.56■□□□□ 0.88
PEF1-204ENST00000472443 TBC1D2BQ9UPU7 963 aa20.56■□□□□ 0.88
PEF1-204ENST00000472443 SCN7AQ01118 1682 aa20.56■□□□□ 0.88
PEF1-204ENST00000472443 AFDNP55196 1824 aaKnown RBP20.55■□□□□ 0.88
PEF1-204ENST00000472443 NEFMP07197 916 aa20.55■□□□□ 0.88
PEF1-204ENST00000472443 BICDL1Q6ZP65 573 aa20.55■□□□□ 0.88
PEF1-204ENST00000472443 NPM2Q86SE8 214 aaKnown RBP20.55■□□□□ 0.88
PEF1-204ENST00000472443 TBC1D9BQ66K14 1250 aa20.54■□□□□ 0.88
PEF1-204ENST00000472443 USP16Q9Y5T5 823 aa20.54■□□□□ 0.88
PEF1-204ENST00000472443 SNRPA1P09661 255 aaKnown RBP20.53■□□□□ 0.88
PEF1-204ENST00000472443 CARMIL3Q8ND23 1372 aa20.53■□□□□ 0.88
PEF1-204ENST00000472443 PRAMEF22A3QJZ6 481 aa20.52■□□□□ 0.88
PEF1-204ENST00000472443 CAMTA2O94983 1202 aa20.52■□□□□ 0.88
PEF1-204ENST00000472443 TAF7Q15545 349 aaPredicted RBP20.52■□□□□ 0.88
PEF1-204ENST00000472443 C9orf131Q5VYM1 1079 aa20.52■□□□□ 0.88
PEF1-204ENST00000472443 PLEKHF1Q96S99 279 aa20.52■□□□□ 0.88
PEF1-204ENST00000472443 DZIP3Q86Y13 1208 aaKnown RBP20.51■□□□□ 0.87
PEF1-204ENST00000472443 PIP4K2AP48426 406 aaPredicted RBP20.5■□□□□ 0.87
PEF1-204ENST00000472443 C2CD5Q86YS7 1000 aa20.5■□□□□ 0.87
PEF1-204ENST00000472443 H0YIN7 160 aa20.49■□□□□ 0.87
PEF1-204ENST00000472443 KIF3CO14782 793 aa20.49■□□□□ 0.87
PEF1-204ENST00000472443 RALBP1Q15311 655 aa20.49■□□□□ 0.87
PEF1-204ENST00000472443 NFE2L2Q16236 605 aa20.49■□□□□ 0.87
PEF1-204ENST00000472443 PNNQ9H307 717 aaKnown RBP20.49■□□□□ 0.87
PEF1-204ENST00000472443 PRR5LQ6MZQ0 368 aa20.48■□□□□ 0.87
PEF1-204ENST00000472443 TTLL6Q8N841 843 aa20.48■□□□□ 0.87
PEF1-204ENST00000472443 SETDB2Q96T68 719 aa20.48■□□□□ 0.87
PEF1-204ENST00000472443 DLEC1Q9Y238 1755 aa20.48■□□□□ 0.87
PEF1-204ENST00000472443 BCORQ6W2J9 1755 aa20.47■□□□□ 0.87
PEF1-204ENST00000472443 PNISRQ8TF01 805 aaKnown RBP20.47■□□□□ 0.87
PEF1-204ENST00000472443 BRIP1Q9BX63 1249 aa20.47■□□□□ 0.87
PEF1-204ENST00000472443 MIS18AQ9NYP9 233 aa20.47■□□□□ 0.87
PEF1-204ENST00000472443 RNF181Q9P0P0 153 aa20.47■□□□□ 0.87
PEF1-204ENST00000472443 MAPK8IP3Q9UPT6 1336 aa20.47■□□□□ 0.87
PEF1-204ENST00000472443 CEP350Q5VT06 3117 aa20.47■□□□□ 0.87
PEF1-204ENST00000472443 NBPF26B4DH59 902 aa20.46■□□□□ 0.87
PEF1-204ENST00000472443 PDE6BP35913 854 aa20.46■□□□□ 0.87
PEF1-204ENST00000472443 NBPF10Q6P3W6 841 aaKnown RBP20.46■□□□□ 0.87
PEF1-204ENST00000472443 NBPF15Q8N660 670 aa20.46■□□□□ 0.87
PEF1-204ENST00000472443 CNBD1Q8NA66 436 aa20.46■□□□□ 0.87
PEF1-204ENST00000472443 PDZRN3Q9UPQ7 1066 aa20.46■□□□□ 0.87
PEF1-204ENST00000472443 CLEC4GQ6UXB4 293 aa20.45■□□□□ 0.86
PEF1-204ENST00000472443 ZNF652Q9Y2D9 606 aa20.45■□□□□ 0.86
PEF1-204ENST00000472443 DLG5Q8TDM6 1919 aa20.45■□□□□ 0.86
PEF1-204ENST00000472443 ANKRD31Q8N7Z5 1873 aa20.44■□□□□ 0.86
PEF1-204ENST00000472443 RGL2O15211 777 aa20.44■□□□□ 0.86
PEF1-204ENST00000472443 RASSF7Q02833 373 aa20.44■□□□□ 0.86
PEF1-204ENST00000472443 DDX10Q13206 875 aaKnown RBP20.44■□□□□ 0.86
PEF1-204ENST00000472443 CCDC24Q8N4L8 307 aa20.44■□□□□ 0.86
PEF1-204ENST00000472443 THUMPD2Q9BTF0 503 aaKnown RBP20.44■□□□□ 0.86
PEF1-204ENST00000472443 NPHP1O15259 732 aa20.43■□□□□ 0.86
PEF1-204ENST00000472443 ST5P78524 1137 aa20.43■□□□□ 0.86
PEF1-204ENST00000472443 NMRK2Q9NPI5 230 aa20.43■□□□□ 0.86
PEF1-204ENST00000472443 KDM3BQ7LBC6 1761 aa20.42■□□□□ 0.86
PEF1-204ENST00000472443 HSPA6P17066 643 aa20.42■□□□□ 0.86
PEF1-204ENST00000472443 ZNF622Q969S3 477 aaKnown RBP eCLIP20.42■□□□□ 0.86
PEF1-204ENST00000472443 LAMB4A4D0S4 1761 aa20.41■□□□□ 0.86
PEF1-204ENST00000472443 EIF4A1P60842 406 aaKnown RBP20.41■□□□□ 0.86
PEF1-204ENST00000472443 COL11A2P13942 1736 aaPredicted RBP20.41■□□□□ 0.86
PEF1-204ENST00000472443 LMNB1P20700 586 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms