RNA–Protein interactions for RNA: ENST00000472411.1

TMEM9-208, Transcript of transmembrane protein 9, human

TSL 2

Gene TMEM9, Length 2,892 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM9-208	ENST00000472411	SURF6	O75683	361 aa	Known RBP	12.85	□□□□□ -0.35
TMEM9-208	ENST00000472411	PPP1R42	Q7Z4L9	355 aa		12.85	□□□□□ -0.35
TMEM9-208	ENST00000472411	PHAX	Q9H814	394 aa	Known RBP	12.85	□□□□□ -0.35
TMEM9-208	ENST00000472411	TAF7	Q15545	349 aa	Predicted RBP	12.84	□□□□□ -0.35
TMEM9-208	ENST00000472411	SLC26A8	Q96RN1	970 aa		12.84	□□□□□ -0.35
TMEM9-208	ENST00000472411	TNR	Q92752	1358 aa		12.84	□□□□□ -0.35
TMEM9-208	ENST00000472411	FAM208A	Q9UK61	1670 aa	Known RBP	12.84	□□□□□ -0.35
TMEM9-208	ENST00000472411	UQCRHL	A0A096LP55	91 aa		12.84	□□□□□ -0.35
TMEM9-208	ENST00000472411	UQCRH	P07919	91 aa		12.84	□□□□□ -0.35
TMEM9-208	ENST00000472411	NGDN	Q8NEJ9	315 aa	Known RBP	12.84	□□□□□ -0.35
TMEM9-208	ENST00000472411	PI4K2B	Q8TCG2	481 aa		12.84	□□□□□ -0.35
TMEM9-208	ENST00000472411	FAM13B	Q9NYF5	915 aa		12.84	□□□□□ -0.35
TMEM9-208	ENST00000472411	SGSM2	O43147	1006 aa		12.83	□□□□□ -0.35
TMEM9-208	ENST00000472411	PTMA	P06454	111 aa	Known RBP	12.83	□□□□□ -0.35
TMEM9-208	ENST00000472411	LARP6	Q9BRS8	491 aa	Known RBP	12.83	□□□□□ -0.35
TMEM9-208	ENST00000472411	SNX14	Q9Y5W7	946 aa		12.83	□□□□□ -0.35
TMEM9-208	ENST00000472411	DIP2B	Q9P265	1576 aa		12.83	□□□□□ -0.36
TMEM9-208	ENST00000472411	RAB11FIP3	O75154	756 aa		12.83	□□□□□ -0.36
TMEM9-208	ENST00000472411	RASEF	Q8IZ41	740 aa		12.83	□□□□□ -0.36
TMEM9-208	ENST00000472411	RHPN1	Q8TCX5	695 aa		12.83	□□□□□ -0.36
TMEM9-208	ENST00000472411	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12.83	□□□□□ -0.36
TMEM9-208	ENST00000472411	PHF14	O94880	888 aa		12.83	□□□□□ -0.36
TMEM9-208	ENST00000472411	POLA2	Q14181	598 aa		12.83	□□□□□ -0.36
TMEM9-208	ENST00000472411	RGPD8	O14715	1765 aa	Predicted RBP	12.82	□□□□□ -0.36
TMEM9-208	ENST00000472411	TPRN	Q4KMQ1	711 aa		12.82	□□□□□ -0.36
TMEM9-208	ENST00000472411	HDGFL1	Q5TGJ6	251 aa		12.82	□□□□□ -0.36
TMEM9-208	ENST00000472411	MPND	Q8N594	471 aa		12.82	□□□□□ -0.36
TMEM9-208	ENST00000472411	TTC14	Q96N46	770 aa		12.82	□□□□□ -0.36
TMEM9-208	ENST00000472411	CNPY2	Q9Y2B0	182 aa		12.82	□□□□□ -0.36
TMEM9-208	ENST00000472411	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
TMEM9-208	ENST00000472411	UBR1	Q8IWV7	1749 aa		12.82	□□□□□ -0.36
TMEM9-208	ENST00000472411	RAD50	Q92878	1312 aa		12.82	□□□□□ -0.36
TMEM9-208	ENST00000472411	AK2	P54819	239 aa		12.82	□□□□□ -0.36
TMEM9-208	ENST00000472411	NLRP6	P59044	892 aa		12.82	□□□□□ -0.36
TMEM9-208	ENST00000472411	TMEM87A	Q8NBN3	555 aa		12.82	□□□□□ -0.36
TMEM9-208	ENST00000472411	PTPRU	Q92729	1446 aa		12.82	□□□□□ -0.36
TMEM9-208	ENST00000472411	LSG1	Q9H089	658 aa	Known RBP	12.82	□□□□□ -0.36
TMEM9-208	ENST00000472411	ZSCAN22	P10073	491 aa	Predicted RBP	12.81	□□□□□ -0.36
TMEM9-208	ENST00000472411	SRGAP3	O43295	1099 aa		12.81	□□□□□ -0.36
TMEM9-208	ENST00000472411	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.81	□□□□□ -0.36
TMEM9-208	ENST00000472411	SYT1	P21579	422 aa		12.81	□□□□□ -0.36
TMEM9-208	ENST00000472411	NUTM2G	Q5VZR2	741 aa		12.81	□□□□□ -0.36
TMEM9-208	ENST00000472411	RUFY3	Q7L099	469 aa		12.81	□□□□□ -0.36
TMEM9-208	ENST00000472411	AMOTL2	Q9Y2J4	779 aa		12.81	□□□□□ -0.36
TMEM9-208	ENST00000472411	LRRC37A3	O60309	1634 aa		12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	HOXC9	P31274	260 aa		12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	UVSSA	Q2YD98	709 aa		12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	FAM184A	Q8NB25	1140 aa		12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	KIF1BP	Q96EK5	621 aa		12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	LTV1	Q96GA3	475 aa	Predicted RBP	12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	LIMCH1	Q9UPQ0	1083 aa		12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	MAP3K5	Q99683	1374 aa		12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	STX6	O43752	255 aa		12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	EIF2S2	P20042	333 aa	Known RBP	12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	CCDC183	Q5T5S1	534 aa		12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	CWC27	Q6UX04	472 aa	Known RBP	12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	ZNF830	Q96NB3	372 aa	Predicted RBP	12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	BABAM1	Q9NWV8	329 aa		12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	SPG7	Q9UQ90	795 aa		12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	PXDNL	A1KZ92	1463 aa		12.8	□□□□□ -0.36
TMEM9-208	ENST00000472411	SETD1B	Q9UPS6	1966 aa	Known RBP	12.79	□□□□□ -0.36
TMEM9-208	ENST00000472411	CPA1	P15085	419 aa		12.79	□□□□□ -0.36
TMEM9-208	ENST00000472411	KIAA2012	Q0VF49	1180 aa		12.79	□□□□□ -0.36
TMEM9-208	ENST00000472411	SASS6	Q6UVJ0	657 aa		12.79	□□□□□ -0.36
TMEM9-208	ENST00000472411	CNTROB	Q8N137	903 aa		12.79	□□□□□ -0.36
TMEM9-208	ENST00000472411	USP25	Q9UHP3	1055 aa		12.79	□□□□□ -0.36
TMEM9-208	ENST00000472411	PLEKHG1	Q9ULL1	1385 aa		12.79	□□□□□ -0.36
TMEM9-208	ENST00000472411	DYNC1I1	O14576	645 aa		12.79	□□□□□ -0.36
TMEM9-208	ENST00000472411	DTNB	O60941	627 aa		12.79	□□□□□ -0.36
TMEM9-208	ENST00000472411	HCLS1	P14317	486 aa	Predicted RBP	12.78	□□□□□ -0.36
TMEM9-208	ENST00000472411	UBE2H	P62256	183 aa		12.78	□□□□□ -0.36
TMEM9-208	ENST00000472411	SMC3	Q9UQE7	1217 aa		12.78	□□□□□ -0.36
TMEM9-208	ENST00000472411	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	12.78	□□□□□ -0.36
TMEM9-208	ENST00000472411	ZBTB7C	A1YPR0	619 aa		12.78	□□□□□ -0.36
TMEM9-208	ENST00000472411	ADCY5	O95622	1261 aa		12.78	□□□□□ -0.36
TMEM9-208	ENST00000472411	F13A1	P00488	732 aa		12.78	□□□□□ -0.36
TMEM9-208	ENST00000472411	USHBP1	Q8N6Y0	703 aa		12.78	□□□□□ -0.36
TMEM9-208	ENST00000472411	MAP7D2	Q96T17	732 aa		12.78	□□□□□ -0.36
TMEM9-208	ENST00000472411	PIK3C2A	O00443	1686 aa		12.77	□□□□□ -0.36
TMEM9-208	ENST00000472411	PI4KAP2	A4QPH2	592 aa		12.77	□□□□□ -0.36
TMEM9-208	ENST00000472411	LARGE1	O95461	756 aa		12.77	□□□□□ -0.36
TMEM9-208	ENST00000472411	CAST	P20810	708 aa	Known RBP	12.77	□□□□□ -0.36
TMEM9-208	ENST00000472411	BEND3	Q5T5X7	828 aa		12.77	□□□□□ -0.36
TMEM9-208	ENST00000472411	PI4KAP1	Q8N8J0	262 aa		12.77	□□□□□ -0.36
TMEM9-208	ENST00000472411	NWD1	Q149M9	1564 aa		12.77	□□□□□ -0.37
TMEM9-208	ENST00000472411	FIBP	O43427	364 aa		12.77	□□□□□ -0.37
TMEM9-208	ENST00000472411	LETM1	O95202	739 aa	Predicted RBP	12.77	□□□□□ -0.37
TMEM9-208	ENST00000472411	HYPK	Q9NX55	129 aa		12.77	□□□□□ -0.37
TMEM9-208	ENST00000472411	PTH1R	Q03431	593 aa		12.76	□□□□□ -0.37
TMEM9-208	ENST00000472411	DNAAF4	Q8WXU2	420 aa		12.76	□□□□□ -0.37
TMEM9-208	ENST00000472411	PKNOX2	Q96KN3	472 aa		12.76	□□□□□ -0.37
TMEM9-208	ENST00000472411	TTC12	Q9H892	705 aa	Predicted RBP	12.76	□□□□□ -0.37
TMEM9-208	ENST00000472411	CHPF2	Q9P2E5	772 aa		12.76	□□□□□ -0.37
TMEM9-208	ENST00000472411	EIF4A1	P60842	406 aa	Known RBP	12.75	□□□□□ -0.37
TMEM9-208	ENST00000472411	ADCK5	Q3MIX3	580 aa		12.75	□□□□□ -0.37
TMEM9-208	ENST00000472411	DNTTIP2	Q5QJE6	756 aa	Known RBP	12.75	□□□□□ -0.37
TMEM9-208	ENST00000472411	CCDC83	Q8IWF9	413 aa		12.75	□□□□□ -0.37
TMEM9-208	ENST00000472411	LGR6	Q9HBX8	967 aa		12.75	□□□□□ -0.37
TMEM9-208	ENST00000472411	ANXA1	P04083	346 aa		12.75	□□□□□ -0.37

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