RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 CAPN15O75808 1086 aa13.75□□□□□ -0.21
SCAMP3-205ENST00000472397 CYP19A1P11511 503 aaPredicted RBP13.75□□□□□ -0.21
SCAMP3-205ENST00000472397 PRELPP51888 382 aa13.75□□□□□ -0.21
SCAMP3-205ENST00000472397 NFIXQ14938 502 aa13.75□□□□□ -0.21
SCAMP3-205ENST00000472397 TIMELESSQ9UNS1 1208 aa13.75□□□□□ -0.21
SCAMP3-205ENST00000472397 SOS1Q07889 1333 aaPredicted RBP13.74□□□□□ -0.21
SCAMP3-205ENST00000472397 BCL2L12Q9HB09 334 aa13.74□□□□□ -0.21
SCAMP3-205ENST00000472397 SERPINB2P05120 415 aa13.73□□□□□ -0.21
SCAMP3-205ENST00000472397 C2CD5Q86YS7 1000 aa13.73□□□□□ -0.21
SCAMP3-205ENST00000472397 BRCA1P38398 1863 aaKnown RBP13.73□□□□□ -0.21
SCAMP3-205ENST00000472397 CARMIL3Q8ND23 1372 aa13.72□□□□□ -0.21
SCAMP3-205ENST00000472397 AMER1Q5JTC6 1135 aaPredicted RBP13.72□□□□□ -0.21
SCAMP3-205ENST00000472397 RBM46Q8TBY0 533 aaKnown RBP13.72□□□□□ -0.21
SCAMP3-205ENST00000472397 KDM2BQ8NHM5 1336 aa13.71□□□□□ -0.21
SCAMP3-205ENST00000472397 U2SURPO15042 1029 aaKnown RBP13.71□□□□□ -0.21
SCAMP3-205ENST00000472397 PIP4K2AP48426 406 aaPredicted RBP13.71□□□□□ -0.21
SCAMP3-205ENST00000472397 NARFQ9UHQ1 456 aa13.71□□□□□ -0.21
SCAMP3-205ENST00000472397 TBC1D2BQ9UPU7 963 aa13.71□□□□□ -0.21
SCAMP3-205ENST00000472397 ZNF831Q5JPB2 1677 aa13.71□□□□□ -0.21
SCAMP3-205ENST00000472397 SCN11AQ9UI33 1791 aa13.71□□□□□ -0.22
SCAMP3-205ENST00000472397 COL15A1P39059 1388 aa13.71□□□□□ -0.22
SCAMP3-205ENST00000472397 KIF7Q2M1P5 1343 aa13.7□□□□□ -0.22
SCAMP3-205ENST00000472397 ZNF622Q969S3 477 aaKnown RBP eCLIP13.7□□□□□ -0.22
SCAMP3-205ENST00000472397 ADAMTS7Q9UKP4 1686 aa13.69□□□□□ -0.22
SCAMP3-205ENST00000472397 KCNQ3O43525 872 aa13.69□□□□□ -0.22
SCAMP3-205ENST00000472397 DIAPH1O60610 1272 aaKnown RBP13.69□□□□□ -0.22
SCAMP3-205ENST00000472397 COL13A1Q5TAT6 717 aaPredicted RBP13.69□□□□□ -0.22
SCAMP3-205ENST00000472397 TBC1D9BQ66K14 1250 aa13.69□□□□□ -0.22
SCAMP3-205ENST00000472397 ARFGEF1Q9Y6D6 1849 aa13.69□□□□□ -0.22
SCAMP3-205ENST00000472397 KLRG1Q96E93 195 aa13.68□□□□□ -0.22
SCAMP3-205ENST00000472397 PLEKHG2Q9H7P9 1386 aa13.68□□□□□ -0.22
SCAMP3-205ENST00000472397 WDR90Q96KV7 1748 aa13.67□□□□□ -0.22
SCAMP3-205ENST00000472397 AFDNP55196 1824 aaKnown RBP13.67□□□□□ -0.22
SCAMP3-205ENST00000472397 H0YIN7 160 aa13.67□□□□□ -0.22
SCAMP3-205ENST00000472397 C21orf2O43822 256 aa13.67□□□□□ -0.22
SCAMP3-205ENST00000472397 A1BGP04217 495 aa13.67□□□□□ -0.22
SCAMP3-205ENST00000472397 TTC5Q8N0Z6 440 aa13.67□□□□□ -0.22
SCAMP3-205ENST00000472397 TTLL6Q8N841 843 aa13.67□□□□□ -0.22
SCAMP3-205ENST00000472397 ZNF496Q96IT1 587 aaPredicted RBP13.67□□□□□ -0.22
SCAMP3-205ENST00000472397 NFKBIEO00221 500 aa13.66□□□□□ -0.22
SCAMP3-205ENST00000472397 IL17REQ8NFR9 667 aa13.66□□□□□ -0.22
SCAMP3-205ENST00000472397 SBF1O95248 1867 aa13.65□□□□□ -0.22
SCAMP3-205ENST00000472397 PRAMEF22A3QJZ6 481 aa13.65□□□□□ -0.22
SCAMP3-205ENST00000472397 LMNB1P20700 586 aa13.65□□□□□ -0.22
SCAMP3-205ENST00000472397 FSTL1Q12841 308 aa13.65□□□□□ -0.22
SCAMP3-205ENST00000472397 SMC1BQ8NDV3 1235 aa13.65□□□□□ -0.22
SCAMP3-205ENST00000472397 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
SCAMP3-205ENST00000472397 FAM177BA6PVY3 158 aa13.64□□□□□ -0.23
SCAMP3-205ENST00000472397 NPHP1O15259 732 aa13.64□□□□□ -0.23
SCAMP3-205ENST00000472397 EIF5P55010 431 aaKnown RBP13.64□□□□□ -0.23
SCAMP3-205ENST00000472397 TEFQ10587 303 aa13.64□□□□□ -0.23
SCAMP3-205ENST00000472397 VIRMAQ69YN4 1812 aaKnown RBP13.64□□□□□ -0.23
SCAMP3-205ENST00000472397 MRC1P22897 1456 aa13.63□□□□□ -0.23
SCAMP3-205ENST00000472397 GLTPD2A6NH11 291 aa13.63□□□□□ -0.23
SCAMP3-205ENST00000472397 STARD3NLO95772 234 aa13.63□□□□□ -0.23
SCAMP3-205ENST00000472397 PRR5LQ6MZQ0 368 aa13.63□□□□□ -0.23
SCAMP3-205ENST00000472397 PHACTR3Q96KR7 559 aa13.63□□□□□ -0.23
SCAMP3-205ENST00000472397 POTECB2RU33 542 aa13.62□□□□□ -0.23
SCAMP3-205ENST00000472397 PER1O15534 1290 aaPredicted RBP13.62□□□□□ -0.23
SCAMP3-205ENST00000472397 POTEIP0CG38 1075 aa13.62□□□□□ -0.23
SCAMP3-205ENST00000472397 POTEJP0CG39 1038 aa13.62□□□□□ -0.23
SCAMP3-205ENST00000472397 VEGFAP15692 232 aaPredicted RBP13.62□□□□□ -0.23
SCAMP3-205ENST00000472397 CCDC88AQ3V6T2 1871 aa13.61□□□□□ -0.23
SCAMP3-205ENST00000472397 GNAT3A8MTJ3 354 aa13.61□□□□□ -0.23
SCAMP3-205ENST00000472397 DDNO94850 711 aaPredicted RBP13.61□□□□□ -0.23
SCAMP3-205ENST00000472397 ERFEQ4G0M1 354 aa13.61□□□□□ -0.23
SCAMP3-205ENST00000472397 ZNF790Q6PG37 636 aa13.61□□□□□ -0.23
SCAMP3-205ENST00000472397 HEG1Q9ULI3 1381 aa13.6□□□□□ -0.23
SCAMP3-205ENST00000472397 A0A087WZG4 1122 aa13.6□□□□□ -0.23
SCAMP3-205ENST00000472397 HSPA1AP0DMV8 641 aaKnown RBP13.6□□□□□ -0.23
SCAMP3-205ENST00000472397 HSPA1BP0DMV9 641 aaKnown RBP13.6□□□□□ -0.23
SCAMP3-205ENST00000472397 PRKAR2BP31323 418 aa13.6□□□□□ -0.23
SCAMP3-205ENST00000472397 DCTN1Q14203 1278 aa13.6□□□□□ -0.23
SCAMP3-205ENST00000472397 OLFM4Q6UX06 510 aa13.6□□□□□ -0.23
SCAMP3-205ENST00000472397 TNS4Q8IZW8 715 aa13.6□□□□□ -0.23
SCAMP3-205ENST00000472397 VSIG10Q8N0Z9 540 aa13.6□□□□□ -0.23
SCAMP3-205ENST00000472397 JMYQ8N9B5 988 aa13.6□□□□□ -0.23
SCAMP3-205ENST00000472397 MKRN1Q9UHC7 482 aaKnown RBP13.6□□□□□ -0.23
SCAMP3-205ENST00000472397 USP16Q9Y5T5 823 aa13.6□□□□□ -0.23
SCAMP3-205ENST00000472397 ANKRD31Q8N7Z5 1873 aa13.59□□□□□ -0.23
SCAMP3-205ENST00000472397 BTBD11A6QL63 1104 aa13.59□□□□□ -0.23
SCAMP3-205ENST00000472397 MCM10Q7L590 875 aa13.59□□□□□ -0.23
SCAMP3-205ENST00000472397 DZIP3Q86Y13 1208 aaKnown RBP13.59□□□□□ -0.23
SCAMP3-205ENST00000472397 SETDB2Q96T68 719 aa13.59□□□□□ -0.23
SCAMP3-205ENST00000472397 BRIP1Q9BX63 1249 aa13.59□□□□□ -0.23
SCAMP3-205ENST00000472397 TNRC6CQ9HCJ0 1690 aaKnown RBP13.59□□□□□ -0.23
SCAMP3-205ENST00000472397 TIAM2Q8IVF5 1701 aa13.59□□□□□ -0.23
SCAMP3-205ENST00000472397 NRXN2Q9P2S2 1712 aa13.59□□□□□ -0.23
SCAMP3-205ENST00000472397 CAMTA2O94983 1202 aa13.58□□□□□ -0.24
SCAMP3-205ENST00000472397 PDE6BP35913 854 aa13.58□□□□□ -0.24
SCAMP3-205ENST00000472397 NPM2Q86SE8 214 aaKnown RBP13.58□□□□□ -0.24
SCAMP3-205ENST00000472397 NGEFQ8N5V2 710 aa13.58□□□□□ -0.24
SCAMP3-205ENST00000472397 CNBD1Q8NA66 436 aa13.58□□□□□ -0.24
SCAMP3-205ENST00000472397 GAS2L2Q8NHY3 880 aa13.58□□□□□ -0.24
SCAMP3-205ENST00000472397 FMNL2Q96PY5 1086 aa13.58□□□□□ -0.24
SCAMP3-205ENST00000472397 MIS18AQ9NYP9 233 aa13.58□□□□□ -0.24
SCAMP3-205ENST00000472397 COL3A1P02461 1466 aaPredicted RBP13.58□□□□□ -0.24
SCAMP3-205ENST00000472397 COL11A2P13942 1736 aaPredicted RBP13.58□□□□□ -0.24
SCAMP3-205ENST00000472397 PRPF40BQ6NWY9 871 aaKnown RBP13.57□□□□□ -0.24
SCAMP3-205ENST00000472397 PIAS4Q8N2W9 510 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms