RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 ARHGAP27Q6ZUM4 889 aa13.26□□□□□ -0.29
NUDCD3-205ENST00000472246 TM4SF1P30408 202 aa13.25□□□□□ -0.29
NUDCD3-205ENST00000472246 CHRNA5P30532 468 aa13.25□□□□□ -0.29
NUDCD3-205ENST00000472246 KIF3CO14782 793 aa13.24□□□□□ -0.29
NUDCD3-205ENST00000472246 IL17REQ8NFR9 667 aa13.24□□□□□ -0.29
NUDCD3-205ENST00000472246 BCL2L12Q9HB09 334 aa13.24□□□□□ -0.29
NUDCD3-205ENST00000472246 PIM2Q9P1W9 311 aa13.24□□□□□ -0.29
NUDCD3-205ENST00000472246 NARFQ9UHQ1 456 aa13.24□□□□□ -0.29
NUDCD3-205ENST00000472246 NRXN2Q9P2S2 1712 aa13.24□□□□□ -0.29
NUDCD3-205ENST00000472246 GNAT3A8MTJ3 354 aa13.23□□□□□ -0.29
NUDCD3-205ENST00000472246 CANXP27824 592 aaKnown RBP13.23□□□□□ -0.29
NUDCD3-205ENST00000472246 NFIXQ14938 502 aa13.23□□□□□ -0.29
NUDCD3-205ENST00000472246 TTC5Q8N0Z6 440 aa13.23□□□□□ -0.29
NUDCD3-205ENST00000472246 VSIG10Q8N0Z9 540 aa13.23□□□□□ -0.29
NUDCD3-205ENST00000472246 GAS2L2Q8NHY3 880 aa13.23□□□□□ -0.29
NUDCD3-205ENST00000472246 TEFQ10587 303 aa13.22□□□□□ -0.29
NUDCD3-205ENST00000472246 DALRD3Q5D0E6 543 aaKnown RBP13.22□□□□□ -0.29
NUDCD3-205ENST00000472246 ZNF496Q96IT1 587 aaPredicted RBP13.22□□□□□ -0.29
NUDCD3-205ENST00000472246 SCN7AQ01118 1682 aa13.21□□□□□ -0.29
NUDCD3-205ENST00000472246 CARMIL3Q8ND23 1372 aa13.21□□□□□ -0.29
NUDCD3-205ENST00000472246 HEG1Q9ULI3 1381 aa13.21□□□□□ -0.29
NUDCD3-205ENST00000472246 HSPA6P17066 643 aa13.21□□□□□ -0.29
NUDCD3-205ENST00000472246 PRKAR2BP31323 418 aa13.21□□□□□ -0.29
NUDCD3-205ENST00000472246 C9orf131Q5VYM1 1079 aa13.21□□□□□ -0.29
NUDCD3-205ENST00000472246 ZNF790Q6PG37 636 aa13.21□□□□□ -0.29
NUDCD3-205ENST00000472246 PHACTR3Q96KR7 559 aa13.21□□□□□ -0.29
NUDCD3-205ENST00000472246 RSPH6AQ9H0K4 717 aa13.21□□□□□ -0.29
NUDCD3-205ENST00000472246 DLEC1Q9Y238 1755 aa13.2□□□□□ -0.3
NUDCD3-205ENST00000472246 STARD3NLO95772 234 aa13.2□□□□□ -0.3
NUDCD3-205ENST00000472246 SERPINB2P05120 415 aa13.2□□□□□ -0.3
NUDCD3-205ENST00000472246 EIF5P55010 431 aaKnown RBP13.2□□□□□ -0.3
NUDCD3-205ENST00000472246 BICDL1Q6ZP65 573 aa13.2□□□□□ -0.3
NUDCD3-205ENST00000472246 CEMIPQ8WUJ3 1361 aa13.2□□□□□ -0.3
NUDCD3-205ENST00000472246 KCNQ3O43525 872 aa13.19□□□□□ -0.3
NUDCD3-205ENST00000472246 PPP2R1AP30153 589 aa13.19□□□□□ -0.3
NUDCD3-205ENST00000472246 CFAP53Q96M91 514 aa13.19□□□□□ -0.3
NUDCD3-205ENST00000472246 NMRK2Q9NPI5 230 aa13.19□□□□□ -0.3
NUDCD3-205ENST00000472246 ZNF330Q9Y3S2 320 aaPredicted RBP13.19□□□□□ -0.3
NUDCD3-205ENST00000472246 RASSF7Q02833 373 aa13.18□□□□□ -0.3
NUDCD3-205ENST00000472246 RNF181Q9P0P0 153 aa13.18□□□□□ -0.3
NUDCD3-205ENST00000472246 SBF1O95248 1867 aa13.18□□□□□ -0.3
NUDCD3-205ENST00000472246 ANKRD31Q8N7Z5 1873 aa13.17□□□□□ -0.3
NUDCD3-205ENST00000472246 BTBD11A6QL63 1104 aa13.17□□□□□ -0.3
NUDCD3-205ENST00000472246 TBC1D9BQ66K14 1250 aa13.17□□□□□ -0.3
NUDCD3-205ENST00000472246 FMNL2Q96PY5 1086 aa13.17□□□□□ -0.3
NUDCD3-205ENST00000472246 TBC1D2BQ9UPU7 963 aa13.17□□□□□ -0.3
NUDCD3-205ENST00000472246 BCORQ6W2J9 1755 aa13.17□□□□□ -0.3
NUDCD3-205ENST00000472246 COL11A2P13942 1736 aaPredicted RBP13.16□□□□□ -0.3
NUDCD3-205ENST00000472246 A0A087WZG4 1122 aa13.16□□□□□ -0.3
NUDCD3-205ENST00000472246 A1BGP04217 495 aa13.16□□□□□ -0.3
NUDCD3-205ENST00000472246 U2AF1L5P0DN76 240 aaPredicted RBP13.16□□□□□ -0.3
NUDCD3-205ENST00000472246 U2AF1Q01081 240 aaKnown RBP eCLIP13.16□□□□□ -0.3
NUDCD3-205ENST00000472246 TEX13AQ9BXU3 409 aaPredicted RBP13.16□□□□□ -0.3
NUDCD3-205ENST00000472246 NUDCQ9Y266 331 aa13.16□□□□□ -0.3
NUDCD3-205ENST00000472246 PRAMEF22A3QJZ6 481 aa13.15□□□□□ -0.3
NUDCD3-205ENST00000472246 TOMM70O94826 608 aa13.15□□□□□ -0.3
NUDCD3-205ENST00000472246 IL6STP40189 918 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-205ENST00000472246 PIP4K2AP48426 406 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-205ENST00000472246 MCM10Q7L590 875 aa13.15□□□□□ -0.3
NUDCD3-205ENST00000472246 C2CD5Q86YS7 1000 aa13.15□□□□□ -0.3
NUDCD3-205ENST00000472246 CCDC24Q8N4L8 307 aa13.15□□□□□ -0.3
NUDCD3-205ENST00000472246 PRELPP51888 382 aa13.14□□□□□ -0.31
NUDCD3-205ENST00000472246 DCTN1Q14203 1278 aa13.14□□□□□ -0.31
NUDCD3-205ENST00000472246 TIAM2Q8IVF5 1701 aa13.13□□□□□ -0.31
NUDCD3-205ENST00000472246 TNRC6CQ9HCJ0 1690 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-205ENST00000472246 H0YIN7 160 aa13.13□□□□□ -0.31
NUDCD3-205ENST00000472246 CAMTA2O94983 1202 aa13.13□□□□□ -0.31
NUDCD3-205ENST00000472246 PRR5LQ6MZQ0 368 aa13.13□□□□□ -0.31
NUDCD3-205ENST00000472246 TTLL6Q8N841 843 aa13.13□□□□□ -0.31
NUDCD3-205ENST00000472246 RTF1Q92541 710 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-205ENST00000472246 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
NUDCD3-205ENST00000472246 CACNA1SQ13698 1873 aa13.12□□□□□ -0.31
NUDCD3-205ENST00000472246 CCDC88AQ3V6T2 1871 aa13.12□□□□□ -0.31
NUDCD3-205ENST00000472246 KDM2BQ8NHM5 1336 aa13.12□□□□□ -0.31
NUDCD3-205ENST00000472246 NFKBIEO00221 500 aa13.11□□□□□ -0.31
NUDCD3-205ENST00000472246 NPM2Q86SE8 214 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-205ENST00000472246 DZIP3Q86Y13 1208 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-205ENST00000472246 C16orf71Q8IYS4 520 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-205ENST00000472246 ZNF622Q969S3 477 aaKnown RBP eCLIP13.11□□□□□ -0.31
NUDCD3-205ENST00000472246 RRAGCQ9HB90 399 aa13.11□□□□□ -0.31
NUDCD3-205ENST00000472246 ZNF219Q9P2Y4 722 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-205ENST00000472246 WDR90Q96KV7 1748 aa13.1□□□□□ -0.31
NUDCD3-205ENST00000472246 DLG5Q8TDM6 1919 aa13.1□□□□□ -0.31
NUDCD3-205ENST00000472246 LMNB1P20700 586 aa13.1□□□□□ -0.31
NUDCD3-205ENST00000472246 APLP1P51693 650 aa13.1□□□□□ -0.31
NUDCD3-205ENST00000472246 CNBD1Q8NA66 436 aa13.1□□□□□ -0.31
NUDCD3-205ENST00000472246 RBM46Q8TBY0 533 aaKnown RBP13.1□□□□□ -0.31
NUDCD3-205ENST00000472246 SETDB2Q96T68 719 aa13.1□□□□□ -0.31
NUDCD3-205ENST00000472246 BRIP1Q9BX63 1249 aa13.1□□□□□ -0.31
NUDCD3-205ENST00000472246 LAMB4A4D0S4 1761 aa13.09□□□□□ -0.31
NUDCD3-205ENST00000472246 SNRPA1P09661 255 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-205ENST00000472246 PDE6BP35913 854 aa13.09□□□□□ -0.31
NUDCD3-205ENST00000472246 FER1L6Q2WGJ9 1857 aa13.09□□□□□ -0.31
NUDCD3-205ENST00000472246 MIS18AQ9NYP9 233 aa13.09□□□□□ -0.31
NUDCD3-205ENST00000472246 KDM3BQ7LBC6 1761 aa13.08□□□□□ -0.32
NUDCD3-205ENST00000472246 NBPF26B4DH59 902 aa13.08□□□□□ -0.32
NUDCD3-205ENST00000472246 NPHP1O15259 732 aa13.08□□□□□ -0.32
NUDCD3-205ENST00000472246 C21orf2O43822 256 aa13.08□□□□□ -0.32
NUDCD3-205ENST00000472246 HTRA3P83110 453 aa13.08□□□□□ -0.32
NUDCD3-205ENST00000472246 NBPF10Q6P3W6 841 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms