RNA–Protein interactions for RNA: ENST00000471917.1

LPP-213, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-213ENST00000471917 NOB1Q9ULX3 412 aaKnown RBP11.96□□□□□ -0.49
LPP-213ENST00000471917 PCDHB15Q9Y5E8 787 aa11.96□□□□□ -0.49
LPP-213ENST00000471917 COL5A3P25940 1745 aaPredicted RBP11.96□□□□□ -0.49
LPP-213ENST00000471917 ZNF853P0CG23 659 aa11.95□□□□□ -0.5
LPP-213ENST00000471917 C1QTNF8P60827 252 aa11.95□□□□□ -0.5
LPP-213ENST00000471917 HDAC1Q13547 482 aaPredicted RBP11.95□□□□□ -0.5
LPP-213ENST00000471917 IP6K1Q92551 441 aa11.95□□□□□ -0.5
LPP-213ENST00000471917 MAP3K19Q56UN5 1328 aa11.94□□□□□ -0.5
LPP-213ENST00000471917 SKAP1Q86WV1 359 aa11.94□□□□□ -0.5
LPP-213ENST00000471917 ITPRIPQ8IWB1 547 aa11.94□□□□□ -0.5
LPP-213ENST00000471917 PHACTR3Q96KR7 559 aa11.94□□□□□ -0.5
LPP-213ENST00000471917 CFAP44Q96MT7 982 aa11.94□□□□□ -0.5
LPP-213ENST00000471917 C4AP0C0L4 1744 aa11.94□□□□□ -0.5
LPP-213ENST00000471917 FBLN1P23142 703 aa11.93□□□□□ -0.5
LPP-213ENST00000471917 RRS1Q15050 365 aaKnown RBP11.93□□□□□ -0.5
LPP-213ENST00000471917 PDZRN3Q9UPQ7 1066 aa11.93□□□□□ -0.5
LPP-213ENST00000471917 TNNQ9UQP3 1299 aa11.93□□□□□ -0.5
LPP-213ENST00000471917 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
LPP-213ENST00000471917 VAMP4O75379 141 aa11.92□□□□□ -0.5
LPP-213ENST00000471917 HOXC9P31274 260 aa11.92□□□□□ -0.5
LPP-213ENST00000471917 RTL5Q5HYW3 569 aaPredicted RBP11.92□□□□□ -0.5
LPP-213ENST00000471917 NLGN2Q8NFZ4 835 aa11.92□□□□□ -0.5
LPP-213ENST00000471917 UPF2Q9HAU5 1272 aaKnown RBP11.92□□□□□ -0.5
LPP-213ENST00000471917 ARFGEF1Q9Y6D6 1849 aa11.91□□□□□ -0.5
LPP-213ENST00000471917 EIF4A2Q14240 407 aaKnown RBP11.91□□□□□ -0.5
LPP-213ENST00000471917 MRPL50Q8N5N7 158 aaKnown RBP11.91□□□□□ -0.5
LPP-213ENST00000471917 API5Q9BZZ5 524 aaKnown RBP11.91□□□□□ -0.5
LPP-213ENST00000471917 ZBTB40Q9NUA8 1239 aa11.91□□□□□ -0.5
LPP-213ENST00000471917 VIRMAQ69YN4 1812 aaKnown RBP11.9□□□□□ -0.5
LPP-213ENST00000471917 YBX3P16989 372 aaKnown RBP eCLIP11.9□□□□□ -0.5
LPP-213ENST00000471917 TMEM57Q8N5G2 664 aa11.9□□□□□ -0.5
LPP-213ENST00000471917 MBIPQ9NS73 344 aa11.9□□□□□ -0.5
LPP-213ENST00000471917 KIF24Q5T7B8 1368 aa11.9□□□□□ -0.5
LPP-213ENST00000471917 N4BP2Q86UW6 1770 aaPredicted RBP11.9□□□□□ -0.51
LPP-213ENST00000471917 KCNQ4P56696 695 aa11.89□□□□□ -0.51
LPP-213ENST00000471917 TWISTNBQ3B726 338 aaPredicted RBP11.89□□□□□ -0.51
LPP-213ENST00000471917 SULT6B1Q6IMI4 303 aa11.89□□□□□ -0.51
LPP-213ENST00000471917 SMC5Q8IY18 1101 aa11.89□□□□□ -0.51
LPP-213ENST00000471917 ATP10DQ9P241 1426 aa11.88□□□□□ -0.51
LPP-213ENST00000471917 PRIM1P49642 420 aaKnown RBP11.88□□□□□ -0.51
LPP-213ENST00000471917 FLT4P35916 1363 aa11.88□□□□□ -0.51
LPP-213ENST00000471917 ADAMTS7Q9UKP4 1686 aa11.87□□□□□ -0.51
LPP-213ENST00000471917 MYH14Q7Z406 1995 aaKnown RBP11.87□□□□□ -0.51
LPP-213ENST00000471917 POLD1P28340 1107 aa11.87□□□□□ -0.51
LPP-213ENST00000471917 BECN1Q14457 450 aa11.87□□□□□ -0.51
LPP-213ENST00000471917 HTATSF1O43719 755 aaKnown RBP11.86□□□□□ -0.51
LPP-213ENST00000471917 GIGYF1O75420 1035 aaPredicted RBP11.86□□□□□ -0.51
LPP-213ENST00000471917 GPR162Q16538 588 aa11.86□□□□□ -0.51
LPP-213ENST00000471917 NBPF6Q5VWK0 638 aa11.86□□□□□ -0.51
LPP-213ENST00000471917 COL23A1Q86Y22 540 aaPredicted RBP11.86□□□□□ -0.51
LPP-213ENST00000471917 ZCRB1Q8TBF4 217 aaKnown RBP11.86□□□□□ -0.51
LPP-213ENST00000471917 DDX54Q8TDD1 881 aaKnown RBP11.86□□□□□ -0.51
LPP-213ENST00000471917 GCC1Q96CN9 775 aa11.86□□□□□ -0.51
LPP-213ENST00000471917 NBPF4Q96M43 638 aa11.86□□□□□ -0.51
LPP-213ENST00000471917 THUMPD2Q9BTF0 503 aaKnown RBP11.86□□□□□ -0.51
LPP-213ENST00000471917 TFCP2L1Q9NZI6 479 aa11.86□□□□□ -0.51
LPP-213ENST00000471917 CCNL1Q9UK58 526 aaPredicted RBP11.86□□□□□ -0.51
LPP-213ENST00000471917 PALLDQ8WX93 1383 aa11.86□□□□□ -0.51
LPP-213ENST00000471917 ABCC4O15439 1325 aa11.86□□□□□ -0.51
LPP-213ENST00000471917 CHL1O00533 1208 aa11.85□□□□□ -0.51
LPP-213ENST00000471917 AMPHP49418 695 aa11.85□□□□□ -0.51
LPP-213ENST00000471917 NBR1Q14596 966 aa11.85□□□□□ -0.51
LPP-213ENST00000471917 HSP90AB2PQ58FF8 381 aa11.85□□□□□ -0.51
LPP-213ENST00000471917 GAS2L2Q8NHY3 880 aa11.85□□□□□ -0.51
LPP-213ENST00000471917 DLG5Q8TDM6 1919 aa11.85□□□□□ -0.51
LPP-213ENST00000471917 PCDH11XQ9BZA7 1347 aa11.85□□□□□ -0.51
LPP-213ENST00000471917 PCDH11YQ9BZA8 1340 aa11.85□□□□□ -0.51
LPP-213ENST00000471917 PLEKHG2Q9H7P9 1386 aa11.84□□□□□ -0.51
LPP-213ENST00000471917 TJP1Q07157 1748 aa11.84□□□□□ -0.51
LPP-213ENST00000471917 ZBTB7BO15156 539 aaPredicted RBP11.84□□□□□ -0.51
LPP-213ENST00000471917 EIF5BO60841 1220 aaKnown RBP11.84□□□□□ -0.51
LPP-213ENST00000471917 NUCB1Q02818 461 aa11.84□□□□□ -0.51
LPP-213ENST00000471917 AMIGO3Q86WK7 504 aa11.84□□□□□ -0.51
LPP-213ENST00000471917 TSPYL6Q8N831 410 aa11.84□□□□□ -0.51
LPP-213ENST00000471917 C8orf58Q8NAV2 365 aa11.84□□□□□ -0.51
LPP-213ENST00000471917 RTF1Q92541 710 aaKnown RBP11.84□□□□□ -0.51
LPP-213ENST00000471917 DLEC1Q9Y238 1755 aa11.84□□□□□ -0.51
LPP-213ENST00000471917 WDR90Q96KV7 1748 aa11.83□□□□□ -0.52
LPP-213ENST00000471917 SBF1O95248 1867 aa11.83□□□□□ -0.52
LPP-213ENST00000471917 KDRP35968 1356 aa11.83□□□□□ -0.52
LPP-213ENST00000471917 AEBP1Q8IUX7 1158 aa11.83□□□□□ -0.52
LPP-213ENST00000471917 LTV1Q96GA3 475 aaPredicted RBP11.83□□□□□ -0.52
LPP-213ENST00000471917 PTPRCP08575 1304 aa11.83□□□□□ -0.52
LPP-213ENST00000471917 SCN11AQ9UI33 1791 aa11.82□□□□□ -0.52
LPP-213ENST00000471917 CYP27B1O15528 508 aa11.82□□□□□ -0.52
LPP-213ENST00000471917 SYTL4Q96C24 671 aaPredicted RBP11.82□□□□□ -0.52
LPP-213ENST00000471917 CD2APQ9Y5K6 639 aa11.82□□□□□ -0.52
LPP-213ENST00000471917 SOS1Q07889 1333 aaPredicted RBP11.82□□□□□ -0.52
LPP-213ENST00000471917 IGSF1Q8N6C5 1336 aa11.82□□□□□ -0.52
LPP-213ENST00000471917 PXDNLA1KZ92 1463 aa11.82□□□□□ -0.52
LPP-213ENST00000471917 ELL2O00472 640 aaPredicted RBP11.81□□□□□ -0.52
LPP-213ENST00000471917 GRIN3BO60391 1043 aa11.81□□□□□ -0.52
LPP-213ENST00000471917 INTS3Q68E01 1043 aaKnown RBP11.81□□□□□ -0.52
LPP-213ENST00000471917 CHD1LQ86WJ1 897 aa11.81□□□□□ -0.52
LPP-213ENST00000471917 USHBP1Q8N6Y0 703 aa11.81□□□□□ -0.52
LPP-213ENST00000471917 TBC1D32Q96NH3 1257 aa11.81□□□□□ -0.52
LPP-213ENST00000471917 BABAM1Q9NWV8 329 aa11.81□□□□□ -0.52
LPP-213ENST00000471917 C10orf71Q711Q0 1435 aa11.8□□□□□ -0.52
LPP-213ENST00000471917 DCTN1Q14203 1278 aa11.8□□□□□ -0.52
LPP-213ENST00000471917 MSL1Q68DK7 614 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms