RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 IVNS1ABPQ9Y6Y0 642 aa10.05□□□□□ -0.8
CD47-204ENST00000471694 DACH1Q9UI36 760 aa10.05□□□□□ -0.8
CD47-204ENST00000471694 PDE4BQ07343 736 aa10.05□□□□□ -0.8
CD47-204ENST00000471694 NBPF1Q3BBV0 1214 aa10.05□□□□□ -0.8
CD47-204ENST00000471694 DUSP27Q5VZP5 1158 aa10.05□□□□□ -0.8
CD47-204ENST00000471694 ZNF772Q68DY9 489 aaPredicted RBP10.05□□□□□ -0.8
CD47-204ENST00000471694 CIZ1Q9ULV3 898 aaPredicted RBP10.05□□□□□ -0.8
CD47-204ENST00000471694 CCDC7Q96M83 1385 aa10.04□□□□□ -0.8
CD47-204ENST00000471694 SKOR2Q2VWA4 1001 aaPredicted RBP10.04□□□□□ -0.8
CD47-204ENST00000471694 GRIPAP1Q4V328 841 aa10.04□□□□□ -0.8
CD47-204ENST00000471694 KAT6BQ8WYB5 2073 aa10.04□□□□□ -0.8
CD47-204ENST00000471694 TSPY2A6NKD2 308 aa10.04□□□□□ -0.8
CD47-204ENST00000471694 ZBTB24O43167 697 aaPredicted RBP10.04□□□□□ -0.8
CD47-204ENST00000471694 KAT14Q9H8E8 782 aa10.04□□□□□ -0.8
CD47-204ENST00000471694 EPB41L2O43491 1005 aaKnown RBP10.04□□□□□ -0.8
CD47-204ENST00000471694 ATP5J2-PTCD1G3V325 749 aa10.04□□□□□ -0.8
CD47-204ENST00000471694 PPP2R1AP30153 589 aa10.04□□□□□ -0.8
CD47-204ENST00000471694 BRDTQ58F21 947 aaPredicted RBP10.04□□□□□ -0.8
CD47-204ENST00000471694 CWC27Q6UX04 472 aaKnown RBP10.04□□□□□ -0.8
CD47-204ENST00000471694 CRNKL1Q9BZJ0 848 aaKnown RBP10.04□□□□□ -0.8
CD47-204ENST00000471694 LARGE2Q8N3Y3 721 aa10.04□□□□□ -0.8
CD47-204ENST00000471694 PRKAG2Q9UGJ0 569 aa10.04□□□□□ -0.8
CD47-204ENST00000471694 CEP131Q9UPN4 1083 aa10.04□□□□□ -0.8
CD47-204ENST00000471694 SSX2IPQ9Y2D8 614 aa10.04□□□□□ -0.8
CD47-204ENST00000471694 FANCAO15360 1455 aa10.04□□□□□ -0.8
CD47-204ENST00000471694 EHBP1L1Q8N3D4 1523 aa10.04□□□□□ -0.8
CD47-204ENST00000471694 ARHGEF6Q15052 776 aa10.03□□□□□ -0.8
CD47-204ENST00000471694 CCDC117Q8IWD4 279 aaPredicted RBP10.03□□□□□ -0.8
CD47-204ENST00000471694 IL1RAPL2Q9NP60 686 aa10.03□□□□□ -0.8
CD47-204ENST00000471694 GBP2P32456 591 aaPredicted RBP10.03□□□□□ -0.8
CD47-204ENST00000471694 TSG101Q99816 390 aa10.03□□□□□ -0.8
CD47-204ENST00000471694 RAB34Q9BZG1 259 aa10.03□□□□□ -0.8
CD47-204ENST00000471694 BIRC2Q13490 618 aa10.03□□□□□ -0.8
CD47-204ENST00000471694 MSL1Q68DK7 614 aa10.03□□□□□ -0.8
CD47-204ENST00000471694 CATIPQ7Z7H3 387 aa10.03□□□□□ -0.8
CD47-204ENST00000471694 PUF60Q9UHX1 559 aaKnown RBP10.03□□□□□ -0.8
CD47-204ENST00000471694 NSFL1CQ9UNZ2 370 aaKnown RBP10.03□□□□□ -0.8
CD47-204ENST00000471694 CETN2P41208 172 aa10.03□□□□□ -0.8
CD47-204ENST00000471694 RNF41Q9H4P4 317 aaPredicted RBP10.03□□□□□ -0.8
CD47-204ENST00000471694 ADAMTS8Q9UP79 889 aa10.03□□□□□ -0.8
CD47-204ENST00000471694 DNMBPQ6XZF7 1577 aa10.03□□□□□ -0.8
CD47-204ENST00000471694 PDCP20941 246 aa10.03□□□□□ -0.8
CD47-204ENST00000471694 DZIP3Q86Y13 1208 aaKnown RBP10.03□□□□□ -0.8
CD47-204ENST00000471694 CFTRP13569 1480 aa10.02□□□□□ -0.8
CD47-204ENST00000471694 SYCP3Q8IZU3 236 aa10.02□□□□□ -0.8
CD47-204ENST00000471694 CCDC39Q9UFE4 941 aa10.02□□□□□ -0.8
CD47-204ENST00000471694 ERICH3Q5RHP9 1530 aa10.02□□□□□ -0.8
CD47-204ENST00000471694 DAPK1P53355 1430 aa10.02□□□□□ -0.81
CD47-204ENST00000471694 KIF20AO95235 890 aa10.02□□□□□ -0.81
CD47-204ENST00000471694 TSPY3P0CV98 308 aa10.02□□□□□ -0.81
CD47-204ENST00000471694 TSPY8P0CW00 308 aa10.02□□□□□ -0.81
CD47-204ENST00000471694 RGS22Q8NE09 1264 aa10.02□□□□□ -0.81
CD47-204ENST00000471694 C19orf44Q9H6X5 657 aa10.02□□□□□ -0.81
CD47-204ENST00000471694 UQCRHP07919 91 aa10.02□□□□□ -0.81
CD47-204ENST00000471694 SNRPA1P09661 255 aaKnown RBP10.02□□□□□ -0.81
CD47-204ENST00000471694 ME1P48163 572 aa10.02□□□□□ -0.81
CD47-204ENST00000471694 NIM1KQ8IY84 436 aa10.02□□□□□ -0.81
CD47-204ENST00000471694 TXLNBQ8N3L3 684 aa10.02□□□□□ -0.81
CD47-204ENST00000471694 KIF7Q2M1P5 1343 aa10.02□□□□□ -0.81
CD47-204ENST00000471694 POLA1P09884 1462 aaPredicted RBP10.02□□□□□ -0.81
CD47-204ENST00000471694 DCTN1Q14203 1278 aa10.02□□□□□ -0.81
CD47-204ENST00000471694 PRKRIP1Q9H875 184 aaPredicted RBP10.02□□□□□ -0.81
CD47-204ENST00000471694 LAMC3Q9Y6N6 1575 aa10.02□□□□□ -0.81
CD47-204ENST00000471694 TTF1Q15361 905 aaPredicted RBP10.01□□□□□ -0.81
CD47-204ENST00000471694 QTRT2Q9H974 415 aaKnown RBP10.01□□□□□ -0.81
CD47-204ENST00000471694 ABT1Q9ULW3 272 aaKnown RBP10.01□□□□□ -0.81
CD47-204ENST00000471694 MVPQ14764 893 aaKnown RBP10.01□□□□□ -0.81
CD47-204ENST00000471694 CCDC82Q8N4S0 544 aa10.01□□□□□ -0.81
CD47-204ENST00000471694 CNBD1Q8NA66 436 aa10.01□□□□□ -0.81
CD47-204ENST00000471694 MNS1Q8NEH6 495 aa10.01□□□□□ -0.81
CD47-204ENST00000471694 NSD3Q9BZ95 1437 aa10.01□□□□□ -0.81
CD47-204ENST00000471694 H7C1D1 291 aa10.01□□□□□ -0.81
CD47-204ENST00000471694 PPP4R3BQ5MIZ7 849 aa10.01□□□□□ -0.81
CD47-204ENST00000471694 BLOC1S2Q6QNY1 142 aa10.01□□□□□ -0.81
CD47-204ENST00000471694 SLC12A7Q9Y666 1083 aa10.01□□□□□ -0.81
CD47-204ENST00000471694 DISP3Q9P2K9 1392 aa10.01□□□□□ -0.81
CD47-204ENST00000471694 CCDC12Q8WUD4 166 aaPredicted RBP10.01□□□□□ -0.81
CD47-204ENST00000471694 NEK4P51957 841 aa10□□□□□ -0.81
CD47-204ENST00000471694 NUCB2P80303 420 aa10□□□□□ -0.81
CD47-204ENST00000471694 ENOX2Q16206 610 aaKnown RBP10□□□□□ -0.81
CD47-204ENST00000471694 PPFIBP1Q86W92 1011 aa10□□□□□ -0.81
CD47-204ENST00000471694 BOLA2Q9H3K6 86 aa10□□□□□ -0.81
CD47-204ENST00000471694 MAP3K2Q9Y2U5 619 aa10□□□□□ -0.81
CD47-204ENST00000471694 SERPINC1P01008 464 aa10□□□□□ -0.81
CD47-204ENST00000471694 NFKBIBQ15653 356 aa10□□□□□ -0.81
CD47-204ENST00000471694 ZNF213O14771 459 aa10□□□□□ -0.81
CD47-204ENST00000471694 IDI1Q13907 227 aa10□□□□□ -0.81
CD47-204ENST00000471694 IQSEC3Q9UPP2 1182 aaPredicted RBP10□□□□□ -0.81
CD47-204ENST00000471694 U3KPZ7 1027 aaPredicted RBP10□□□□□ -0.81
CD47-204ENST00000471694 TTC21AQ8NDW8 1320 aa10□□□□□ -0.81
CD47-204ENST00000471694 LRRC9Q6ZRR7 1453 aa10□□□□□ -0.81
CD47-204ENST00000471694 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10□□□□□ -0.81
CD47-204ENST00000471694 CCDC194A0A1B0GVG4 234 aa10□□□□□ -0.81
CD47-204ENST00000471694 CDCA7Q9BWT1 371 aaPredicted RBP10□□□□□ -0.81
CD47-204ENST00000471694 ACEP12821 1306 aa10□□□□□ -0.81
CD47-204ENST00000471694 MAGI1Q96QZ7 1491 aaPredicted RBP10□□□□□ -0.81
CD47-204ENST00000471694 CCDC196A0A1B0GTZ2 297 aa10□□□□□ -0.81
CD47-204ENST00000471694 CNGA1P29973 690 aa10□□□□□ -0.81
CD47-204ENST00000471694 JAKMIP3Q5VZ66 844 aa10□□□□□ -0.81
CD47-204ENST00000471694 SUPT20HQ8NEM7 779 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms