RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 ZBTB1Q9Y2K1 713 aa12.77□□□□□ -0.37
POLR1A-206ENST00000471427 NEFMP07197 916 aa12.76□□□□□ -0.37
POLR1A-206ENST00000471427 DDX10Q13206 875 aaKnown RBP12.76□□□□□ -0.37
POLR1A-206ENST00000471427 TAF7Q15545 349 aaPredicted RBP12.76□□□□□ -0.37
POLR1A-206ENST00000471427 TJP1Q07157 1748 aa12.76□□□□□ -0.37
POLR1A-206ENST00000471427 KCNQ3O43525 872 aa12.75□□□□□ -0.37
POLR1A-206ENST00000471427 IL6STP40189 918 aaPredicted RBP12.75□□□□□ -0.37
POLR1A-206ENST00000471427 USPL1Q5W0Q7 1092 aa12.75□□□□□ -0.37
POLR1A-206ENST00000471427 VIRMAQ69YN4 1812 aaKnown RBP12.74□□□□□ -0.37
POLR1A-206ENST00000471427 C10orf71Q711Q0 1435 aa12.74□□□□□ -0.37
POLR1A-206ENST00000471427 COL15A1P39059 1388 aa12.74□□□□□ -0.37
POLR1A-206ENST00000471427 POLRMTO00411 1230 aaKnown RBP12.74□□□□□ -0.37
POLR1A-206ENST00000471427 SNRPA1P09661 255 aaKnown RBP12.74□□□□□ -0.37
POLR1A-206ENST00000471427 KCNA3P22001 575 aa12.74□□□□□ -0.37
POLR1A-206ENST00000471427 CANXP27824 592 aaKnown RBP12.74□□□□□ -0.37
POLR1A-206ENST00000471427 DDR1Q08345 913 aa12.74□□□□□ -0.37
POLR1A-206ENST00000471427 MCM10Q7L590 875 aa12.74□□□□□ -0.37
POLR1A-206ENST00000471427 BCL2L12Q9HB09 334 aa12.74□□□□□ -0.37
POLR1A-206ENST00000471427 UBR2Q8IWV8 1755 aa12.74□□□□□ -0.37
POLR1A-206ENST00000471427 A0A0G2JLW4 131 aa12.73□□□□□ -0.37
POLR1A-206ENST00000471427 DPEP1P16444 411 aa12.73□□□□□ -0.37
POLR1A-206ENST00000471427 NFIXQ14938 502 aa12.73□□□□□ -0.37
POLR1A-206ENST00000471427 NFE2L2Q16236 605 aa12.73□□□□□ -0.37
POLR1A-206ENST00000471427 PNISRQ8TF01 805 aaKnown RBP12.73□□□□□ -0.37
POLR1A-206ENST00000471427 USP16Q9Y5T5 823 aa12.73□□□□□ -0.37
POLR1A-206ENST00000471427 KIF13BQ9NQT8 1826 aa12.73□□□□□ -0.37
POLR1A-206ENST00000471427 SIPA1L3O60292 1781 aaPredicted RBP12.72□□□□□ -0.37
POLR1A-206ENST00000471427 A1BGP04217 495 aa12.72□□□□□ -0.37
POLR1A-206ENST00000471427 DCTN1Q14203 1278 aa12.72□□□□□ -0.37
POLR1A-206ENST00000471427 PXDNLA1KZ92 1463 aa12.72□□□□□ -0.37
POLR1A-206ENST00000471427 C4AP0C0L4 1744 aa12.71□□□□□ -0.37
POLR1A-206ENST00000471427 MYBBP1AQ9BQG0 1328 aaKnown RBP12.71□□□□□ -0.37
POLR1A-206ENST00000471427 RGL2O15211 777 aa12.71□□□□□ -0.37
POLR1A-206ENST00000471427 PIM2Q9P1W9 311 aa12.71□□□□□ -0.37
POLR1A-206ENST00000471427 SERPINB2P05120 415 aa12.7□□□□□ -0.38
POLR1A-206ENST00000471427 CLEC4GQ6UXB4 293 aa12.7□□□□□ -0.38
POLR1A-206ENST00000471427 NPM2Q86SE8 214 aaKnown RBP12.7□□□□□ -0.38
POLR1A-206ENST00000471427 ZEB1P37275 1124 aaPredicted RBP12.69□□□□□ -0.38
POLR1A-206ENST00000471427 BABAM1Q9NWV8 329 aa12.69□□□□□ -0.38
POLR1A-206ENST00000471427 PDZRN3Q9UPQ7 1066 aa12.69□□□□□ -0.38
POLR1A-206ENST00000471427 TBC1D2BQ9UPU7 963 aa12.69□□□□□ -0.38
POLR1A-206ENST00000471427 BCS1LQ9Y276 419 aa12.69□□□□□ -0.38
POLR1A-206ENST00000471427 MAPK8IP3Q9UPT6 1336 aa12.68□□□□□ -0.38
POLR1A-206ENST00000471427 CAMTA2O94983 1202 aa12.68□□□□□ -0.38
POLR1A-206ENST00000471427 DALRD3Q5D0E6 543 aaKnown RBP12.68□□□□□ -0.38
POLR1A-206ENST00000471427 MIS18AQ9NYP9 233 aa12.68□□□□□ -0.38
POLR1A-206ENST00000471427 PRAMEF22A3QJZ6 481 aa12.67□□□□□ -0.38
POLR1A-206ENST00000471427 GIGYF1O75420 1035 aaPredicted RBP12.67□□□□□ -0.38
POLR1A-206ENST00000471427 EIF4A1P60842 406 aaKnown RBP12.67□□□□□ -0.38
POLR1A-206ENST00000471427 TBC1D9BQ66K14 1250 aa12.67□□□□□ -0.38
POLR1A-206ENST00000471427 PRKRIP1Q9H875 184 aaPredicted RBP12.67□□□□□ -0.38
POLR1A-206ENST00000471427 NBPF26B4DH59 902 aa12.66□□□□□ -0.38
POLR1A-206ENST00000471427 TMPOP42166 694 aaKnown RBP12.66□□□□□ -0.38
POLR1A-206ENST00000471427 RIPK4P57078 832 aa12.66□□□□□ -0.38
POLR1A-206ENST00000471427 NBPF10Q6P3W6 841 aaKnown RBP12.66□□□□□ -0.38
POLR1A-206ENST00000471427 ARHGAP27Q6ZUM4 889 aa12.66□□□□□ -0.38
POLR1A-206ENST00000471427 DZIP3Q86Y13 1208 aaKnown RBP12.66□□□□□ -0.38
POLR1A-206ENST00000471427 NBPF15Q8N660 670 aa12.66□□□□□ -0.38
POLR1A-206ENST00000471427 SETDB2Q96T68 719 aa12.66□□□□□ -0.38
POLR1A-206ENST00000471427 BRIP1Q9BX63 1249 aa12.66□□□□□ -0.38
POLR1A-206ENST00000471427 WWC3Q9ULE0 1092 aa12.66□□□□□ -0.38
POLR1A-206ENST00000471427 ADCY9O60503 1353 aa12.66□□□□□ -0.38
POLR1A-206ENST00000471427 KIAA1551Q9HCM1 1747 aa12.65□□□□□ -0.38
POLR1A-206ENST00000471427 CHRNA5P30532 468 aa12.65□□□□□ -0.38
POLR1A-206ENST00000471427 C1QTNF8P60827 252 aa12.65□□□□□ -0.38
POLR1A-206ENST00000471427 LMOD3Q0VAK6 560 aa12.65□□□□□ -0.38
POLR1A-206ENST00000471427 H0YIN7 160 aa12.64□□□□□ -0.39
POLR1A-206ENST00000471427 BICDL1Q6ZP65 573 aa12.64□□□□□ -0.39
POLR1A-206ENST00000471427 RUNDC1Q96C34 613 aa12.64□□□□□ -0.39
POLR1A-206ENST00000471427 ZNF652Q9Y2D9 606 aa12.64□□□□□ -0.39
POLR1A-206ENST00000471427 ZNF330Q9Y3S2 320 aaPredicted RBP12.64□□□□□ -0.39
POLR1A-206ENST00000471427 NRXN2Q9P2S2 1712 aa12.64□□□□□ -0.39
POLR1A-206ENST00000471427 CARMIL3Q8ND23 1372 aa12.64□□□□□ -0.39
POLR1A-206ENST00000471427 N4BP2Q86UW6 1770 aaPredicted RBP12.64□□□□□ -0.39
POLR1A-206ENST00000471427 ATP10DQ9P241 1426 aa12.63□□□□□ -0.39
POLR1A-206ENST00000471427 ERVV-1B6SEH8 477 aa12.63□□□□□ -0.39
POLR1A-206ENST00000471427 PDE6BP35913 854 aa12.63□□□□□ -0.39
POLR1A-206ENST00000471427 PRR5LQ6MZQ0 368 aa12.63□□□□□ -0.39
POLR1A-206ENST00000471427 TTLL6Q8N841 843 aa12.63□□□□□ -0.39
POLR1A-206ENST00000471427 THUMPD2Q9BTF0 503 aaKnown RBP12.63□□□□□ -0.39
POLR1A-206ENST00000471427 GPBP1L1Q9HC44 474 aaPredicted RBP12.63□□□□□ -0.39
POLR1A-206ENST00000471427 ADAMTS8Q9UP79 889 aa12.63□□□□□ -0.39
POLR1A-206ENST00000471427 BRCA1P38398 1863 aaKnown RBP12.62□□□□□ -0.39
POLR1A-206ENST00000471427 PIP4K2AP48426 406 aaPredicted RBP12.62□□□□□ -0.39
POLR1A-206ENST00000471427 WDR43Q15061 677 aaKnown RBP eCLIP12.62□□□□□ -0.39
POLR1A-206ENST00000471427 C2CD5Q86YS7 1000 aa12.62□□□□□ -0.39
POLR1A-206ENST00000471427 DLG5Q8TDM6 1919 aa12.62□□□□□ -0.39
POLR1A-206ENST00000471427 ERBB4Q15303 1308 aa12.62□□□□□ -0.39
POLR1A-206ENST00000471427 AFDNP55196 1824 aaKnown RBP12.61□□□□□ -0.39
POLR1A-206ENST00000471427 KLRG2A4D1S0 409 aaPredicted RBP12.61□□□□□ -0.39
POLR1A-206ENST00000471427 CHL1O00533 1208 aa12.61□□□□□ -0.39
POLR1A-206ENST00000471427 TPTE2Q6XPS3 522 aa12.61□□□□□ -0.39
POLR1A-206ENST00000471427 TSPYL4Q9UJ04 414 aa12.61□□□□□ -0.39
POLR1A-206ENST00000471427 CNBD1Q8NA66 436 aa12.6□□□□□ -0.39
POLR1A-206ENST00000471427 TRIM35Q9UPQ4 493 aa12.6□□□□□ -0.39
POLR1A-206ENST00000471427 ARFGEF1Q9Y6D6 1849 aa12.6□□□□□ -0.39
POLR1A-206ENST00000471427 ST5P78524 1137 aa12.59□□□□□ -0.39
POLR1A-206ENST00000471427 C9orf131Q5VYM1 1079 aa12.59□□□□□ -0.39
POLR1A-206ENST00000471427 STYK1Q6J9G0 422 aa12.59□□□□□ -0.39
POLR1A-206ENST00000471427 NIP7Q9Y221 180 aaKnown RBP eCLIP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms