RNA–Protein interactions for RNA: ENST00000471417.5

LINC01140-204, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 751 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-204ENST00000471417 DALRD3Q5D0E6 543 aaKnown RBP12.82□□□□□ -0.36
LINC01140-204ENST00000471417 C9orf131Q5VYM1 1079 aa12.82□□□□□ -0.36
LINC01140-204ENST00000471417 IL17REQ8NFR9 667 aa12.82□□□□□ -0.36
LINC01140-204ENST00000471417 NMRK2Q9NPI5 230 aa12.82□□□□□ -0.36
LINC01140-204ENST00000471417 COL3A1P02461 1466 aaPredicted RBP12.81□□□□□ -0.36
LINC01140-204ENST00000471417 CANXP27824 592 aaKnown RBP12.81□□□□□ -0.36
LINC01140-204ENST00000471417 NARFQ9UHQ1 456 aa12.81□□□□□ -0.36
LINC01140-204ENST00000471417 COL15A1P39059 1388 aa12.81□□□□□ -0.36
LINC01140-204ENST00000471417 VIRMAQ69YN4 1812 aaKnown RBP12.79□□□□□ -0.36
LINC01140-204ENST00000471417 SERPINB2P05120 415 aa12.79□□□□□ -0.36
LINC01140-204ENST00000471417 VSIG10Q8N0Z9 540 aa12.79□□□□□ -0.36
LINC01140-204ENST00000471417 ZNF496Q96IT1 587 aaPredicted RBP12.79□□□□□ -0.36
LINC01140-204ENST00000471417 NPC1L1Q9UHC9 1359 aa12.79□□□□□ -0.36
LINC01140-204ENST00000471417 GNAT3A8MTJ3 354 aa12.78□□□□□ -0.36
LINC01140-204ENST00000471417 TOMM70O94826 608 aa12.78□□□□□ -0.36
LINC01140-204ENST00000471417 PHACTR3Q96KR7 559 aa12.78□□□□□ -0.36
LINC01140-204ENST00000471417 ARFGEF1Q9Y6D6 1849 aa12.77□□□□□ -0.37
LINC01140-204ENST00000471417 KCNQ3O43525 872 aa12.77□□□□□ -0.37
LINC01140-204ENST00000471417 EIF5P55010 431 aaKnown RBP12.77□□□□□ -0.37
LINC01140-204ENST00000471417 TEFQ10587 303 aa12.77□□□□□ -0.37
LINC01140-204ENST00000471417 ZNF790Q6PG37 636 aa12.77□□□□□ -0.37
LINC01140-204ENST00000471417 BICDL1Q6ZP65 573 aa12.77□□□□□ -0.37
LINC01140-204ENST00000471417 TTC5Q8N0Z6 440 aa12.77□□□□□ -0.37
LINC01140-204ENST00000471417 RNF181Q9P0P0 153 aa12.77□□□□□ -0.37
LINC01140-204ENST00000471417 CARMIL3Q8ND23 1372 aa12.77□□□□□ -0.37
LINC01140-204ENST00000471417 STARD3NLO95772 234 aa12.76□□□□□ -0.37
LINC01140-204ENST00000471417 PRELPP51888 382 aa12.76□□□□□ -0.37
LINC01140-204ENST00000471417 RASSF7Q02833 373 aa12.76□□□□□ -0.37
LINC01140-204ENST00000471417 GAS2L2Q8NHY3 880 aa12.76□□□□□ -0.37
LINC01140-204ENST00000471417 HEG1Q9ULI3 1381 aa12.76□□□□□ -0.37
LINC01140-204ENST00000471417 UBR2Q8IWV8 1755 aa12.76□□□□□ -0.37
LINC01140-204ENST00000471417 AFDNP55196 1824 aaKnown RBP12.76□□□□□ -0.37
LINC01140-204ENST00000471417 A1BGP04217 495 aa12.75□□□□□ -0.37
LINC01140-204ENST00000471417 PRKAR2BP31323 418 aa12.75□□□□□ -0.37
LINC01140-204ENST00000471417 TBC1D9BQ66K14 1250 aa12.75□□□□□ -0.37
LINC01140-204ENST00000471417 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
LINC01140-204ENST00000471417 RSPH6AQ9H0K4 717 aa12.75□□□□□ -0.37
LINC01140-204ENST00000471417 TBC1D2BQ9UPU7 963 aa12.75□□□□□ -0.37
LINC01140-204ENST00000471417 ZNF330Q9Y3S2 320 aaPredicted RBP12.75□□□□□ -0.37
LINC01140-204ENST00000471417 NRXN2Q9P2S2 1712 aa12.74□□□□□ -0.37
LINC01140-204ENST00000471417 C2CD5Q86YS7 1000 aa12.74□□□□□ -0.37
LINC01140-204ENST00000471417 RRAGCQ9HB90 399 aa12.74□□□□□ -0.37
LINC01140-204ENST00000471417 CEMIPQ8WUJ3 1361 aa12.73□□□□□ -0.37
LINC01140-204ENST00000471417 PIP4K2AP48426 406 aaPredicted RBP12.73□□□□□ -0.37
LINC01140-204ENST00000471417 APLP1P51693 650 aa12.73□□□□□ -0.37
LINC01140-204ENST00000471417 DNAJC5GQ8N7S2 189 aa12.73□□□□□ -0.37
LINC01140-204ENST00000471417 TTLL6Q8N841 843 aa12.73□□□□□ -0.37
LINC01140-204ENST00000471417 A0A087WZG4 1122 aa12.72□□□□□ -0.37
LINC01140-204ENST00000471417 PRAMEF22A3QJZ6 481 aa12.72□□□□□ -0.37
LINC01140-204ENST00000471417 BTBD11A6QL63 1104 aa12.72□□□□□ -0.37
LINC01140-204ENST00000471417 H0YIN7 160 aa12.72□□□□□ -0.37
LINC01140-204ENST00000471417 IL6STP40189 918 aaPredicted RBP12.72□□□□□ -0.37
LINC01140-204ENST00000471417 HTRA3P83110 453 aa12.72□□□□□ -0.37
LINC01140-204ENST00000471417 IFFO2Q5TF58 517 aa12.72□□□□□ -0.37
LINC01140-204ENST00000471417 FMNL2Q96PY5 1086 aa12.72□□□□□ -0.37
LINC01140-204ENST00000471417 TEX13AQ9BXU3 409 aaPredicted RBP12.72□□□□□ -0.37
LINC01140-204ENST00000471417 USP16Q9Y5T5 823 aa12.72□□□□□ -0.37
LINC01140-204ENST00000471417 SBF1O95248 1867 aa12.72□□□□□ -0.37
LINC01140-204ENST00000471417 SIPA1L3O60292 1781 aaPredicted RBP12.71□□□□□ -0.37
LINC01140-204ENST00000471417 KDM2BQ8NHM5 1336 aa12.71□□□□□ -0.37
LINC01140-204ENST00000471417 NFKBIEO00221 500 aa12.71□□□□□ -0.37
LINC01140-204ENST00000471417 CAMTA2O94983 1202 aa12.71□□□□□ -0.37
LINC01140-204ENST00000471417 PPP2R1AP30153 589 aa12.71□□□□□ -0.37
LINC01140-204ENST00000471417 DCTN1Q14203 1278 aa12.71□□□□□ -0.37
LINC01140-204ENST00000471417 PRR5LQ6MZQ0 368 aa12.71□□□□□ -0.37
LINC01140-204ENST00000471417 MCM10Q7L590 875 aa12.71□□□□□ -0.37
LINC01140-204ENST00000471417 C16orf71Q8IYS4 520 aaPredicted RBP12.71□□□□□ -0.37
LINC01140-204ENST00000471417 RBM46Q8TBY0 533 aaKnown RBP12.71□□□□□ -0.37
LINC01140-204ENST00000471417 CFAP53Q96M91 514 aa12.71□□□□□ -0.37
LINC01140-204ENST00000471417 U2AF1L5P0DN76 240 aaPredicted RBP12.7□□□□□ -0.38
LINC01140-204ENST00000471417 LMNB1P20700 586 aa12.7□□□□□ -0.38
LINC01140-204ENST00000471417 U2AF1Q01081 240 aaKnown RBP eCLIP12.7□□□□□ -0.38
LINC01140-204ENST00000471417 ZNF622Q969S3 477 aaKnown RBP eCLIP12.7□□□□□ -0.38
LINC01140-204ENST00000471417 ZNF219Q9P2Y4 722 aaPredicted RBP12.7□□□□□ -0.38
LINC01140-204ENST00000471417 BRIP1Q9BX63 1249 aa12.69□□□□□ -0.38
LINC01140-204ENST00000471417 NUDCQ9Y266 331 aa12.69□□□□□ -0.38
LINC01140-204ENST00000471417 ANKRD31Q8N7Z5 1873 aa12.68□□□□□ -0.38
LINC01140-204ENST00000471417 C21orf2O43822 256 aa12.68□□□□□ -0.38
LINC01140-204ENST00000471417 FSTL1Q12841 308 aa12.68□□□□□ -0.38
LINC01140-204ENST00000471417 DZIP3Q86Y13 1208 aaKnown RBP12.68□□□□□ -0.38
LINC01140-204ENST00000471417 SETDB2Q96T68 719 aa12.68□□□□□ -0.38
LINC01140-204ENST00000471417 DLEC1Q9Y238 1755 aa12.68□□□□□ -0.38
LINC01140-204ENST00000471417 SCN7AQ01118 1682 aa12.67□□□□□ -0.38
LINC01140-204ENST00000471417 GLTPD2A6NH11 291 aa12.67□□□□□ -0.38
LINC01140-204ENST00000471417 PDE6BP35913 854 aa12.67□□□□□ -0.38
LINC01140-204ENST00000471417 RTF1Q92541 710 aaKnown RBP12.67□□□□□ -0.38
LINC01140-204ENST00000471417 NBPF26B4DH59 902 aa12.66□□□□□ -0.38
LINC01140-204ENST00000471417 SNRPA1P09661 255 aaKnown RBP12.66□□□□□ -0.38
LINC01140-204ENST00000471417 NBPF10Q6P3W6 841 aaKnown RBP12.66□□□□□ -0.38
LINC01140-204ENST00000471417 NPM2Q86SE8 214 aaKnown RBP12.66□□□□□ -0.38
LINC01140-204ENST00000471417 NBPF15Q8N660 670 aa12.66□□□□□ -0.38
LINC01140-204ENST00000471417 CNBD1Q8NA66 436 aa12.66□□□□□ -0.38
LINC01140-204ENST00000471417 MIS18AQ9NYP9 233 aa12.66□□□□□ -0.38
LINC01140-204ENST00000471417 COL11A2P13942 1736 aaPredicted RBP12.65□□□□□ -0.38
LINC01140-204ENST00000471417 ZC3H4Q9UPT8 1303 aaKnown RBP12.65□□□□□ -0.38
LINC01140-204ENST00000471417 POTECB2RU33 542 aa12.65□□□□□ -0.38
LINC01140-204ENST00000471417 VEGFAP15692 232 aaPredicted RBP12.65□□□□□ -0.38
LINC01140-204ENST00000471417 NPHP1O15259 732 aa12.64□□□□□ -0.39
LINC01140-204ENST00000471417 SRGNP10124 158 aa12.64□□□□□ -0.39
LINC01140-204ENST00000471417 SMC1BQ8NDV3 1235 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms