RNA–Protein interactions for RNA: ENST00000471161.1

TMEM139-206, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 1,724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-206ENST00000471161 USP16Q9Y5T5 823 aa16.49■□□□□ 0.23
TMEM139-206ENST00000471161 DDX21Q9NR30 783 aaKnown RBP eCLIP16.48■□□□□ 0.23
TMEM139-206ENST00000471161 PDZRN3Q9UPQ7 1066 aa16.48■□□□□ 0.23
TMEM139-206ENST00000471161 BCL9LQ86UU0 1499 aa16.48■□□□□ 0.23
TMEM139-206ENST00000471161 HSPA1LP34931 641 aa16.48■□□□□ 0.23
TMEM139-206ENST00000471161 RGS3P49796 1198 aa16.48■□□□□ 0.23
TMEM139-206ENST00000471161 UNC5CLQ8IV45 518 aa16.48■□□□□ 0.23
TMEM139-206ENST00000471161 SPATA31A6Q5VVP1 1343 aa16.47■□□□□ 0.23
TMEM139-206ENST00000471161 ADCY9O60503 1353 aa16.47■□□□□ 0.23
TMEM139-206ENST00000471161 PI4KAP2A4QPH2 592 aa16.47■□□□□ 0.23
TMEM139-206ENST00000471161 SMC5Q8IY18 1101 aa16.47■□□□□ 0.23
TMEM139-206ENST00000471161 PI4KAP1Q8N8J0 262 aa16.47■□□□□ 0.23
TMEM139-206ENST00000471161 NGLY1Q96IV0 654 aa16.47■□□□□ 0.23
TMEM139-206ENST00000471161 CDCA7Q9BWT1 371 aaPredicted RBP16.47■□□□□ 0.23
TMEM139-206ENST00000471161 CCDC9Q9Y3X0 531 aaKnown RBP16.47■□□□□ 0.23
TMEM139-206ENST00000471161 ATP10DQ9P241 1426 aa16.47■□□□□ 0.23
TMEM139-206ENST00000471161 HYPKQ9NX55 129 aa16.46■□□□□ 0.23
TMEM139-206ENST00000471161 TMOD3Q9NYL9 352 aa16.46■□□□□ 0.23
TMEM139-206ENST00000471161 DNAAF4Q8WXU2 420 aa16.45■□□□□ 0.22
TMEM139-206ENST00000471161 PIGBQ92521 554 aa16.45■□□□□ 0.22
TMEM139-206ENST00000471161 DOT1LQ8TEK3 1739 aa16.45■□□□□ 0.22
TMEM139-206ENST00000471161 DDB1Q16531 1140 aa16.45■□□□□ 0.22
TMEM139-206ENST00000471161 BARGINQ6ZT62 677 aa16.45■□□□□ 0.22
TMEM139-206ENST00000471161 FNBP4Q8N3X1 1017 aaPredicted RBP16.45■□□□□ 0.22
TMEM139-206ENST00000471161 RBM19Q9Y4C8 960 aaKnown RBP16.45■□□□□ 0.22
TMEM139-206ENST00000471161 PTCD1O75127 700 aaKnown RBP16.44■□□□□ 0.22
TMEM139-206ENST00000471161 MYL6BP14649 208 aa16.44■□□□□ 0.22
TMEM139-206ENST00000471161 PIP4K2AP48426 406 aaPredicted RBP16.44■□□□□ 0.22
TMEM139-206ENST00000471161 LRP10Q7Z4F1 713 aa16.44■□□□□ 0.22
TMEM139-206ENST00000471161 ASAP1Q9ULH1 1129 aa16.44■□□□□ 0.22
TMEM139-206ENST00000471161 VPS72Q15906 364 aa16.43■□□□□ 0.22
TMEM139-206ENST00000471161 BEND3Q5T5X7 828 aa16.43■□□□□ 0.22
TMEM139-206ENST00000471161 CEP85Q6P2H3 762 aa16.43■□□□□ 0.22
TMEM139-206ENST00000471161 ANKRD44Q8N8A2 993 aa16.43■□□□□ 0.22
TMEM139-206ENST00000471161 AIMP1Q12904 312 aaKnown RBP16.42■□□□□ 0.22
TMEM139-206ENST00000471161 KSR2Q6VAB6 950 aa16.42■□□□□ 0.22
TMEM139-206ENST00000471161 SRCIN1Q9C0H9 1055 aa16.42■□□□□ 0.22
TMEM139-206ENST00000471161 USP44Q9H0E7 712 aa16.42■□□□□ 0.22
TMEM139-206ENST00000471161 ATG3Q9NT62 314 aa16.42■□□□□ 0.22
TMEM139-206ENST00000471161 MAP3K2Q9Y2U5 619 aa16.42■□□□□ 0.22
TMEM139-206ENST00000471161 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.42■□□□□ 0.22
TMEM139-206ENST00000471161 BCL9O00512 1426 aa16.42■□□□□ 0.22
TMEM139-206ENST00000471161 MARCH10Q8NA82 808 aaPredicted RBP16.42■□□□□ 0.22
TMEM139-206ENST00000471161 FAM98CQ17RN3 349 aaKnown RBP16.41■□□□□ 0.22
TMEM139-206ENST00000471161 RPAP2Q8IXW5 612 aaPredicted RBP16.41■□□□□ 0.22
TMEM139-206ENST00000471161 XAGE3Q8WTP9 111 aa16.41■□□□□ 0.22
TMEM139-206ENST00000471161 GNAI3P08754 354 aa16.4■□□□□ 0.22
TMEM139-206ENST00000471161 COPS6Q7L5N1 327 aa16.4■□□□□ 0.22
TMEM139-206ENST00000471161 USP21Q9UK80 565 aa16.4■□□□□ 0.22
TMEM139-206ENST00000471161 NBPF26B4DH59 902 aa16.39■□□□□ 0.21
TMEM139-206ENST00000471161 GNAI2P04899 355 aa16.39■□□□□ 0.21
TMEM139-206ENST00000471161 PDE4AP27815 886 aa16.39■□□□□ 0.21
TMEM139-206ENST00000471161 PRIM1P49642 420 aaKnown RBP16.39■□□□□ 0.21
TMEM139-206ENST00000471161 NBPF14Q5TI25 921 aa16.39■□□□□ 0.21
TMEM139-206ENST00000471161 NBPF10Q6P3W6 841 aaKnown RBP16.39■□□□□ 0.21
TMEM139-206ENST00000471161 NBPF15Q8N660 670 aa16.39■□□□□ 0.21
TMEM139-206ENST00000471161 GCC1Q96CN9 775 aa16.39■□□□□ 0.21
TMEM139-206ENST00000471161 NUCB1Q02818 461 aa16.39■□□□□ 0.21
TMEM139-206ENST00000471161 SYTL4Q96C24 671 aaPredicted RBP16.39■□□□□ 0.21
TMEM139-206ENST00000471161 DDX58O95786 925 aaKnown RBP16.38■□□□□ 0.21
TMEM139-206ENST00000471161 A1BGP04217 495 aa16.38■□□□□ 0.21
TMEM139-206ENST00000471161 LRRFIP2Q9Y608 721 aaKnown RBP16.38■□□□□ 0.21
TMEM139-206ENST00000471161 ARFGEF2Q9Y6D5 1785 aa16.37■□□□□ 0.21
TMEM139-206ENST00000471161 ERBB4Q15303 1308 aa16.37■□□□□ 0.21
TMEM139-206ENST00000471161 ILDR2Q71H61 639 aa16.37■□□□□ 0.21
TMEM139-206ENST00000471161 BACH2Q9BYV9 841 aa16.37■□□□□ 0.21
TMEM139-206ENST00000471161 DCTPP1Q9H773 170 aa16.37■□□□□ 0.21
TMEM139-206ENST00000471161 NBPF7P0C2Y1 421 aaPredicted RBP16.36■□□□□ 0.21
TMEM139-206ENST00000471161 UBTFL1P0CB47 393 aaPredicted RBP16.36■□□□□ 0.21
TMEM139-206ENST00000471161 CWF19L2Q2TBE0 894 aaKnown RBP16.36■□□□□ 0.21
TMEM139-206ENST00000471161 MEX3CQ5U5Q3 659 aaKnown RBP16.36■□□□□ 0.21
TMEM139-206ENST00000471161 RIC3Q7Z5B4 369 aa16.36■□□□□ 0.21
TMEM139-206ENST00000471161 ACSBG1Q96GR2 724 aa16.36■□□□□ 0.21
TMEM139-206ENST00000471161 SLC4A9Q96Q91 983 aa16.36■□□□□ 0.21
TMEM139-206ENST00000471161 RBM42Q9BTD8 480 aaKnown RBP16.36■□□□□ 0.21
TMEM139-206ENST00000471161 LNPKQ9C0E8 428 aa16.36■□□□□ 0.21
TMEM139-206ENST00000471161 ALDH1L1O75891 902 aa16.36■□□□□ 0.21
TMEM139-206ENST00000471161 ANKRD45Q5TZF3 282 aa16.36■□□□□ 0.21
TMEM139-206ENST00000471161 CHD1LQ86WJ1 897 aa16.36■□□□□ 0.21
TMEM139-206ENST00000471161 DNAJC10Q8IXB1 793 aa16.36■□□□□ 0.21
TMEM139-206ENST00000471161 ANKRD13DQ6ZTN6 518 aa16.35■□□□□ 0.21
TMEM139-206ENST00000471161 VSIG10Q8N0Z9 540 aa16.35■□□□□ 0.21
TMEM139-206ENST00000471161 LINS1Q8NG48 757 aa16.35■□□□□ 0.21
TMEM139-206ENST00000471161 AFF2P51816 1311 aa16.34■□□□□ 0.21
TMEM139-206ENST00000471161 THSD7AQ9UPZ6 1657 aa16.34■□□□□ 0.21
TMEM139-206ENST00000471161 PNMA6EA0A0J9YXQ4 647 aa16.34■□□□□ 0.21
TMEM139-206ENST00000471161 IGKV5-2P06315 115 aa16.34■□□□□ 0.21
TMEM139-206ENST00000471161 ATP8B2P98198 1209 aa16.34■□□□□ 0.21
TMEM139-206ENST00000471161 TJP1Q07157 1748 aa16.34■□□□□ 0.21
TMEM139-206ENST00000471161 NUP188Q5SRE5 1749 aa16.34■□□□□ 0.21
TMEM139-206ENST00000471161 AFDNP55196 1824 aaKnown RBP16.34■□□□□ 0.21
TMEM139-206ENST00000471161 SOCS7O14512 581 aa16.33■□□□□ 0.21
TMEM139-206ENST00000471161 C8orf34Q49A92 452 aa16.33■□□□□ 0.21
TMEM139-206ENST00000471161 METTL22Q9BUU2 404 aaPredicted RBP16.33■□□□□ 0.21
TMEM139-206ENST00000471161 A0A0G2JS52 829 aa16.33■□□□□ 0.2
TMEM139-206ENST00000471161 TTLL7Q6ZT98 887 aa16.33■□□□□ 0.2
TMEM139-206ENST00000471161 MYD88Q99836 296 aa16.33■□□□□ 0.2
TMEM139-206ENST00000471161 HMMRO75330 724 aa16.32■□□□□ 0.2
TMEM139-206ENST00000471161 FAM161AQ3B820 660 aa16.32■□□□□ 0.2
TMEM139-206ENST00000471161 PLBD2Q8NHP8 589 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms