RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 ARHGEF10O15013 1369 aa13.6□□□□□ -0.23
SRGAP3-204ENST00000470951 RPAP1Q9BWH6 1393 aaPredicted RBP13.6□□□□□ -0.23
SRGAP3-204ENST00000470951 ADCY5O95622 1261 aa13.59□□□□□ -0.23
SRGAP3-204ENST00000470951 CHMLP26374 656 aa13.59□□□□□ -0.23
SRGAP3-204ENST00000470951 DIAPH3Q9NSV4 1193 aa13.59□□□□□ -0.23
SRGAP3-204ENST00000470951 STAP2Q9UGK3 403 aa13.59□□□□□ -0.23
SRGAP3-204ENST00000470951 KCNG1Q9UIX4 513 aa13.59□□□□□ -0.23
SRGAP3-204ENST00000470951 CACNA1FO60840 1977 aa13.59□□□□□ -0.23
SRGAP3-204ENST00000470951 FBLN1P23142 703 aa13.59□□□□□ -0.23
SRGAP3-204ENST00000470951 VASPP50552 380 aaPredicted RBP13.59□□□□□ -0.23
SRGAP3-204ENST00000470951 UBE2HP62256 183 aa13.59□□□□□ -0.23
SRGAP3-204ENST00000470951 CNPY4Q8N129 248 aa13.59□□□□□ -0.23
SRGAP3-204ENST00000470951 ZNF710Q8N1W2 664 aa13.59□□□□□ -0.23
SRGAP3-204ENST00000470951 LRRCC1Q9C099 1032 aa13.59□□□□□ -0.23
SRGAP3-204ENST00000470951 USP25Q9UHP3 1055 aa13.59□□□□□ -0.23
SRGAP3-204ENST00000470951 ATP6V1DQ9Y5K8 247 aa13.59□□□□□ -0.23
SRGAP3-204ENST00000470951 GADD45BO75293 160 aaPredicted RBP13.58□□□□□ -0.23
SRGAP3-204ENST00000470951 COG3Q96JB2 828 aa13.58□□□□□ -0.23
SRGAP3-204ENST00000470951 ANO2Q9NQ90 1003 aa13.58□□□□□ -0.23
SRGAP3-204ENST00000470951 AKAP12Q02952 1782 aa13.58□□□□□ -0.24
SRGAP3-204ENST00000470951 KDM4AO75164 1064 aa13.58□□□□□ -0.24
SRGAP3-204ENST00000470951 GNAI2P04899 355 aa13.58□□□□□ -0.24
SRGAP3-204ENST00000470951 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.58□□□□□ -0.24
SRGAP3-204ENST00000470951 ZNF592Q92610 1267 aa13.58□□□□□ -0.24
SRGAP3-204ENST00000470951 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
SRGAP3-204ENST00000470951 PALD1Q9ULE6 856 aa13.58□□□□□ -0.24
SRGAP3-204ENST00000470951 N4BP2Q86UW6 1770 aaPredicted RBP13.57□□□□□ -0.24
SRGAP3-204ENST00000470951 CHAF1AQ13111 956 aaPredicted RBP13.57□□□□□ -0.24
SRGAP3-204ENST00000470951 DCTN1Q14203 1278 aa13.57□□□□□ -0.24
SRGAP3-204ENST00000470951 HSPA2P54652 639 aa13.57□□□□□ -0.24
SRGAP3-204ENST00000470951 SETD1AO15047 1707 aaKnown RBP13.57□□□□□ -0.24
SRGAP3-204ENST00000470951 ITSN1Q15811 1721 aa13.56□□□□□ -0.24
SRGAP3-204ENST00000470951 HSPA4P34932 840 aa13.56□□□□□ -0.24
SRGAP3-204ENST00000470951 PSEN1P49768 467 aa13.56□□□□□ -0.24
SRGAP3-204ENST00000470951 FAM177A1Q8N128 213 aaPredicted RBP13.56□□□□□ -0.24
SRGAP3-204ENST00000470951 GOLGA6L6A8MZA4 724 aa13.56□□□□□ -0.24
SRGAP3-204ENST00000470951 SLC4A2P04920 1241 aa13.56□□□□□ -0.24
SRGAP3-204ENST00000470951 ZSCAN22P10073 491 aaPredicted RBP13.56□□□□□ -0.24
SRGAP3-204ENST00000470951 KRT24Q2M2I5 525 aa13.56□□□□□ -0.24
SRGAP3-204ENST00000470951 NME9Q86XW9 330 aa13.56□□□□□ -0.24
SRGAP3-204ENST00000470951 KIAA1524Q8TCG1 905 aa13.56□□□□□ -0.24
SRGAP3-204ENST00000470951 TTC12Q9H892 705 aaPredicted RBP13.56□□□□□ -0.24
SRGAP3-204ENST00000470951 GNAI3P08754 354 aa13.55□□□□□ -0.24
SRGAP3-204ENST00000470951 DNAJC2Q99543 621 aaKnown RBP13.55□□□□□ -0.24
SRGAP3-204ENST00000470951 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.55□□□□□ -0.24
SRGAP3-204ENST00000470951 HCLS1P14317 486 aaPredicted RBP13.55□□□□□ -0.24
SRGAP3-204ENST00000470951 FUCA2Q9BTY2 467 aa13.55□□□□□ -0.24
SRGAP3-204ENST00000470951 GDPD2Q9HCC8 539 aa13.55□□□□□ -0.24
SRGAP3-204ENST00000470951 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.55□□□□□ -0.24
SRGAP3-204ENST00000470951 CEP170BQ9Y4F5 1589 aaPredicted RBP13.54□□□□□ -0.24
SRGAP3-204ENST00000470951 CRB1P82279 1406 aa13.54□□□□□ -0.24
SRGAP3-204ENST00000470951 AXDND1Q5T1B0 1012 aaPredicted RBP13.54□□□□□ -0.24
SRGAP3-204ENST00000470951 RGPD1P0DJD0 1748 aa13.54□□□□□ -0.24
SRGAP3-204ENST00000470951 ATP8B2P98198 1209 aa13.53□□□□□ -0.24
SRGAP3-204ENST00000470951 YY1AP1Q9H869 796 aa13.53□□□□□ -0.24
SRGAP3-204ENST00000470951 BCL2L12Q9HB09 334 aa13.53□□□□□ -0.24
SRGAP3-204ENST00000470951 A2ML1A8K2U0 1454 aa13.53□□□□□ -0.24
SRGAP3-204ENST00000470951 TRIM6-TRIM34B2RNG4 842 aa13.53□□□□□ -0.24
SRGAP3-204ENST00000470951 STX6O43752 255 aa13.53□□□□□ -0.24
SRGAP3-204ENST00000470951 PDCL2Q8N4E4 241 aa13.53□□□□□ -0.24
SRGAP3-204ENST00000470951 ANKRD7Q92527 254 aa13.53□□□□□ -0.24
SRGAP3-204ENST00000470951 RILPL2Q969X0 211 aa13.53□□□□□ -0.24
SRGAP3-204ENST00000470951 UPF3BQ9BZI7 483 aaKnown RBP13.53□□□□□ -0.24
SRGAP3-204ENST00000470951 EXOC6BQ9Y2D4 811 aa13.53□□□□□ -0.24
SRGAP3-204ENST00000470951 CPS1P31327 1500 aa13.53□□□□□ -0.24
SRGAP3-204ENST00000470951 LMTK3Q96Q04 1460 aa13.52□□□□□ -0.24
SRGAP3-204ENST00000470951 WASLO00401 505 aaPredicted RBP13.52□□□□□ -0.24
SRGAP3-204ENST00000470951 CTIFO43310 598 aaKnown RBP13.52□□□□□ -0.24
SRGAP3-204ENST00000470951 SYCP1Q15431 976 aa13.52□□□□□ -0.24
SRGAP3-204ENST00000470951 NOL8Q76FK4 1167 aaKnown RBP13.52□□□□□ -0.24
SRGAP3-204ENST00000470951 ZNF622Q969S3 477 aaKnown RBP eCLIP13.52□□□□□ -0.24
SRGAP3-204ENST00000470951 HDAC5Q9UQL6 1122 aa13.52□□□□□ -0.24
SRGAP3-204ENST00000470951 CNPY2Q9Y2B0 182 aa13.52□□□□□ -0.24
SRGAP3-204ENST00000470951 UBR1Q8IWV7 1749 aa13.52□□□□□ -0.24
SRGAP3-204ENST00000470951 RAD50Q92878 1312 aa13.52□□□□□ -0.25
SRGAP3-204ENST00000470951 F13A1P00488 732 aa13.52□□□□□ -0.25
SRGAP3-204ENST00000470951 IRX5P78411 483 aaPredicted RBP13.52□□□□□ -0.25
SRGAP3-204ENST00000470951 TICAM2Q86XR7 235 aa13.52□□□□□ -0.25
SRGAP3-204ENST00000470951 XRN1Q8IZH2 1706 aaKnown RBP13.52□□□□□ -0.25
SRGAP3-204ENST00000470951 FEZ1Q99689 392 aa13.52□□□□□ -0.25
SRGAP3-204ENST00000470951 RRS1Q15050 365 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-204ENST00000470951 SULT6B1Q6IMI4 303 aa13.51□□□□□ -0.25
SRGAP3-204ENST00000470951 PIAS4Q8N2W9 510 aaPredicted RBP13.51□□□□□ -0.25
SRGAP3-204ENST00000470951 TTC14Q96N46 770 aa13.51□□□□□ -0.25
SRGAP3-204ENST00000470951 LIMCH1Q9UPQ0 1083 aa13.51□□□□□ -0.25
SRGAP3-204ENST00000470951 EIF4A2Q14240 407 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-204ENST00000470951 TMED8Q6PL24 325 aaPredicted RBP13.51□□□□□ -0.25
SRGAP3-204ENST00000470951 SLC4A10Q6U841 1118 aa13.51□□□□□ -0.25
SRGAP3-204ENST00000470951 PXDNLA1KZ92 1463 aa13.51□□□□□ -0.25
SRGAP3-204ENST00000470951 SYT1P21579 422 aa13.5□□□□□ -0.25
SRGAP3-204ENST00000470951 MCM10Q7L590 875 aa13.5□□□□□ -0.25
SRGAP3-204ENST00000470951 AEBP1Q8IUX7 1158 aa13.5□□□□□ -0.25
SRGAP3-204ENST00000470951 ZNF142P52746 1687 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-204ENST00000470951 FAM208AQ9UK61 1670 aaKnown RBP13.5□□□□□ -0.25
SRGAP3-204ENST00000470951 SOS1Q07889 1333 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-204ENST00000470951 CCDC192P0DO97 292 aa13.5□□□□□ -0.25
SRGAP3-204ENST00000470951 CBX1P83916 185 aa13.5□□□□□ -0.25
SRGAP3-204ENST00000470951 GRIPAP1Q4V328 841 aa13.5□□□□□ -0.25
SRGAP3-204ENST00000470951 WAPLQ7Z5K2 1190 aa13.5□□□□□ -0.25
SRGAP3-204ENST00000470951 THEMISQ8N1K5 641 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms