RNA–Protein interactions for RNA: ENST00000470835.1

LMNA-212, Transcript of lamin A/C, humanhuman

TSL 3

Gene LMNA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-212ENST00000470835 ZBTB1Q9Y2K1 713 aa23.28■■□□□ 1.32
LMNA-212ENST00000470835 POLRMTO00411 1230 aaKnown RBP23.27■■□□□ 1.32
LMNA-212ENST00000470835 TTC5Q8N0Z6 440 aa23.27■■□□□ 1.32
LMNA-212ENST00000470835 SCN7AQ01118 1682 aa23.26■■□□□ 1.31
LMNA-212ENST00000470835 CEP350Q5VT06 3117 aa23.26■■□□□ 1.31
LMNA-212ENST00000470835 KCNA3P22001 575 aa23.26■■□□□ 1.31
LMNA-212ENST00000470835 ARHGAP27Q6ZUM4 889 aa23.26■■□□□ 1.31
LMNA-212ENST00000470835 GNAT3A8MTJ3 354 aa23.25■■□□□ 1.31
LMNA-212ENST00000470835 TM4SF1P30408 202 aa23.25■■□□□ 1.31
LMNA-212ENST00000470835 TEFQ10587 303 aa23.25■■□□□ 1.31
LMNA-212ENST00000470835 PIM2Q9P1W9 311 aa23.25■■□□□ 1.31
LMNA-212ENST00000470835 CFAP53Q96M91 514 aa23.24■■□□□ 1.31
LMNA-212ENST00000470835 NARFQ9UHQ1 456 aa23.24■■□□□ 1.31
LMNA-212ENST00000470835 SBF1O95248 1867 aa23.24■■□□□ 1.31
LMNA-212ENST00000470835 IL17REQ8NFR9 667 aa23.23■■□□□ 1.31
LMNA-212ENST00000470835 CANXP27824 592 aaKnown RBP23.22■■□□□ 1.31
LMNA-212ENST00000470835 CHRNA5P30532 468 aa23.22■■□□□ 1.31
LMNA-212ENST00000470835 NFIXQ14938 502 aa23.22■■□□□ 1.31
LMNA-212ENST00000470835 STARD3NLO95772 234 aa23.21■■□□□ 1.31
LMNA-212ENST00000470835 PRKAR2BP31323 418 aa23.21■■□□□ 1.31
LMNA-212ENST00000470835 DALRD3Q5D0E6 543 aaKnown RBP23.21■■□□□ 1.31
LMNA-212ENST00000470835 ZNF790Q6PG37 636 aa23.21■■□□□ 1.31
LMNA-212ENST00000470835 ZNF496Q96IT1 587 aaPredicted RBP23.21■■□□□ 1.31
LMNA-212ENST00000470835 HEG1Q9ULI3 1381 aa23.21■■□□□ 1.31
LMNA-212ENST00000470835 CEMIPQ8WUJ3 1361 aa23.2■■□□□ 1.3
LMNA-212ENST00000470835 KIF3CO14782 793 aa23.2■■□□□ 1.3
LMNA-212ENST00000470835 RSPH6AQ9H0K4 717 aa23.2■■□□□ 1.3
LMNA-212ENST00000470835 PHACTR3Q96KR7 559 aa23.19■■□□□ 1.3
LMNA-212ENST00000470835 BCL2L12Q9HB09 334 aa23.19■■□□□ 1.3
LMNA-212ENST00000470835 ANKRD31Q8N7Z5 1873 aa23.19■■□□□ 1.3
LMNA-212ENST00000470835 BCORQ6W2J9 1755 aa23.19■■□□□ 1.3
LMNA-212ENST00000470835 EIF5P55010 431 aaKnown RBP23.17■■□□□ 1.3
LMNA-212ENST00000470835 NUDCQ9Y266 331 aa23.17■■□□□ 1.3
LMNA-212ENST00000470835 SERPINB2P05120 415 aa23.16■■□□□ 1.3
LMNA-212ENST00000470835 PPP2R1AP30153 589 aa23.16■■□□□ 1.3
LMNA-212ENST00000470835 C9orf131Q5VYM1 1079 aa23.16■■□□□ 1.3
LMNA-212ENST00000470835 CCDC88AQ3V6T2 1871 aa23.15■■□□□ 1.3
LMNA-212ENST00000470835 A0A087WZG4 1122 aa23.15■■□□□ 1.3
LMNA-212ENST00000470835 U2AF1L5P0DN76 240 aaPredicted RBP23.15■■□□□ 1.3
LMNA-212ENST00000470835 HSPA6P17066 643 aa23.15■■□□□ 1.3
LMNA-212ENST00000470835 U2AF1Q01081 240 aaKnown RBP eCLIP23.15■■□□□ 1.3
LMNA-212ENST00000470835 FMNL2Q96PY5 1086 aa23.15■■□□□ 1.3
LMNA-212ENST00000470835 TEX13AQ9BXU3 409 aaPredicted RBP23.15■■□□□ 1.3
LMNA-212ENST00000470835 ZNF330Q9Y3S2 320 aaPredicted RBP23.15■■□□□ 1.3
LMNA-212ENST00000470835 COL11A2P13942 1736 aaPredicted RBP23.15■■□□□ 1.3
LMNA-212ENST00000470835 CARMIL3Q8ND23 1372 aa23.14■■□□□ 1.3
LMNA-212ENST00000470835 DLG5Q8TDM6 1919 aa23.14■■□□□ 1.3
LMNA-212ENST00000470835 TNRC6CQ9HCJ0 1690 aaKnown RBP23.13■■□□□ 1.29
LMNA-212ENST00000470835 BTBD11A6QL63 1104 aa23.13■■□□□ 1.29
LMNA-212ENST00000470835 BICDL1Q6ZP65 573 aa23.13■■□□□ 1.29
LMNA-212ENST00000470835 CACNA1SQ13698 1873 aa23.13■■□□□ 1.29
LMNA-212ENST00000470835 TIAM2Q8IVF5 1701 aa23.12■■□□□ 1.29
LMNA-212ENST00000470835 NMRK2Q9NPI5 230 aa23.12■■□□□ 1.29
LMNA-212ENST00000470835 RNF181Q9P0P0 153 aa23.12■■□□□ 1.29
LMNA-212ENST00000470835 KCNQ3O43525 872 aa23.11■■□□□ 1.29
LMNA-212ENST00000470835 IL6STP40189 918 aaPredicted RBP23.1■■□□□ 1.29
LMNA-212ENST00000470835 TBC1D9BQ66K14 1250 aa23.1■■□□□ 1.29
LMNA-212ENST00000470835 TBC1D2BQ9UPU7 963 aa23.1■■□□□ 1.29
LMNA-212ENST00000470835 LAMB4A4D0S4 1761 aa23.09■■□□□ 1.29
LMNA-212ENST00000470835 A1BGP04217 495 aa23.09■■□□□ 1.29
LMNA-212ENST00000470835 C2CD5Q86YS7 1000 aa23.09■■□□□ 1.29
LMNA-212ENST00000470835 RTF1Q92541 710 aaKnown RBP23.09■■□□□ 1.29
LMNA-212ENST00000470835 TOMM70O94826 608 aa23.08■■□□□ 1.29
LMNA-212ENST00000470835 MCM10Q7L590 875 aa23.08■■□□□ 1.29
LMNA-212ENST00000470835 NPM2Q86SE8 214 aaKnown RBP23.08■■□□□ 1.29
LMNA-212ENST00000470835 RASSF7Q02833 373 aa23.07■■□□□ 1.28
LMNA-212ENST00000470835 H0YIN7 160 aa23.06■■□□□ 1.28
LMNA-212ENST00000470835 TTLL6Q8N841 843 aa23.06■■□□□ 1.28
LMNA-212ENST00000470835 ARFGEF2Q9Y6D5 1785 aa23.06■■□□□ 1.28
LMNA-212ENST00000470835 KDM2BQ8NHM5 1336 aa23.06■■□□□ 1.28
LMNA-212ENST00000470835 KDM3BQ7LBC6 1761 aa23.05■■□□□ 1.28
LMNA-212ENST00000470835 FER1L6Q2WGJ9 1857 aa23.05■■□□□ 1.28
LMNA-212ENST00000470835 CAMTA2O94983 1202 aa23.04■■□□□ 1.28
LMNA-212ENST00000470835 DCTN1Q14203 1278 aa23.04■■□□□ 1.28
LMNA-212ENST00000470835 PRR5LQ6MZQ0 368 aa23.04■■□□□ 1.28
LMNA-212ENST00000470835 USP16Q9Y5T5 823 aa23.04■■□□□ 1.28
LMNA-212ENST00000470835 WDR90Q96KV7 1748 aa23.04■■□□□ 1.28
LMNA-212ENST00000470835 DICER1Q9UPY3 1922 aaKnown RBP23.04■■□□□ 1.28
LMNA-212ENST00000470835 PRAMEF22A3QJZ6 481 aa23.03■■□□□ 1.28
LMNA-212ENST00000470835 PIP4K2AP48426 406 aaPredicted RBP23.03■■□□□ 1.28
LMNA-212ENST00000470835 DZIP3Q86Y13 1208 aaKnown RBP23.03■■□□□ 1.28
LMNA-212ENST00000470835 C16orf71Q8IYS4 520 aaPredicted RBP23.02■■□□□ 1.28
LMNA-212ENST00000470835 CCDC24Q8N4L8 307 aa23.02■■□□□ 1.28
LMNA-212ENST00000470835 BRIP1Q9BX63 1249 aa23.02■■□□□ 1.28
LMNA-212ENST00000470835 ZC3H4Q9UPT8 1303 aaKnown RBP23.02■■□□□ 1.28
LMNA-212ENST00000470835 HTATSF1O43719 755 aaKnown RBP23.01■■□□□ 1.27
LMNA-212ENST00000470835 SNRPA1P09661 255 aaKnown RBP23.01■■□□□ 1.27
LMNA-212ENST00000470835 LMNB1P20700 586 aa23.01■■□□□ 1.27
LMNA-212ENST00000470835 PDE6BP35913 854 aa23.01■■□□□ 1.27
LMNA-212ENST00000470835 CNBD1Q8NA66 436 aa23.01■■□□□ 1.27
LMNA-212ENST00000470835 ZNF622Q969S3 477 aaKnown RBP eCLIP23.01■■□□□ 1.27
LMNA-212ENST00000470835 SETDB2Q96T68 719 aa23.01■■□□□ 1.27
LMNA-212ENST00000470835 SLX4Q8IY92 1834 aa23.01■■□□□ 1.27
LMNA-212ENST00000470835 NPHP1O15259 732 aa23■■□□□ 1.27
LMNA-212ENST00000470835 APLP1P51693 650 aa23■■□□□ 1.27
LMNA-212ENST00000470835 RBM46Q8TBY0 533 aaKnown RBP23■■□□□ 1.27
LMNA-212ENST00000470835 PDZRN3Q9UPQ7 1066 aa23■■□□□ 1.27
LMNA-212ENST00000470835 PRELPP51888 382 aa22.99■■□□□ 1.27
LMNA-212ENST00000470835 NFKBIEO00221 500 aa22.98■■□□□ 1.27
LMNA-212ENST00000470835 NEFMP07197 916 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms