RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 SERTM1A2A2V5 107 aa6.85□□□□□ -1.31
PRPF3-204ENST00000470824 FAM187AA6NFU0 413 aa6.85□□□□□ -1.31
PRPF3-204ENST00000470824 GTF2E1P29083 439 aaPredicted RBP6.85□□□□□ -1.31
PRPF3-204ENST00000470824 TEAD4Q15561 434 aa6.85□□□□□ -1.31
PRPF3-204ENST00000470824 ZSCAN10Q96SZ4 725 aaPredicted RBP6.85□□□□□ -1.31
PRPF3-204ENST00000470824 FHDC1Q9C0D6 1143 aaPredicted RBP6.85□□□□□ -1.31
PRPF3-204ENST00000470824 ZNF395Q9H8N7 513 aaPredicted RBP6.85□□□□□ -1.31
PRPF3-204ENST00000470824 CABP1Q9NZU7 370 aa6.85□□□□□ -1.31
PRPF3-204ENST00000470824 DCTN4Q9UJW0 460 aa6.85□□□□□ -1.31
PRPF3-204ENST00000470824 NPR3P17342 541 aa6.84□□□□□ -1.31
PRPF3-204ENST00000470824 MAPK1P28482 360 aa6.84□□□□□ -1.31
PRPF3-204ENST00000470824 NOS2P35228 1153 aa6.84□□□□□ -1.31
PRPF3-204ENST00000470824 PRR20EP86478 221 aa6.84□□□□□ -1.31
PRPF3-204ENST00000470824 PRR20CP86479 221 aa6.84□□□□□ -1.31
PRPF3-204ENST00000470824 PRR20DP86480 221 aa6.84□□□□□ -1.31
PRPF3-204ENST00000470824 PRR20BP86481 221 aa6.84□□□□□ -1.31
PRPF3-204ENST00000470824 PRR20AP86496 221 aa6.84□□□□□ -1.31
PRPF3-204ENST00000470824 ARHGAP4P98171 946 aa6.84□□□□□ -1.31
PRPF3-204ENST00000470824 ECM1Q16610 540 aa6.84□□□□□ -1.31
PRPF3-204ENST00000470824 POTEAQ6S8J7 498 aa6.84□□□□□ -1.31
PRPF3-204ENST00000470824 PPARGC1BQ86YN6 1023 aaKnown RBP6.84□□□□□ -1.31
PRPF3-204ENST00000470824 ZNF428Q96B54 188 aa6.84□□□□□ -1.31
PRPF3-204ENST00000470824 SAP130Q9H0E3 1048 aa6.84□□□□□ -1.31
PRPF3-204ENST00000470824 ZNF232Q9UNY5 417 aa6.84□□□□□ -1.31
PRPF3-204ENST00000470824 USP3Q9Y6I4 520 aa6.84□□□□□ -1.31
PRPF3-204ENST00000470824 ANKRD33BA6NCL7 494 aa6.83□□□□□ -1.32
PRPF3-204ENST00000470824 E9PSI1 815 aa6.83□□□□□ -1.32
PRPF3-204ENST00000470824 EML1O00423 815 aa6.83□□□□□ -1.32
PRPF3-204ENST00000470824 GPC1P35052 558 aa6.83□□□□□ -1.32
PRPF3-204ENST00000470824 COX20Q5RI15 118 aa6.83□□□□□ -1.32
PRPF3-204ENST00000470824 TMEM214Q6NUQ4 689 aaKnown RBP6.83□□□□□ -1.32
PRPF3-204ENST00000470824 ZSCAN29Q8IWY8 852 aaPredicted RBP6.83□□□□□ -1.32
PRPF3-204ENST00000470824 MEIOBQ8N635 442 aa6.83□□□□□ -1.32
PRPF3-204ENST00000470824 L3MBTL2Q969R5 705 aa6.83□□□□□ -1.32
PRPF3-204ENST00000470824 MYO19Q96H55 970 aa6.83□□□□□ -1.32
PRPF3-204ENST00000470824 TSEN34Q9BSV6 310 aaKnown RBP6.83□□□□□ -1.32
PRPF3-204ENST00000470824 NIFKQ9BYG3 293 aaKnown RBP6.83□□□□□ -1.32
PRPF3-204ENST00000470824 STIM2Q9P246 746 aa6.83□□□□□ -1.32
PRPF3-204ENST00000470824 RBM47A0AV96 593 aaKnown RBP6.82□□□□□ -1.32
PRPF3-204ENST00000470824 DGAT1O75907 488 aa6.82□□□□□ -1.32
PRPF3-204ENST00000470824 MPSTP25325 297 aa6.82□□□□□ -1.32
PRPF3-204ENST00000470824 HIRAP54198 1017 aaPredicted RBP6.82□□□□□ -1.32
PRPF3-204ENST00000470824 SLC27A3Q5K4L6 730 aa6.82□□□□□ -1.32
PRPF3-204ENST00000470824 ALKBH2Q6NS38 261 aa6.82□□□□□ -1.32
PRPF3-204ENST00000470824 HPS1Q92902 700 aa6.82□□□□□ -1.32
PRPF3-204ENST00000470824 HCN4Q9Y3Q4 1203 aa6.82□□□□□ -1.32
PRPF3-204ENST00000470824 CAPN5O15484 640 aaPredicted RBP6.81□□□□□ -1.32
PRPF3-204ENST00000470824 UPP2O95045 317 aa6.81□□□□□ -1.32
PRPF3-204ENST00000470824 BRD2P25440 801 aaKnown RBP6.81□□□□□ -1.32
PRPF3-204ENST00000470824 AAMPQ13685 434 aa6.81□□□□□ -1.32
PRPF3-204ENST00000470824 NOM1Q5C9Z4 860 aaKnown RBP6.81□□□□□ -1.32
PRPF3-204ENST00000470824 GNASQ5JWF2 1037 aa6.81□□□□□ -1.32
PRPF3-204ENST00000470824 ALDH16A1Q8IZ83 802 aa6.81□□□□□ -1.32
PRPF3-204ENST00000470824 ZNF295-AS1Q8N0V1 137 aa6.81□□□□□ -1.32
PRPF3-204ENST00000470824 RHBDD1Q8TEB9 315 aa6.81□□□□□ -1.32
PRPF3-204ENST00000470824 ZDHHC1Q8WTX9 485 aa6.81□□□□□ -1.32
PRPF3-204ENST00000470824 NGLY1Q96IV0 654 aa6.81□□□□□ -1.32
PRPF3-204ENST00000470824 ASB16Q96NS5 453 aa6.81□□□□□ -1.32
PRPF3-204ENST00000470824 GRIP2Q9C0E4 1043 aa6.81□□□□□ -1.32
PRPF3-204ENST00000470824 QTRT2Q9H974 415 aaKnown RBP6.81□□□□□ -1.32
PRPF3-204ENST00000470824 POTECB2RU33 542 aa6.8□□□□□ -1.32
PRPF3-204ENST00000470824 TNFRSF10BO14763 440 aa6.8□□□□□ -1.32
PRPF3-204ENST00000470824 NDUFB5O43674 189 aa6.8□□□□□ -1.32
PRPF3-204ENST00000470824 EIF1AXP47813 144 aaKnown RBP6.8□□□□□ -1.32
PRPF3-204ENST00000470824 RNF144AP50876 292 aaPredicted RBP6.8□□□□□ -1.32
PRPF3-204ENST00000470824 RTN1Q16799 776 aa6.8□□□□□ -1.32
PRPF3-204ENST00000470824 ABTB2Q8N961 1025 aa6.8□□□□□ -1.32
PRPF3-204ENST00000470824 BCL2L13Q9BXK5 485 aa6.8□□□□□ -1.32
PRPF3-204ENST00000470824 BRPF3Q9ULD4 1205 aa6.8□□□□□ -1.32
PRPF3-204ENST00000470824 LRFN2Q9ULH4 789 aa6.8□□□□□ -1.32
PRPF3-204ENST00000470824 PARP3Q9Y6F1 533 aa6.8□□□□□ -1.32
PRPF3-204ENST00000470824 ST8SIA5O15466 376 aa6.79□□□□□ -1.32
PRPF3-204ENST00000470824 SPINT1O43278 529 aa6.79□□□□□ -1.32
PRPF3-204ENST00000470824 C11orf91Q3C1V1 193 aa6.79□□□□□ -1.32
PRPF3-204ENST00000470824 SH3PXD2AQ5TCZ1 1133 aa6.79□□□□□ -1.32
PRPF3-204ENST00000470824 C1orf53Q5VUE5 145 aa6.79□□□□□ -1.32
PRPF3-204ENST00000470824 NPAS4Q8IUM7 802 aa6.79□□□□□ -1.32
PRPF3-204ENST00000470824 CITED4Q96RK1 184 aa6.79□□□□□ -1.32
PRPF3-204ENST00000470824 INSM2Q96T92 566 aaPredicted RBP6.79□□□□□ -1.32
PRPF3-204ENST00000470824 RBCK1Q9BYM8 510 aa6.79□□□□□ -1.32
PRPF3-204ENST00000470824 PHACTR1Q9C0D0 580 aa6.79□□□□□ -1.32
PRPF3-204ENST00000470824 RGL4Q8IZJ4 473 aa6.78□□□□□ -1.32
PRPF3-204ENST00000470824 LINC00528Q8N1L1 170 aa6.78□□□□□ -1.32
PRPF3-204ENST00000470824 POLMQ9NP87 494 aaPredicted RBP6.78□□□□□ -1.32
PRPF3-204ENST00000470824 PLA2G4AP47712 749 aa6.77□□□□□ -1.33
PRPF3-204ENST00000470824 DGKZQ13574 1117 aa6.77□□□□□ -1.33
PRPF3-204ENST00000470824 COL19A1Q14993 1142 aa6.77□□□□□ -1.33
PRPF3-204ENST00000470824 C4orf17Q53FE4 359 aa6.77□□□□□ -1.33
PRPF3-204ENST00000470824 ZNF326Q5BKZ1 582 aaKnown RBP6.77□□□□□ -1.33
PRPF3-204ENST00000470824 TMC1Q8TDI8 760 aa6.77□□□□□ -1.33
PRPF3-204ENST00000470824 IFT43Q96FT9 208 aa6.77□□□□□ -1.33
PRPF3-204ENST00000470824 SPATA31C2B4DYI2 1134 aa6.76□□□□□ -1.33
PRPF3-204ENST00000470824 BMP2P12643 396 aa6.76□□□□□ -1.33
PRPF3-204ENST00000470824 ZNF16P17020 682 aaPredicted RBP6.76□□□□□ -1.33
PRPF3-204ENST00000470824 NBPF1Q3BBV0 1214 aa6.76□□□□□ -1.33
PRPF3-204ENST00000470824 GIPC2Q8TF65 315 aa6.76□□□□□ -1.33
PRPF3-204ENST00000470824 AIDAQ96BJ3 306 aa6.76□□□□□ -1.33
PRPF3-204ENST00000470824 ZBTB39O15060 712 aa6.75□□□□□ -1.33
PRPF3-204ENST00000470824 FZD6O60353 706 aa6.75□□□□□ -1.33
PRPF3-204ENST00000470824 TXLNAP40222 546 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms