RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 SH2B1Q9NRF2 756 aaPredicted RBP16.64■□□□□ 0.25
HDAC7-219ENST00000470668 MAGI3Q5TCQ9 1506 aa16.64■□□□□ 0.25
HDAC7-219ENST00000470668 FAM83GA6ND36 823 aa16.64■□□□□ 0.25
HDAC7-219ENST00000470668 TOP1P11387 765 aaKnown RBP16.64■□□□□ 0.25
HDAC7-219ENST00000470668 GTF2A1P52655 376 aaPredicted RBP16.64■□□□□ 0.25
HDAC7-219ENST00000470668 DHX8Q14562 1220 aaKnown RBP16.64■□□□□ 0.25
HDAC7-219ENST00000470668 ZNF397Q8NF99 534 aaPredicted RBP16.64■□□□□ 0.25
HDAC7-219ENST00000470668 SMTNL1A8MU46 457 aa16.63■□□□□ 0.25
HDAC7-219ENST00000470668 JMYQ8N9B5 988 aa16.63■□□□□ 0.25
HDAC7-219ENST00000470668 FSIP1Q8NA03 581 aa16.63■□□□□ 0.25
HDAC7-219ENST00000470668 USP26Q9BXU7 913 aa16.63■□□□□ 0.25
HDAC7-219ENST00000470668 ZSCAN12O43309 604 aa16.63■□□□□ 0.25
HDAC7-219ENST00000470668 GNG11P61952 73 aa16.63■□□□□ 0.25
HDAC7-219ENST00000470668 CEP89Q96ST8 783 aa16.63■□□□□ 0.25
HDAC7-219ENST00000470668 CRACR2AQ9BSW2 395 aa16.63■□□□□ 0.25
HDAC7-219ENST00000470668 CASQ1P31415 396 aa16.62■□□□□ 0.25
HDAC7-219ENST00000470668 TYRO3Q06418 890 aa16.62■□□□□ 0.25
HDAC7-219ENST00000470668 CPLX3Q8WVH0 158 aa16.62■□□□□ 0.25
HDAC7-219ENST00000470668 PZPP20742 1482 aa16.62■□□□□ 0.25
HDAC7-219ENST00000470668 CD109Q6YHK3 1445 aa16.62■□□□□ 0.25
HDAC7-219ENST00000470668 PDE1AP54750 535 aa16.62■□□□□ 0.25
HDAC7-219ENST00000470668 IRX3P78415 501 aaPredicted RBP16.62■□□□□ 0.25
HDAC7-219ENST00000470668 OTUD7AQ8TE49 926 aaPredicted RBP16.62■□□□□ 0.25
HDAC7-219ENST00000470668 BOLA2Q9H3K6 86 aa16.62■□□□□ 0.25
HDAC7-219ENST00000470668 WDR62O43379 1518 aa16.62■□□□□ 0.25
HDAC7-219ENST00000470668 SYCP2Q9BX26 1530 aa16.62■□□□□ 0.25
HDAC7-219ENST00000470668 TCOF1Q13428 1488 aaKnown RBP16.62■□□□□ 0.25
HDAC7-219ENST00000470668 ABCC11Q96J66 1382 aa16.62■□□□□ 0.25
HDAC7-219ENST00000470668 PLEKHM2Q8IWE5 1019 aa16.62■□□□□ 0.25
HDAC7-219ENST00000470668 RNF216Q9NWF9 866 aaPredicted RBP16.62■□□□□ 0.25
HDAC7-219ENST00000470668 DHX16O60231 1041 aaKnown RBP16.61■□□□□ 0.25
HDAC7-219ENST00000470668 GADD45BO75293 160 aaPredicted RBP16.61■□□□□ 0.25
HDAC7-219ENST00000470668 GLRX3O76003 335 aaKnown RBP16.61■□□□□ 0.25
HDAC7-219ENST00000470668 RTEL1-TNFRSF6BF6WH68 1400 aa16.61■□□□□ 0.25
HDAC7-219ENST00000470668 TRAPPC8Q9Y2L5 1435 aa16.61■□□□□ 0.25
HDAC7-219ENST00000470668 CCDC171Q6TFL3 1326 aa16.61■□□□□ 0.25
HDAC7-219ENST00000470668 GSDMDP57764 484 aa16.61■□□□□ 0.25
HDAC7-219ENST00000470668 CCDC191Q8NCU4 936 aa16.61■□□□□ 0.25
HDAC7-219ENST00000470668 KIF1BPQ96EK5 621 aa16.61■□□□□ 0.25
HDAC7-219ENST00000470668 PRAG1Q86YV5 1406 aa16.61■□□□□ 0.25
HDAC7-219ENST00000470668 EPB41L2O43491 1005 aaKnown RBP16.61■□□□□ 0.25
HDAC7-219ENST00000470668 MBIPQ9NS73 344 aa16.61■□□□□ 0.25
HDAC7-219ENST00000470668 RSPH14Q9UHP6 348 aa16.61■□□□□ 0.25
HDAC7-219ENST00000470668 F13A1P00488 732 aa16.6■□□□□ 0.25
HDAC7-219ENST00000470668 NUDT16Q96DE0 195 aaKnown RBP16.6■□□□□ 0.25
HDAC7-219ENST00000470668 ESYT1Q9BSJ8 1104 aa16.6■□□□□ 0.25
HDAC7-219ENST00000470668 HSP90AA4PQ58FG1 418 aa16.6■□□□□ 0.25
HDAC7-219ENST00000470668 RALGAPBQ86X10 1494 aa16.6■□□□□ 0.25
HDAC7-219ENST00000470668 MNAT1P51948 309 aa16.6■□□□□ 0.25
HDAC7-219ENST00000470668 KLHL10Q6JEL2 608 aa16.6■□□□□ 0.25
HDAC7-219ENST00000470668 CARD14Q9BXL6 1004 aa16.6■□□□□ 0.25
HDAC7-219ENST00000470668 ERC1Q8IUD2 1116 aa16.59■□□□□ 0.25
HDAC7-219ENST00000470668 ARFGAP3Q9NP61 516 aa16.59■□□□□ 0.25
HDAC7-219ENST00000470668 TXLNBQ8N3L3 684 aa16.59■□□□□ 0.25
HDAC7-219ENST00000470668 CCT2P78371 535 aaKnown RBP16.59■□□□□ 0.25
HDAC7-219ENST00000470668 STX1AQ16623 288 aa16.59■□□□□ 0.25
HDAC7-219ENST00000470668 GIMAP7Q8NHV1 300 aa16.59■□□□□ 0.25
HDAC7-219ENST00000470668 CCDC69A6NI79 296 aa16.59■□□□□ 0.25
HDAC7-219ENST00000470668 TSPYL6Q8N831 410 aa16.59■□□□□ 0.25
HDAC7-219ENST00000470668 CCDC47Q96A33 483 aaKnown RBP16.59■□□□□ 0.25
HDAC7-219ENST00000470668 SCAF11Q99590 1463 aaKnown RBP16.58■□□□□ 0.25
HDAC7-219ENST00000470668 PHACTR2O75167 634 aa16.58■□□□□ 0.25
HDAC7-219ENST00000470668 SYT10Q6XYQ8 523 aa16.58■□□□□ 0.25
HDAC7-219ENST00000470668 FANCAO15360 1455 aa16.58■□□□□ 0.25
HDAC7-219ENST00000470668 CEBPAP49715 358 aaPredicted RBP16.58■□□□□ 0.24
HDAC7-219ENST00000470668 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.24
HDAC7-219ENST00000470668 CCAR1Q8IX12 1150 aaKnown RBP16.58■□□□□ 0.24
HDAC7-219ENST00000470668 TTC5Q8N0Z6 440 aa16.58■□□□□ 0.24
HDAC7-219ENST00000470668 NLRP2Q9NX02 1062 aa16.58■□□□□ 0.24
HDAC7-219ENST00000470668 ERICH2A1L162 156 aa16.58■□□□□ 0.24
HDAC7-219ENST00000470668 LIG1P18858 919 aa16.58■□□□□ 0.24
HDAC7-219ENST00000470668 RRP12Q5JTH9 1297 aaKnown RBP16.58■□□□□ 0.24
HDAC7-219ENST00000470668 FAM173BQ6P4H8 233 aa16.58■□□□□ 0.24
HDAC7-219ENST00000470668 CCDC61Q9Y6R9 512 aa16.58■□□□□ 0.24
HDAC7-219ENST00000470668 CALRP27797 417 aaKnown RBP16.57■□□□□ 0.24
HDAC7-219ENST00000470668 ESCO1Q5FWF5 840 aa16.57■□□□□ 0.24
HDAC7-219ENST00000470668 SMARCC1Q92922 1105 aaPredicted RBP16.57■□□□□ 0.24
HDAC7-219ENST00000470668 DISP1Q96F81 1524 aa16.57■□□□□ 0.24
HDAC7-219ENST00000470668 CCDC8Q9H0W5 538 aaPredicted RBP16.57■□□□□ 0.24
HDAC7-219ENST00000470668 KIF5CO60282 957 aa16.57■□□□□ 0.24
HDAC7-219ENST00000470668 CD2BP2O95400 341 aaKnown RBP16.57■□□□□ 0.24
HDAC7-219ENST00000470668 PDIA4P13667 645 aaKnown RBP16.57■□□□□ 0.24
HDAC7-219ENST00000470668 CAPN2P17655 700 aa16.57■□□□□ 0.24
HDAC7-219ENST00000470668 SYT1P21579 422 aa16.57■□□□□ 0.24
HDAC7-219ENST00000470668 ELF2Q15723 593 aa16.57■□□□□ 0.24
HDAC7-219ENST00000470668 GBP3Q9H0R5 595 aa16.57■□□□□ 0.24
HDAC7-219ENST00000470668 RAI14Q9P0K7 980 aa16.57■□□□□ 0.24
HDAC7-219ENST00000470668 KIAA0556O60303 1618 aa16.57■□□□□ 0.24
HDAC7-219ENST00000470668 CTAGE5O15320 804 aa16.56■□□□□ 0.24
HDAC7-219ENST00000470668 CPA1P15085 419 aa16.56■□□□□ 0.24
HDAC7-219ENST00000470668 ANKRD44Q8N8A2 993 aa16.56■□□□□ 0.24
HDAC7-219ENST00000470668 CCDC12Q8WUD4 166 aaPredicted RBP16.56■□□□□ 0.24
HDAC7-219ENST00000470668 SLC3A2P08195 630 aaKnown RBP16.56■□□□□ 0.24
HDAC7-219ENST00000470668 CCDC181Q5TID7 509 aa16.56■□□□□ 0.24
HDAC7-219ENST00000470668 C14orf93Q9H972 538 aaKnown RBP16.56■□□□□ 0.24
HDAC7-219ENST00000470668 RPGRIP1LQ68CZ1 1315 aa16.56■□□□□ 0.24
HDAC7-219ENST00000470668 DMTNQ08495 405 aa16.56■□□□□ 0.24
HDAC7-219ENST00000470668 KRT32Q14532 448 aa16.56■□□□□ 0.24
HDAC7-219ENST00000470668 SYTL4Q96C24 671 aaPredicted RBP16.56■□□□□ 0.24
HDAC7-219ENST00000470668 AOPEPQ8N6M6 819 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms