RNA–Protein interactions for RNA: ENST00000470471.1

PTK7-209, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 854 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-209ENST00000470471 CNTNAP4Q9C0A0 1308 aa15.07■□□□□ 0
PTK7-209ENST00000470471 VIRMAQ69YN4 1812 aaKnown RBP15.06■□□□□ 0
PTK7-209ENST00000470471 A0A0G2JLW4 131 aa15.06■□□□□ 0
PTK7-209ENST00000470471 PRR29P0C7W0 189 aa15.06■□□□□ 0
PTK7-209ENST00000470471 CRKLP46109 303 aaKnown RBP15.06■□□□□ 0
PTK7-209ENST00000470471 C4AP0C0L4 1744 aa15.06■□□□□ 0
PTK7-209ENST00000470471 RNMTO43148 476 aaKnown RBP15.05■□□□□ -0
PTK7-209ENST00000470471 DNAJC10Q8IXB1 793 aa15.05■□□□□ -0
PTK7-209ENST00000470471 ADCY9O60503 1353 aa15.05■□□□□ -0
PTK7-209ENST00000470471 PXDNLA1KZ92 1463 aa15.05■□□□□ -0
PTK7-209ENST00000470471 COL3A1P02461 1466 aaPredicted RBP15.04■□□□□ -0
PTK7-209ENST00000470471 ATP10DQ9P241 1426 aa15.04■□□□□ -0
PTK7-209ENST00000470471 HMGB2P26583 209 aaKnown RBP15.04■□□□□ -0
PTK7-209ENST00000470471 DDR1Q08345 913 aa15.04■□□□□ -0
PTK7-209ENST00000470471 GSE1Q14687 1217 aa15.04■□□□□ -0
PTK7-209ENST00000470471 AKAP4Q5JQC9 854 aa15.04■□□□□ -0
PTK7-209ENST00000470471 SLC52A2Q9HAB3 445 aa15.04■□□□□ -0
PTK7-209ENST00000470471 CICQ96RK0 1608 aaPredicted RBP15.03■□□□□ -0
PTK7-209ENST00000470471 DPEP1P16444 411 aa15.03■□□□□ -0
PTK7-209ENST00000470471 CNGB1Q14028 1251 aaPredicted RBP15.03■□□□□ -0
PTK7-209ENST00000470471 C1orf141Q5JVX7 400 aa15.03■□□□□ -0
PTK7-209ENST00000470471 PAXIP1Q6ZW49 1069 aaPredicted RBP15.03■□□□□ -0
PTK7-209ENST00000470471 NLGN1Q8N2Q7 840 aa15.03■□□□□ -0
PTK7-209ENST00000470471 TM4SF1P30408 202 aa15.02■□□□□ -0
PTK7-209ENST00000470471 CFAP44Q96MT7 982 aa15.02■□□□□ -0
PTK7-209ENST00000470471 BRCA1P38398 1863 aaKnown RBP15.01□□□□□ -0.01
PTK7-209ENST00000470471 C10orf71Q711Q0 1435 aa15.01□□□□□ -0.01
PTK7-209ENST00000470471 CYP19A1P11511 503 aaPredicted RBP15.01□□□□□ -0.01
PTK7-209ENST00000470471 RFC4P35249 363 aa15.01□□□□□ -0.01
PTK7-209ENST00000470471 IL17REQ8NFR9 667 aa15.01□□□□□ -0.01
PTK7-209ENST00000470471 KCPQ6ZWJ8 1503 aa15.01□□□□□ -0.01
PTK7-209ENST00000470471 SENP3-EIF4A1A0A087X0R7 540 aa15□□□□□ -0.01
PTK7-209ENST00000470471 DIAPH1O60610 1272 aaKnown RBP15□□□□□ -0.01
PTK7-209ENST00000470471 GIGYF1O75420 1035 aaPredicted RBP15□□□□□ -0.01
PTK7-209ENST00000470471 REM2Q8IYK8 340 aaPredicted RBP15□□□□□ -0.01
PTK7-209ENST00000470471 BCL2L12Q9HB09 334 aa15□□□□□ -0.01
PTK7-209ENST00000470471 USP42Q9H9J4 1324 aaKnown RBP14.99□□□□□ -0.01
PTK7-209ENST00000470471 TGFB2P61812 414 aa14.99□□□□□ -0.01
PTK7-209ENST00000470471 ZNF526Q8TF50 670 aaPredicted RBP14.99□□□□□ -0.01
PTK7-209ENST00000470471 PHACTR3Q96KR7 559 aa14.99□□□□□ -0.01
PTK7-209ENST00000470471 MRC1P22897 1456 aa14.99□□□□□ -0.01
PTK7-209ENST00000470471 NPC1L1Q9UHC9 1359 aa14.98□□□□□ -0.01
PTK7-209ENST00000470471 SOS1Q07889 1333 aaPredicted RBP14.98□□□□□ -0.01
PTK7-209ENST00000470471 DCAF8Q5TAQ9 597 aa14.98□□□□□ -0.01
PTK7-209ENST00000470471 POLRMTO00411 1230 aaKnown RBP14.97□□□□□ -0.01
PTK7-209ENST00000470471 KIF3CO14782 793 aa14.97□□□□□ -0.01
PTK7-209ENST00000470471 KCNQ3O43525 872 aa14.97□□□□□ -0.01
PTK7-209ENST00000470471 USPL1Q5W0Q7 1092 aa14.97□□□□□ -0.01
PTK7-209ENST00000470471 VSIG10Q8N0Z9 540 aa14.97□□□□□ -0.01
PTK7-209ENST00000470471 CCDC87Q9NVE4 849 aa14.97□□□□□ -0.01
PTK7-209ENST00000470471 ZBTB1Q9Y2K1 713 aa14.97□□□□□ -0.01
PTK7-209ENST00000470471 CHRNA5P30532 468 aa14.96□□□□□ -0.01
PTK7-209ENST00000470471 BCS1LQ9Y276 419 aa14.96□□□□□ -0.01
PTK7-209ENST00000470471 AFDNP55196 1824 aaKnown RBP14.95□□□□□ -0.02
PTK7-209ENST00000470471 PARP3Q9Y6F1 533 aa14.95□□□□□ -0.02
PTK7-209ENST00000470471 UBR2Q8IWV8 1755 aa14.95□□□□□ -0.02
PTK7-209ENST00000470471 SIPA1L3O60292 1781 aaPredicted RBP14.94□□□□□ -0.02
PTK7-209ENST00000470471 PRELPP51888 382 aa14.94□□□□□ -0.02
PTK7-209ENST00000470471 NUBP1P53384 320 aa14.94□□□□□ -0.02
PTK7-209ENST00000470471 NFIXQ14938 502 aa14.94□□□□□ -0.02
PTK7-209ENST00000470471 ARHGAP27Q6ZUM4 889 aa14.94□□□□□ -0.02
PTK7-209ENST00000470471 ZNF496Q96IT1 587 aaPredicted RBP14.94□□□□□ -0.02
PTK7-209ENST00000470471 SPRYD3Q8NCJ5 442 aa14.93□□□□□ -0.02
PTK7-209ENST00000470471 RSPH6AQ9H0K4 717 aa14.93□□□□□ -0.02
PTK7-209ENST00000470471 GPBP1L1Q9HC44 474 aaPredicted RBP14.93□□□□□ -0.02
PTK7-209ENST00000470471 CREBZFQ9NS37 354 aa14.93□□□□□ -0.02
PTK7-209ENST00000470471 NARFQ9UHQ1 456 aa14.93□□□□□ -0.02
PTK7-209ENST00000470471 U2SURPO15042 1029 aaKnown RBP14.92□□□□□ -0.02
PTK7-209ENST00000470471 FCHSD2O94868 740 aa14.92□□□□□ -0.02
PTK7-209ENST00000470471 EIF5P55010 431 aaKnown RBP14.92□□□□□ -0.02
PTK7-209ENST00000470471 ARFGEF1Q9Y6D6 1849 aa14.92□□□□□ -0.02
PTK7-209ENST00000470471 SBF1O95248 1867 aa14.91□□□□□ -0.02
PTK7-209ENST00000470471 PRAMEF22A3QJZ6 481 aa14.91□□□□□ -0.02
PTK7-209ENST00000470471 NRXN2Q9P2S2 1712 aa14.91□□□□□ -0.02
PTK7-209ENST00000470471 CEMIPQ8WUJ3 1361 aa14.9□□□□□ -0.02
PTK7-209ENST00000470471 GNAT3A8MTJ3 354 aa14.9□□□□□ -0.02
PTK7-209ENST00000470471 CANXP27824 592 aaKnown RBP14.9□□□□□ -0.02
PTK7-209ENST00000470471 PPP2R1AP30153 589 aa14.9□□□□□ -0.02
PTK7-209ENST00000470471 ZNF790Q6PG37 636 aa14.9□□□□□ -0.02
PTK7-209ENST00000470471 FAM212AQ96EL1 285 aa14.9□□□□□ -0.02
PTK7-209ENST00000470471 COL15A1P39059 1388 aa14.89□□□□□ -0.03
PTK7-209ENST00000470471 CARMIL3Q8ND23 1372 aa14.89□□□□□ -0.03
PTK7-209ENST00000470471 ZPR1O75312 459 aa14.89□□□□□ -0.03
PTK7-209ENST00000470471 A1BGP04217 495 aa14.89□□□□□ -0.03
PTK7-209ENST00000470471 PRKAR2BP31323 418 aa14.89□□□□□ -0.03
PTK7-209ENST00000470471 NMRK2Q9NPI5 230 aa14.89□□□□□ -0.03
PTK7-209ENST00000470471 PIM2Q9P1W9 311 aa14.89□□□□□ -0.03
PTK7-209ENST00000470471 PCNTO95613 3336 aa14.89□□□□□ -0.03
PTK7-209ENST00000470471 SERPINB2P05120 415 aa14.88□□□□□ -0.03
PTK7-209ENST00000470471 C9orf131Q5VYM1 1079 aa14.88□□□□□ -0.03
PTK7-209ENST00000470471 CCDC24Q8N4L8 307 aa14.88□□□□□ -0.03
PTK7-209ENST00000470471 USP16Q9Y5T5 823 aa14.88□□□□□ -0.03
PTK7-209ENST00000470471 HEG1Q9ULI3 1381 aa14.87□□□□□ -0.03
PTK7-209ENST00000470471 PIP4K2AP48426 406 aaPredicted RBP14.87□□□□□ -0.03
PTK7-209ENST00000470471 DCTN1Q14203 1278 aa14.87□□□□□ -0.03
PTK7-209ENST00000470471 DALRD3Q5D0E6 543 aaKnown RBP14.87□□□□□ -0.03
PTK7-209ENST00000470471 TBC1D9BQ66K14 1250 aa14.87□□□□□ -0.03
PTK7-209ENST00000470471 TBC1D2BQ9UPU7 963 aa14.87□□□□□ -0.03
PTK7-209ENST00000470471 ANKRD31Q8N7Z5 1873 aa14.86□□□□□ -0.03
PTK7-209ENST00000470471 GAS2L2Q8NHY3 880 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms