RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 RPGRIP1LQ68CZ1 1315 aa8.5□□□□□ -1.05
CHD6-206ENST00000470470 ADH1CP00326 375 aa8.5□□□□□ -1.05
CHD6-206ENST00000470470 KCNH2Q12809 1159 aa8.5□□□□□ -1.05
CHD6-206ENST00000470470 PDE3BQ13370 1112 aa8.5□□□□□ -1.05
CHD6-206ENST00000470470 NNTQ13423 1086 aa8.5□□□□□ -1.05
CHD6-206ENST00000470470 SCARF1Q14162 830 aa8.5□□□□□ -1.05
CHD6-206ENST00000470470 MRPL14Q6P1L8 145 aaKnown RBP8.5□□□□□ -1.05
CHD6-206ENST00000470470 ADGRB3O60242 1522 aa8.5□□□□□ -1.05
CHD6-206ENST00000470470 EIF3AQ14152 1382 aaKnown RBP8.49□□□□□ -1.05
CHD6-206ENST00000470470 SBNO2Q9Y2G9 1366 aa8.49□□□□□ -1.05
CHD6-206ENST00000470470 ABCA6Q8N139 1617 aa8.49□□□□□ -1.05
CHD6-206ENST00000470470 RICTORQ6R327 1708 aa8.49□□□□□ -1.05
CHD6-206ENST00000470470 MROH2AA6NES4 1674 aa8.49□□□□□ -1.05
CHD6-206ENST00000470470 KDM5AP29375 1690 aaKnown RBP8.49□□□□□ -1.05
CHD6-206ENST00000470470 SPDYE5A6NIY4 337 aa8.49□□□□□ -1.05
CHD6-206ENST00000470470 LINC01559Q495D7 138 aa8.49□□□□□ -1.05
CHD6-206ENST00000470470 TMEM151AQ8N4L1 468 aa8.49□□□□□ -1.05
CHD6-206ENST00000470470 RSPH6AQ9H0K4 717 aa8.49□□□□□ -1.05
CHD6-206ENST00000470470 PANK3Q9H999 370 aa8.49□□□□□ -1.05
CHD6-206ENST00000470470 MYOM1P52179 1685 aa8.48□□□□□ -1.05
CHD6-206ENST00000470470 ZC3H13Q5T200 1668 aaKnown RBP8.48□□□□□ -1.05
CHD6-206ENST00000470470 ARHGAP31Q2M1Z3 1444 aa8.48□□□□□ -1.05
CHD6-206ENST00000470470 PIK3C2BO00750 1634 aa8.48□□□□□ -1.05
CHD6-206ENST00000470470 BAP1Q92560 729 aa8.48□□□□□ -1.05
CHD6-206ENST00000470470 NOS1P29475 1434 aa8.47□□□□□ -1.05
CHD6-206ENST00000470470 ABCC3O15438 1527 aa8.47□□□□□ -1.05
CHD6-206ENST00000470470 CAMSAP1Q5T5Y3 1602 aa8.47□□□□□ -1.05
CHD6-206ENST00000470470 TIMP2P16035 220 aa8.47□□□□□ -1.05
CHD6-206ENST00000470470 DIP2CQ9Y2E4 1556 aa8.47□□□□□ -1.05
CHD6-206ENST00000470470 BLMP54132 1417 aaPredicted RBP8.46□□□□□ -1.05
CHD6-206ENST00000470470 NPATQ14207 1427 aa8.46□□□□□ -1.05
CHD6-206ENST00000470470 MTMR2Q13614 643 aa8.46□□□□□ -1.06
CHD6-206ENST00000470470 PRR7Q8TB68 274 aa8.46□□□□□ -1.06
CHD6-206ENST00000470470 SPIRE2Q8WWL2 714 aa8.46□□□□□ -1.06
CHD6-206ENST00000470470 PUS7Q96PZ0 661 aaKnown RBP8.46□□□□□ -1.06
CHD6-206ENST00000470470 ASXL1Q8IXJ9 1541 aa8.46□□□□□ -1.06
CHD6-206ENST00000470470 WDR4P57081 412 aaKnown RBP8.45□□□□□ -1.06
CHD6-206ENST00000470470 PURBQ96QR8 312 aaKnown RBP8.45□□□□□ -1.06
CHD6-206ENST00000470470 PIK3C2GO75747 1445 aa8.45□□□□□ -1.06
CHD6-206ENST00000470470 ZFYVE9O95405 1425 aa8.45□□□□□ -1.06
CHD6-206ENST00000470470 CFAP65Q6ZU64 1925 aaKnown RBP8.44□□□□□ -1.06
CHD6-206ENST00000470470 UGGT1Q9NYU2 1555 aa8.44□□□□□ -1.06
CHD6-206ENST00000470470 ERVK-7P63135 1459 aa8.44□□□□□ -1.06
CHD6-206ENST00000470470 GDF11O95390 407 aa8.44□□□□□ -1.06
CHD6-206ENST00000470470 RASSF7Q02833 373 aa8.44□□□□□ -1.06
CHD6-206ENST00000470470 FAM174AQ8TBP5 190 aa8.44□□□□□ -1.06
CHD6-206ENST00000470470 PCMTD1Q96MG8 357 aaPredicted RBP8.44□□□□□ -1.06
CHD6-206ENST00000470470 C14orf93Q9H972 538 aaKnown RBP8.44□□□□□ -1.06
CHD6-206ENST00000470470 GOPCQ9HD26 462 aa8.44□□□□□ -1.06
CHD6-206ENST00000470470 ADGRF5Q8IZF2 1346 aa8.44□□□□□ -1.06
CHD6-206ENST00000470470 SIGLEC1Q9BZZ2 1709 aa8.44□□□□□ -1.06
CHD6-206ENST00000470470 MOXD2PA6NHM9 499 aa8.43□□□□□ -1.06
CHD6-206ENST00000470470 SH3D19Q5HYK7 790 aa8.43□□□□□ -1.06
CHD6-206ENST00000470470 CFAP70Q5T0N1 1121 aa8.43□□□□□ -1.06
CHD6-206ENST00000470470 CDK15Q96Q40 435 aa8.43□□□□□ -1.06
CHD6-206ENST00000470470 KLF16Q9BXK1 252 aaPredicted RBP8.43□□□□□ -1.06
CHD6-206ENST00000470470 KNSTRNQ9Y448 316 aa8.43□□□□□ -1.06
CHD6-206ENST00000470470 ADGRB1O14514 1584 aa8.43□□□□□ -1.06
CHD6-206ENST00000470470 REREQ9P2R6 1566 aa8.43□□□□□ -1.06
CHD6-206ENST00000470470 RNF225M0QZC1 329 aaPredicted RBP8.42□□□□□ -1.06
CHD6-206ENST00000470470 PPP2R1AP30153 589 aa8.42□□□□□ -1.06
CHD6-206ENST00000470470 GJA5P36382 358 aa8.42□□□□□ -1.06
CHD6-206ENST00000470470 NDUFV2P19404 249 aa8.41□□□□□ -1.06
CHD6-206ENST00000470470 NGEFQ8N5V2 710 aa8.41□□□□□ -1.06
CHD6-206ENST00000470470 TBC1D2Q9BYX2 928 aa8.41□□□□□ -1.06
CHD6-206ENST00000470470 QRICH2Q9H0J4 1663 aa8.41□□□□□ -1.06
CHD6-206ENST00000470470 USP32Q8NFA0 1604 aa8.4□□□□□ -1.06
CHD6-206ENST00000470470 SKIV2LQ15477 1246 aaKnown RBP8.4□□□□□ -1.06
CHD6-206ENST00000470470 CC2D1BQ5T0F9 858 aaKnown RBP8.4□□□□□ -1.06
CHD6-206ENST00000470470 SLC52A1Q9NWF4 448 aa8.4□□□□□ -1.06
CHD6-206ENST00000470470 RBM19Q9Y4C8 960 aaKnown RBP8.4□□□□□ -1.06
CHD6-206ENST00000470470 AGLP35573 1532 aa8.4□□□□□ -1.06
CHD6-206ENST00000470470 NEXMIFQ5QGS0 1516 aa8.4□□□□□ -1.06
CHD6-206ENST00000470470 PREX1Q8TCU6 1659 aa8.39□□□□□ -1.07
CHD6-206ENST00000470470 IRX6P78412 446 aaPredicted RBP8.39□□□□□ -1.07
CHD6-206ENST00000470470 NR5A1Q13285 461 aa8.39□□□□□ -1.07
CHD6-206ENST00000470470 GGT6Q6P531 493 aa8.39□□□□□ -1.07
CHD6-206ENST00000470470 LYPD8Q6UX82 237 aa8.39□□□□□ -1.07
CHD6-206ENST00000470470 CENPJQ9HC77 1338 aaPredicted RBP8.39□□□□□ -1.07
CHD6-206ENST00000470470 DIP2BQ9P265 1576 aa8.38□□□□□ -1.07
CHD6-206ENST00000470470 MAN1A2O60476 641 aa8.38□□□□□ -1.07
CHD6-206ENST00000470470 RAPGEF3O95398 923 aa8.38□□□□□ -1.07
CHD6-206ENST00000470470 ZIC2O95409 532 aaPredicted RBP8.38□□□□□ -1.07
CHD6-206ENST00000470470 CTHP32929 405 aa8.38□□□□□ -1.07
CHD6-206ENST00000470470 CLK2P49760 499 aaKnown RBP8.38□□□□□ -1.07
CHD6-206ENST00000470470 CNGB1Q14028 1251 aaPredicted RBP8.38□□□□□ -1.07
CHD6-206ENST00000470470 MYSM1Q5VVJ2 828 aa8.38□□□□□ -1.07
CHD6-206ENST00000470470 TMEM131LA2VDJ0 1609 aa8.38□□□□□ -1.07
CHD6-206ENST00000470470 RIMBP3CA6NJZ7 1639 aa8.38□□□□□ -1.07
CHD6-206ENST00000470470 RIMBP3BA6NNM3 1639 aa8.38□□□□□ -1.07
CHD6-206ENST00000470470 RIMBP3Q9UFD9 1639 aa8.38□□□□□ -1.07
CHD6-206ENST00000470470 ARHGEF28Q8N1W1 1705 aaKnown RBP8.38□□□□□ -1.07
CHD6-206ENST00000470470 SOBPA7XYQ1 873 aa8.37□□□□□ -1.07
CHD6-206ENST00000470470 F12P00748 615 aaPredicted RBP8.37□□□□□ -1.07
CHD6-206ENST00000470470 POLR3EQ9NVU0 708 aa8.37□□□□□ -1.07
CHD6-206ENST00000470470 RCAN3Q9UKA8 241 aa8.37□□□□□ -1.07
CHD6-206ENST00000470470 ZNF521Q96K83 1311 aa8.37□□□□□ -1.07
CHD6-206ENST00000470470 FANCIQ9NVI1 1328 aa8.37□□□□□ -1.07
CHD6-206ENST00000470470 MYO5BQ9ULV0 1848 aa8.36□□□□□ -1.07
CHD6-206ENST00000470470 RRP1P56182 461 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms