RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 CHPF2Q9P2E5 772 aa13.77□□□□□ -0.21
SND1-208ENST00000470463 N4BP2Q86UW6 1770 aaPredicted RBP13.76□□□□□ -0.21
SND1-208ENST00000470463 ATP10DQ9P241 1426 aa13.76□□□□□ -0.21
SND1-208ENST00000470463 SLC4A10Q6U841 1118 aa13.76□□□□□ -0.21
SND1-208ENST00000470463 TEX13AQ9BXU3 409 aaPredicted RBP13.76□□□□□ -0.21
SND1-208ENST00000470463 RBM19Q9Y4C8 960 aaKnown RBP13.76□□□□□ -0.21
SND1-208ENST00000470463 ALDH1L1O75891 902 aa13.75□□□□□ -0.21
SND1-208ENST00000470463 GNAI2P04899 355 aa13.75□□□□□ -0.21
SND1-208ENST00000470463 BARGINQ6ZT62 677 aa13.75□□□□□ -0.21
SND1-208ENST00000470463 ANKRD44Q8N8A2 993 aa13.75□□□□□ -0.21
SND1-208ENST00000470463 DDX54Q8TDD1 881 aaKnown RBP13.75□□□□□ -0.21
SND1-208ENST00000470463 DNAAF4Q8WXU2 420 aa13.75□□□□□ -0.21
SND1-208ENST00000470463 NECTIN2Q92692 538 aa13.75□□□□□ -0.21
SND1-208ENST00000470463 SRCIN1Q9C0H9 1055 aa13.75□□□□□ -0.21
SND1-208ENST00000470463 TMOD3Q9NYL9 352 aa13.75□□□□□ -0.21
SND1-208ENST00000470463 ZBTB47Q9UFB7 747 aaPredicted RBP13.75□□□□□ -0.21
SND1-208ENST00000470463 SLIT2O94813 1529 aa13.74□□□□□ -0.21
SND1-208ENST00000470463 BCL9LQ86UU0 1499 aa13.74□□□□□ -0.21
SND1-208ENST00000470463 TNS2Q63HR2 1409 aa13.74□□□□□ -0.21
SND1-208ENST00000470463 SPATA31A1Q5TZJ5 1347 aa13.74□□□□□ -0.21
SND1-208ENST00000470463 KSR2Q6VAB6 950 aa13.74□□□□□ -0.21
SND1-208ENST00000470463 VSIG10Q8N0Z9 540 aa13.74□□□□□ -0.21
SND1-208ENST00000470463 ZNF496Q96IT1 587 aaPredicted RBP13.74□□□□□ -0.21
SND1-208ENST00000470463 USP35Q9P2H5 1018 aa13.74□□□□□ -0.21
SND1-208ENST00000470463 PDZRN3Q9UPQ7 1066 aa13.74□□□□□ -0.21
SND1-208ENST00000470463 NRAPQ86VF7 1730 aa13.73□□□□□ -0.21
SND1-208ENST00000470463 F6X3S4 739 aa13.73□□□□□ -0.21
SND1-208ENST00000470463 SLC39A6Q13433 755 aa13.73□□□□□ -0.21
SND1-208ENST00000470463 FAM161AQ3B820 660 aa13.73□□□□□ -0.21
SND1-208ENST00000470463 PHAXQ9H814 394 aaKnown RBP13.73□□□□□ -0.21
SND1-208ENST00000470463 SHANK3Q9BYB0 1731 aa13.73□□□□□ -0.21
SND1-208ENST00000470463 SPATA31A5Q5VU36 1347 aa13.72□□□□□ -0.21
SND1-208ENST00000470463 SPATA31A7Q8IWB4 1347 aa13.72□□□□□ -0.21
SND1-208ENST00000470463 PI4KAP2A4QPH2 592 aa13.72□□□□□ -0.21
SND1-208ENST00000470463 UBTFL1P0CB47 393 aaPredicted RBP13.72□□□□□ -0.21
SND1-208ENST00000470463 PDE4AP27815 886 aa13.72□□□□□ -0.21
SND1-208ENST00000470463 RGS3P49796 1198 aa13.72□□□□□ -0.21
SND1-208ENST00000470463 NUCB1Q02818 461 aa13.72□□□□□ -0.21
SND1-208ENST00000470463 SEPT12Q8IYM1 358 aa13.72□□□□□ -0.21
SND1-208ENST00000470463 PI4KAP1Q8N8J0 262 aa13.72□□□□□ -0.21
SND1-208ENST00000470463 BACH2Q9BYV9 841 aa13.72□□□□□ -0.21
SND1-208ENST00000470463 PAPPAQ13219 1627 aa13.72□□□□□ -0.21
SND1-208ENST00000470463 WNK3Q9BYP7 1800 aa13.71□□□□□ -0.21
SND1-208ENST00000470463 LAMB4A4D0S4 1761 aa13.71□□□□□ -0.21
SND1-208ENST00000470463 EIF5BO60841 1220 aaKnown RBP13.71□□□□□ -0.21
SND1-208ENST00000470463 NEXNQ0ZGT2 675 aa13.71□□□□□ -0.21
SND1-208ENST00000470463 CEP85Q6P2H3 762 aa13.71□□□□□ -0.21
SND1-208ENST00000470463 DEFB132Q7Z7B7 95 aa13.71□□□□□ -0.21
SND1-208ENST00000470463 CHD1LQ86WJ1 897 aa13.71□□□□□ -0.21
SND1-208ENST00000470463 MEIS3Q99687 375 aa13.71□□□□□ -0.21
SND1-208ENST00000470463 DCTPP1Q9H773 170 aa13.71□□□□□ -0.21
SND1-208ENST00000470463 CCDC9Q9Y3X0 531 aaKnown RBP13.71□□□□□ -0.21
SND1-208ENST00000470463 ONECUT3O60422 494 aaPredicted RBP13.7□□□□□ -0.22
SND1-208ENST00000470463 BAG6P46379 1132 aa13.7□□□□□ -0.22
SND1-208ENST00000470463 DDB1Q16531 1140 aa13.7□□□□□ -0.22
SND1-208ENST00000470463 BEND3Q5T5X7 828 aa13.7□□□□□ -0.22
SND1-208ENST00000470463 LINS1Q8NG48 757 aa13.7□□□□□ -0.22
SND1-208ENST00000470463 UBR2Q8IWV8 1755 aa13.7□□□□□ -0.22
SND1-208ENST00000470463 PDIA6Q15084 440 aa13.69□□□□□ -0.22
SND1-208ENST00000470463 VPS72Q15906 364 aa13.69□□□□□ -0.22
SND1-208ENST00000470463 KRT27Q7Z3Y8 459 aa13.69□□□□□ -0.22
SND1-208ENST00000470463 ATP8B2P98198 1209 aa13.68□□□□□ -0.22
SND1-208ENST00000470463 RIC3Q7Z5B4 369 aa13.68□□□□□ -0.22
SND1-208ENST00000470463 SIRT2Q8IXJ6 389 aa13.68□□□□□ -0.22
SND1-208ENST00000470463 USP44Q9H0E7 712 aa13.68□□□□□ -0.22
SND1-208ENST00000470463 C1orf115Q9H7X2 142 aa13.68□□□□□ -0.22
SND1-208ENST00000470463 MAP3K2Q9Y2U5 619 aa13.68□□□□□ -0.22
SND1-208ENST00000470463 ADCY9O60503 1353 aa13.68□□□□□ -0.22
SND1-208ENST00000470463 BCL9O00512 1426 aa13.67□□□□□ -0.22
SND1-208ENST00000470463 STARD3NLO95772 234 aa13.67□□□□□ -0.22
SND1-208ENST00000470463 HSP90AB4PQ58FF6 505 aa13.67□□□□□ -0.22
SND1-208ENST00000470463 ANKRD45Q5TZF3 282 aa13.67□□□□□ -0.22
SND1-208ENST00000470463 USP16Q9Y5T5 823 aa13.67□□□□□ -0.22
SND1-208ENST00000470463 KCPQ6ZWJ8 1503 aa13.67□□□□□ -0.22
SND1-208ENST00000470463 C5P01031 1676 aa13.66□□□□□ -0.22
SND1-208ENST00000470463 A0A0G2JS52 829 aa13.66□□□□□ -0.22
SND1-208ENST00000470463 ANP32AP39687 249 aaKnown RBP13.66□□□□□ -0.22
SND1-208ENST00000470463 MYT1Q01538 1121 aa13.66□□□□□ -0.22
SND1-208ENST00000470463 ANKRD13DQ6ZTN6 518 aa13.66□□□□□ -0.22
SND1-208ENST00000470463 PLBD2Q8NHP8 589 aa13.66□□□□□ -0.22
SND1-208ENST00000470463 METTL22Q9BUU2 404 aaPredicted RBP13.66□□□□□ -0.22
SND1-208ENST00000470463 C9orf78Q9NZ63 289 aaPredicted RBP13.66□□□□□ -0.22
SND1-208ENST00000470463 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.65□□□□□ -0.22
SND1-208ENST00000470463 PRAMEF22A3QJZ6 481 aa13.65□□□□□ -0.22
SND1-208ENST00000470463 COPS6Q7L5N1 327 aa13.65□□□□□ -0.22
SND1-208ENST00000470463 XAGE3Q8WTP9 111 aa13.65□□□□□ -0.22
SND1-208ENST00000470463 PIGBQ92521 554 aa13.65□□□□□ -0.22
SND1-208ENST00000470463 UTYO14607 1347 aa13.64□□□□□ -0.23
SND1-208ENST00000470463 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
SND1-208ENST00000470463 MYL6BP14649 208 aa13.64□□□□□ -0.23
SND1-208ENST00000470463 MTX1Q13505 466 aa13.64□□□□□ -0.23
SND1-208ENST00000470463 PROSER3Q2NL68 480 aa13.64□□□□□ -0.23
SND1-208ENST00000470463 UPF2Q9HAU5 1272 aaKnown RBP13.64□□□□□ -0.23
SND1-208ENST00000470463 TOGARAM1Q9Y4F4 1720 aa13.64□□□□□ -0.23
SND1-208ENST00000470463 GLI3P10071 1580 aa13.63□□□□□ -0.23
SND1-208ENST00000470463 PTCD1O75127 700 aaKnown RBP13.63□□□□□ -0.23
SND1-208ENST00000470463 ANXA1P04083 346 aa13.63□□□□□ -0.23
SND1-208ENST00000470463 AIMP1Q12904 312 aaKnown RBP13.63□□□□□ -0.23
SND1-208ENST00000470463 C8orf34Q49A92 452 aa13.63□□□□□ -0.23
SND1-208ENST00000470463 BMP2KLQ5H9B9 411 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms