RNA–Protein interactions for RNA: ENST00000470238.1

SCYL3-205, Transcript of SCY1 like pseudokinase 3, humanhuman

TSL 5

Gene SCYL3, Length 1,538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL3-205ENST00000470238 KSR2Q6VAB6 950 aa18.49■□□□□ 0.55
SCYL3-205ENST00000470238 LNPKQ9C0E8 428 aa18.49■□□□□ 0.55
SCYL3-205ENST00000470238 PAPPAQ13219 1627 aa18.49■□□□□ 0.55
SCYL3-205ENST00000470238 PDIA6Q15084 440 aa18.49■□□□□ 0.55
SCYL3-205ENST00000470238 BEND3Q5T5X7 828 aa18.49■□□□□ 0.55
SCYL3-205ENST00000470238 NRAPQ86VF7 1730 aa18.48■□□□□ 0.55
SCYL3-205ENST00000470238 LAMB4A4D0S4 1761 aa18.48■□□□□ 0.55
SCYL3-205ENST00000470238 UBTFL1P0CB47 393 aaPredicted RBP18.48■□□□□ 0.55
SCYL3-205ENST00000470238 CDCA7Q9BWT1 371 aaPredicted RBP18.48■□□□□ 0.55
SCYL3-205ENST00000470238 USP44Q9H0E7 712 aa18.48■□□□□ 0.55
SCYL3-205ENST00000470238 WNK3Q9BYP7 1800 aa18.48■□□□□ 0.55
SCYL3-205ENST00000470238 UBR2Q8IWV8 1755 aa18.47■□□□□ 0.55
SCYL3-205ENST00000470238 NUTM2BA6NNL0 878 aaPredicted RBP18.47■□□□□ 0.55
SCYL3-205ENST00000470238 NUTM2EB1AL46 878 aaPredicted RBP18.47■□□□□ 0.55
SCYL3-205ENST00000470238 NUTM2AQ8IVF1 878 aaPredicted RBP18.47■□□□□ 0.55
SCYL3-205ENST00000470238 ZBTB47Q9UFB7 747 aaPredicted RBP18.47■□□□□ 0.55
SCYL3-205ENST00000470238 MAP3K2Q9Y2U5 619 aa18.47■□□□□ 0.55
SCYL3-205ENST00000470238 THRAP3Q9Y2W1 955 aaKnown RBP18.47■□□□□ 0.55
SCYL3-205ENST00000470238 NWD2Q9ULI1 1742 aa18.46■□□□□ 0.55
SCYL3-205ENST00000470238 TOGARAM1Q9Y4F4 1720 aa18.46■□□□□ 0.55
SCYL3-205ENST00000470238 GLI3P10071 1580 aa18.46■□□□□ 0.55
SCYL3-205ENST00000470238 TMOD3Q9NYL9 352 aa18.46■□□□□ 0.55
SCYL3-205ENST00000470238 TNS2Q63HR2 1409 aa18.45■□□□□ 0.54
SCYL3-205ENST00000470238 EXOC5O00471 708 aa18.45■□□□□ 0.54
SCYL3-205ENST00000470238 ALDH1L1O75891 902 aa18.45■□□□□ 0.54
SCYL3-205ENST00000470238 ERBB4Q15303 1308 aa18.45■□□□□ 0.54
SCYL3-205ENST00000470238 KCPQ6ZWJ8 1503 aa18.45■□□□□ 0.54
SCYL3-205ENST00000470238 LRP6O75581 1613 aa18.45■□□□□ 0.54
SCYL3-205ENST00000470238 USP16Q9Y5T5 823 aa18.44■□□□□ 0.54
SCYL3-205ENST00000470238 LRRFIP2Q9Y608 721 aaKnown RBP18.44■□□□□ 0.54
SCYL3-205ENST00000470238 SPATA31A1Q5TZJ5 1347 aa18.44■□□□□ 0.54
SCYL3-205ENST00000470238 MYL6BP14649 208 aa18.44■□□□□ 0.54
SCYL3-205ENST00000470238 ATP8B2P98198 1209 aa18.44■□□□□ 0.54
SCYL3-205ENST00000470238 HDAC5Q9UQL6 1122 aa18.44■□□□□ 0.54
SCYL3-205ENST00000470238 JCADQ9P266 1359 aa18.43■□□□□ 0.54
SCYL3-205ENST00000470238 AIMP1Q12904 312 aaKnown RBP18.43■□□□□ 0.54
SCYL3-205ENST00000470238 SLIT2O94813 1529 aa18.43■□□□□ 0.54
SCYL3-205ENST00000470238 RIC3Q7Z5B4 369 aa18.42■□□□□ 0.54
SCYL3-205ENST00000470238 NPM2Q86SE8 214 aaKnown RBP18.42■□□□□ 0.54
SCYL3-205ENST00000470238 LINS1Q8NG48 757 aa18.42■□□□□ 0.54
SCYL3-205ENST00000470238 XAGE3Q8WTP9 111 aa18.42■□□□□ 0.54
SCYL3-205ENST00000470238 IBTKQ9P2D0 1353 aaPredicted RBP18.41■□□□□ 0.54
SCYL3-205ENST00000470238 AEBP2Q6ZN18 517 aaPredicted RBP18.41■□□□□ 0.54
SCYL3-205ENST00000470238 COPS6Q7L5N1 327 aa18.41■□□□□ 0.54
SCYL3-205ENST00000470238 LRP10Q7Z4F1 713 aa18.41■□□□□ 0.54
SCYL3-205ENST00000470238 NEXNQ0ZGT2 675 aa18.4■□□□□ 0.54
SCYL3-205ENST00000470238 SPATA31A5Q5VU36 1347 aa18.4■□□□□ 0.54
SCYL3-205ENST00000470238 SPATA31A7Q8IWB4 1347 aa18.4■□□□□ 0.54
SCYL3-205ENST00000470238 PTCD1O75127 700 aaKnown RBP18.39■□□□□ 0.54
SCYL3-205ENST00000470238 C9orf78Q9NZ63 289 aaPredicted RBP18.39■□□□□ 0.54
SCYL3-205ENST00000470238 NBPF7P0C2Y1 421 aaPredicted RBP18.39■□□□□ 0.53
SCYL3-205ENST00000470238 BMP2KLQ5H9B9 411 aa18.39■□□□□ 0.53
SCYL3-205ENST00000470238 ANKRD13DQ6ZTN6 518 aa18.39■□□□□ 0.53
SCYL3-205ENST00000470238 PIGBQ92521 554 aa18.39■□□□□ 0.53
SCYL3-205ENST00000470238 PNMA6EA0A0J9YXQ4 647 aa18.38■□□□□ 0.53
SCYL3-205ENST00000470238 DDB1Q16531 1140 aa18.38■□□□□ 0.53
SCYL3-205ENST00000470238 BARGINQ6ZT62 677 aa18.38■□□□□ 0.53
SCYL3-205ENST00000470238 METTL22Q9BUU2 404 aaPredicted RBP18.38■□□□□ 0.53
SCYL3-205ENST00000470238 TEX13AQ9BXU3 409 aaPredicted RBP18.38■□□□□ 0.53
SCYL3-205ENST00000470238 ITGB4P16144 1822 aa18.38■□□□□ 0.53
SCYL3-205ENST00000470238 BCL9O00512 1426 aa18.37■□□□□ 0.53
SCYL3-205ENST00000470238 CWF19L2Q2TBE0 894 aaKnown RBP18.37■□□□□ 0.53
SCYL3-205ENST00000470238 VSIG10Q8N0Z9 540 aa18.37■□□□□ 0.53
SCYL3-205ENST00000470238 CERKQ8TCT0 537 aa18.37■□□□□ 0.53
SCYL3-205ENST00000470238 SSH3Q8TE77 659 aa18.37■□□□□ 0.53
SCYL3-205ENST00000470238 IPO9Q96P70 1041 aaKnown RBP18.37■□□□□ 0.53
SCYL3-205ENST00000470238 CCDC9Q9Y3X0 531 aaKnown RBP18.37■□□□□ 0.53
SCYL3-205ENST00000470238 GRM8O00222 908 aa18.36■□□□□ 0.53
SCYL3-205ENST00000470238 UNC5CLQ8IV45 518 aa18.36■□□□□ 0.53
SCYL3-205ENST00000470238 UPF2Q9HAU5 1272 aaKnown RBP18.36■□□□□ 0.53
SCYL3-205ENST00000470238 UTYO14607 1347 aa18.36■□□□□ 0.53
SCYL3-205ENST00000470238 APBB1O00213 710 aa18.35■□□□□ 0.53
SCYL3-205ENST00000470238 PIP4K2AP48426 406 aaPredicted RBP18.35■□□□□ 0.53
SCYL3-205ENST00000470238 POLA2Q14181 598 aa18.35■□□□□ 0.53
SCYL3-205ENST00000470238 PPP1R42Q7Z4L9 355 aa18.35■□□□□ 0.53
SCYL3-205ENST00000470238 PLEKHM2Q8IWE5 1019 aa18.35■□□□□ 0.53
SCYL3-205ENST00000470238 PLBD2Q8NHP8 589 aa18.35■□□□□ 0.53
SCYL3-205ENST00000470238 ATG3Q9NT62 314 aa18.35■□□□□ 0.53
SCYL3-205ENST00000470238 ASAP1Q9ULH1 1129 aa18.35■□□□□ 0.53
SCYL3-205ENST00000470238 SPATA31A6Q5VVP1 1343 aa18.35■□□□□ 0.53
SCYL3-205ENST00000470238 NEURL1BA8MQ27 555 aa18.34■□□□□ 0.53
SCYL3-205ENST00000470238 NBPF26B4DH59 902 aa18.34■□□□□ 0.53
SCYL3-205ENST00000470238 IGKV5-2P06315 115 aa18.34■□□□□ 0.53
SCYL3-205ENST00000470238 NBPF14Q5TI25 921 aa18.34■□□□□ 0.53
SCYL3-205ENST00000470238 NBPF10Q6P3W6 841 aaKnown RBP18.34■□□□□ 0.53
SCYL3-205ENST00000470238 NBPF15Q8N660 670 aa18.34■□□□□ 0.53
SCYL3-205ENST00000470238 MYD88Q99836 296 aa18.34■□□□□ 0.53
SCYL3-205ENST00000470238 LRRCC1Q9C099 1032 aa18.34■□□□□ 0.53
SCYL3-205ENST00000470238 EXOC6BQ9Y2D4 811 aa18.34■□□□□ 0.53
SCYL3-205ENST00000470238 SRGAP3O43295 1099 aa18.33■□□□□ 0.53
SCYL3-205ENST00000470238 MTX1Q13505 466 aa18.33■□□□□ 0.53
SCYL3-205ENST00000470238 NGLY1Q96IV0 654 aa18.33■□□□□ 0.53
SCYL3-205ENST00000470238 ARFGEF2Q9Y6D5 1785 aa18.33■□□□□ 0.53
SCYL3-205ENST00000470238 SMARCA5O60264 1052 aaPredicted RBP18.33■□□□□ 0.52
SCYL3-205ENST00000470238 RAB11FIP3O75154 756 aa18.33■□□□□ 0.52
SCYL3-205ENST00000470238 STARD3NLO95772 234 aa18.33■□□□□ 0.52
SCYL3-205ENST00000470238 A1BGP04217 495 aa18.33■□□□□ 0.52
SCYL3-205ENST00000470238 DDRGK1Q96HY6 314 aa18.33■□□□□ 0.52
SCYL3-205ENST00000470238 C8orf37Q96NL8 207 aa18.33■□□□□ 0.52
SCYL3-205ENST00000470238 DOT1LQ8TEK3 1739 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms