RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 RNF41Q9H4P4 317 aaPredicted RBP7.2□□□□□ -1.26
CCDC144A-212ENST00000470068 DUOX2Q9NRD8 1548 aa7.2□□□□□ -1.26
CCDC144A-212ENST00000470068 GRIN2AQ12879 1464 aa7.2□□□□□ -1.26
CCDC144A-212ENST00000470068 RBM5P52756 815 aaKnown RBP eCLIP7.2□□□□□ -1.26
CCDC144A-212ENST00000470068 SLC4A10Q6U841 1118 aa7.2□□□□□ -1.26
CCDC144A-212ENST00000470068 CCDC12Q8WUD4 166 aaPredicted RBP7.2□□□□□ -1.26
CCDC144A-212ENST00000470068 IQCDQ96DY2 449 aa7.2□□□□□ -1.26
CCDC144A-212ENST00000470068 GJD4Q96KN9 370 aaPredicted RBP7.2□□□□□ -1.26
CCDC144A-212ENST00000470068 TTC21AQ8NDW8 1320 aa7.2□□□□□ -1.26
CCDC144A-212ENST00000470068 OFD1O75665 1012 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 PPP2R1AP30153 589 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 EPS15P42566 896 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 FKBP5Q13451 457 aaPredicted RBP7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 UNC5CLQ8IV45 518 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 ZFYVE9O95405 1425 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 PRDM2Q13029 1718 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 K7ELQ4 463 aaPredicted RBP7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 CCDC172P0C7W6 258 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 SYCP1Q15431 976 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 CLUL1Q15846 466 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 MPRIPQ6WCQ1 1025 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 STXBP4Q6ZWJ1 553 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 VPS37DQ86XT2 251 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 GLRX3O76003 335 aaKnown RBP7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 IFI16Q16666 785 aaKnown RBP7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 NFXL1Q6ZNB6 911 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 ZNF397Q8NF99 534 aaPredicted RBP7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 SRRTQ9BXP5 876 aaKnown RBP7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 CHMP3Q9Y3E7 222 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 APAF1O14727 1248 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 ECE1P42892 770 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 MVPQ14764 893 aaKnown RBP7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 CROCCP2Q86T23 111 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 VPS36Q86VN1 386 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 FAM114A1Q8IWE2 563 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 RILPL2Q969X0 211 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 DDX19AQ9NUU7 478 aaKnown RBP7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 RNF181Q9P0P0 153 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 ZNF652Q9Y2D9 606 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 RPRD2Q5VT52 1461 aaKnown RBP7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 ZMYM4Q5VZL5 1548 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 KIF24Q5T7B8 1368 aa7.19□□□□□ -1.26
CCDC144A-212ENST00000470068 WDR78Q5VTH9 848 aa7.18□□□□□ -1.26
CCDC144A-212ENST00000470068 ATF7IPQ6VMQ6 1270 aa7.18□□□□□ -1.26
CCDC144A-212ENST00000470068 PPFIBP1Q86W92 1011 aa7.18□□□□□ -1.26
CCDC144A-212ENST00000470068 DNAJC2Q99543 621 aaKnown RBP7.18□□□□□ -1.26
CCDC144A-212ENST00000470068 PTPN23Q9H3S7 1636 aa7.18□□□□□ -1.26
CCDC144A-212ENST00000470068 TCOF1Q13428 1488 aaKnown RBP7.18□□□□□ -1.26
CCDC144A-212ENST00000470068 A0A087WZG4 1122 aa7.18□□□□□ -1.26
CCDC144A-212ENST00000470068 TRAPPC8Q9Y2L5 1435 aa7.18□□□□□ -1.26
CCDC144A-212ENST00000470068 CLSTN1O94985 981 aa7.18□□□□□ -1.26
CCDC144A-212ENST00000470068 PRPHP41219 470 aa7.18□□□□□ -1.26
CCDC144A-212ENST00000470068 SDF4Q9BRK5 362 aa7.18□□□□□ -1.26
CCDC144A-212ENST00000470068 CCNL1Q9UK58 526 aaPredicted RBP7.18□□□□□ -1.26
CCDC144A-212ENST00000470068 TTF1Q15361 905 aaPredicted RBP7.18□□□□□ -1.26
CCDC144A-212ENST00000470068 NAIPQ13075 1403 aa7.18□□□□□ -1.26
CCDC144A-212ENST00000470068 CCDC148Q8NFR7 591 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 TTC12Q9H892 705 aaPredicted RBP7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 ABCC10Q5T3U5 1492 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 TSPOAP1O95153 1857 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 SPAG1Q07617 926 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 TNIP1Q15025 636 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 CT47A1Q5JQC4 288 aaPredicted RBP7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 RIC3Q7Z5B4 369 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 TMTC2Q8N394 836 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 CCDC112Q8NEF3 446 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 KIF1BPQ96EK5 621 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 CDK5RAP3Q96JB5 506 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 MKRN1Q9UHC7 482 aaKnown RBP7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 KIAA0754O94854 1291 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 NFE2L2Q16236 605 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 RTL1A6NKG5 1358 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 ZFYP08048 801 aaPredicted RBP7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 APLP1P51693 650 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 FILIP1Q7Z7B0 1213 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 PRIMPOLQ96LW4 560 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 PCMTD1Q96MG8 357 aaPredicted RBP7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 NAA15Q9BXJ9 866 aaKnown RBP7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 TOMM22Q9NS69 142 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 ANO10Q9NW15 660 aa7.17□□□□□ -1.26
CCDC144A-212ENST00000470068 KIF4AO95239 1232 aa7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 BRD2P25440 801 aaKnown RBP7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 USP37Q86T82 979 aa7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 DNAAF4Q8WXU2 420 aa7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 DPF3Q92784 378 aa7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 VTI1AQ96AJ9 217 aa7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 CGNQ9P2M7 1197 aaKnown RBP7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 RAD21O60216 631 aa7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 TPRNQ4KMQ1 711 aa7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 ZNF771Q7L3S4 317 aaPredicted RBP7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 TRAK2O60296 914 aa7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 AMPD3Q01432 767 aa7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 MLLT1Q03111 559 aaPredicted RBP7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 LARP1Q6PKG0 1096 aaKnown RBP7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 CCDC91Q7Z6B0 441 aa7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 LRRC45Q96CN5 670 aa7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 TAOK3Q9H2K8 898 aa7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 ZSCAN16Q9H4T2 348 aaPredicted RBP7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 SOGA3Q5TF21 947 aa7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 OTUD7BQ6GQQ9 843 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms