RNA–Protein interactions for RNA: ENST00000469672.5

ABCD4-205, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-205ENST00000469672 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
ABCD4-205ENST00000469672 PXDNLA1KZ92 1463 aa17.24■□□□□ 0.35
ABCD4-205ENST00000469672 KIF13BQ9NQT8 1826 aa17.24■□□□□ 0.35
ABCD4-205ENST00000469672 BTBD11A6QL63 1104 aa17.23■□□□□ 0.35
ABCD4-205ENST00000469672 EIF5P55010 431 aaKnown RBP17.23■□□□□ 0.35
ABCD4-205ENST00000469672 DDR1Q08345 913 aa17.23■□□□□ 0.35
ABCD4-205ENST00000469672 WWC3Q9ULE0 1092 aa17.23■□□□□ 0.35
ABCD4-205ENST00000469672 POLRMTO00411 1230 aaKnown RBP17.22■□□□□ 0.35
ABCD4-205ENST00000469672 DPEP1P16444 411 aa17.22■□□□□ 0.35
ABCD4-205ENST00000469672 CANXP27824 592 aaKnown RBP17.22■□□□□ 0.35
ABCD4-205ENST00000469672 COL15A1P39059 1388 aa17.22■□□□□ 0.35
ABCD4-205ENST00000469672 UBR2Q8IWV8 1755 aa17.22■□□□□ 0.35
ABCD4-205ENST00000469672 A0A087WZG4 1122 aa17.21■□□□□ 0.35
ABCD4-205ENST00000469672 KCNA3P22001 575 aa17.21■□□□□ 0.35
ABCD4-205ENST00000469672 BCL2L12Q9HB09 334 aa17.21■□□□□ 0.35
ABCD4-205ENST00000469672 KCNQ3O43525 872 aa17.2■□□□□ 0.34
ABCD4-205ENST00000469672 NFIXQ14938 502 aa17.2■□□□□ 0.34
ABCD4-205ENST00000469672 MCM10Q7L590 875 aa17.2■□□□□ 0.34
ABCD4-205ENST00000469672 BCS1LQ9Y276 419 aa17.2■□□□□ 0.34
ABCD4-205ENST00000469672 NEFMP07197 916 aa17.19■□□□□ 0.34
ABCD4-205ENST00000469672 IL6STP40189 918 aaPredicted RBP17.19■□□□□ 0.34
ABCD4-205ENST00000469672 C1QTNF8P60827 252 aa17.19■□□□□ 0.34
ABCD4-205ENST00000469672 PIM2Q9P1W9 311 aa17.19■□□□□ 0.34
ABCD4-205ENST00000469672 SIPA1L3O60292 1781 aaPredicted RBP17.19■□□□□ 0.34
ABCD4-205ENST00000469672 RALBP1Q15311 655 aa17.18■□□□□ 0.34
ABCD4-205ENST00000469672 PLEKHF1Q96S99 279 aa17.18■□□□□ 0.34
ABCD4-205ENST00000469672 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
ABCD4-205ENST00000469672 KIAA1551Q9HCM1 1747 aa17.18■□□□□ 0.34
ABCD4-205ENST00000469672 ADCY9O60503 1353 aa17.17■□□□□ 0.34
ABCD4-205ENST00000469672 GIGYF1O75420 1035 aaPredicted RBP17.17■□□□□ 0.34
ABCD4-205ENST00000469672 A1BGP04217 495 aa17.17■□□□□ 0.34
ABCD4-205ENST00000469672 DCTN1Q14203 1278 aa17.17■□□□□ 0.34
ABCD4-205ENST00000469672 TAF7Q15545 349 aaPredicted RBP17.17■□□□□ 0.34
ABCD4-205ENST00000469672 ATP10DQ9P241 1426 aa17.16■□□□□ 0.34
ABCD4-205ENST00000469672 N4BP2Q86UW6 1770 aaPredicted RBP17.16■□□□□ 0.34
ABCD4-205ENST00000469672 SERPINB2P05120 415 aa17.16■□□□□ 0.34
ABCD4-205ENST00000469672 SNRPA1P09661 255 aaKnown RBP17.16■□□□□ 0.34
ABCD4-205ENST00000469672 USP16Q9Y5T5 823 aa17.16■□□□□ 0.34
ABCD4-205ENST00000469672 DALRD3Q5D0E6 543 aaKnown RBP17.15■□□□□ 0.34
ABCD4-205ENST00000469672 ARHGAP27Q6ZUM4 889 aa17.15■□□□□ 0.34
ABCD4-205ENST00000469672 NPM2Q86SE8 214 aaKnown RBP17.15■□□□□ 0.34
ABCD4-205ENST00000469672 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
ABCD4-205ENST00000469672 GPBP1L1Q9HC44 474 aaPredicted RBP17.14■□□□□ 0.33
ABCD4-205ENST00000469672 TBC1D2BQ9UPU7 963 aa17.14■□□□□ 0.33
ABCD4-205ENST00000469672 CHRNA5P30532 468 aa17.13■□□□□ 0.33
ABCD4-205ENST00000469672 NFE2L2Q16236 605 aa17.13■□□□□ 0.33
ABCD4-205ENST00000469672 TBC1D9BQ66K14 1250 aa17.12■□□□□ 0.33
ABCD4-205ENST00000469672 PNISRQ8TF01 805 aaKnown RBP17.12■□□□□ 0.33
ABCD4-205ENST00000469672 ZNF330Q9Y3S2 320 aaPredicted RBP17.12■□□□□ 0.33
ABCD4-205ENST00000469672 PRAMEF22A3QJZ6 481 aa17.11■□□□□ 0.33
ABCD4-205ENST00000469672 CAMTA2O94983 1202 aa17.11■□□□□ 0.33
ABCD4-205ENST00000469672 BICDL1Q6ZP65 573 aa17.11■□□□□ 0.33
ABCD4-205ENST00000469672 BRCA1P38398 1863 aaKnown RBP17.11■□□□□ 0.33
ABCD4-205ENST00000469672 DZIP3Q86Y13 1208 aaKnown RBP17.1■□□□□ 0.33
ABCD4-205ENST00000469672 MIS18AQ9NYP9 233 aa17.1■□□□□ 0.33
ABCD4-205ENST00000469672 NRXN2Q9P2S2 1712 aa17.1■□□□□ 0.33
ABCD4-205ENST00000469672 CLEC4GQ6UXB4 293 aa17.09■□□□□ 0.33
ABCD4-205ENST00000469672 SETDB2Q96T68 719 aa17.09■□□□□ 0.33
ABCD4-205ENST00000469672 BRIP1Q9BX63 1249 aa17.09■□□□□ 0.33
ABCD4-205ENST00000469672 PDZRN3Q9UPQ7 1066 aa17.09■□□□□ 0.33
ABCD4-205ENST00000469672 MAPK8IP3Q9UPT6 1336 aa17.09■□□□□ 0.33
ABCD4-205ENST00000469672 AFDNP55196 1824 aaKnown RBP17.08■□□□□ 0.33
ABCD4-205ENST00000469672 CARMIL3Q8ND23 1372 aa17.08■□□□□ 0.32
ABCD4-205ENST00000469672 H0YIN7 160 aa17.08■□□□□ 0.32
ABCD4-205ENST00000469672 RGL2O15211 777 aa17.08■□□□□ 0.32
ABCD4-205ENST00000469672 ZNF526Q8TF50 670 aaPredicted RBP17.08■□□□□ 0.32
ABCD4-205ENST00000469672 MYBBP1AQ9BQG0 1328 aaKnown RBP17.07■□□□□ 0.32
ABCD4-205ENST00000469672 NBPF26B4DH59 902 aa17.07■□□□□ 0.32
ABCD4-205ENST00000469672 PIP4K2AP48426 406 aaPredicted RBP17.07■□□□□ 0.32
ABCD4-205ENST00000469672 NBPF10Q6P3W6 841 aaKnown RBP17.07■□□□□ 0.32
ABCD4-205ENST00000469672 C2CD5Q86YS7 1000 aa17.07■□□□□ 0.32
ABCD4-205ENST00000469672 NBPF15Q8N660 670 aa17.07■□□□□ 0.32
ABCD4-205ENST00000469672 TTLL6Q8N841 843 aa17.07■□□□□ 0.32
ABCD4-205ENST00000469672 ARFGEF1Q9Y6D6 1849 aa17.07■□□□□ 0.32
ABCD4-205ENST00000469672 PDE6BP35913 854 aa17.06■□□□□ 0.32
ABCD4-205ENST00000469672 EIF4A1P60842 406 aaKnown RBP17.06■□□□□ 0.32
ABCD4-205ENST00000469672 C9orf131Q5VYM1 1079 aa17.06■□□□□ 0.32
ABCD4-205ENST00000469672 PRR5LQ6MZQ0 368 aa17.06■□□□□ 0.32
ABCD4-205ENST00000469672 SENP3-EIF4A1A0A087X0R7 540 aa17.05■□□□□ 0.32
ABCD4-205ENST00000469672 THUMPD2Q9BTF0 503 aaKnown RBP17.05■□□□□ 0.32
ABCD4-205ENST00000469672 ZNF652Q9Y2D9 606 aa17.05■□□□□ 0.32
ABCD4-205ENST00000469672 RIPK4P57078 832 aa17.04■□□□□ 0.32
ABCD4-205ENST00000469672 CNBD1Q8NA66 436 aa17.04■□□□□ 0.32
ABCD4-205ENST00000469672 DLG5Q8TDM6 1919 aa17.04■□□□□ 0.32
ABCD4-205ENST00000469672 KIF3CO14782 793 aa17.03■□□□□ 0.32
ABCD4-205ENST00000469672 TMPOP42166 694 aaKnown RBP17.03■□□□□ 0.32
ABCD4-205ENST00000469672 BABAM1Q9NWV8 329 aa17.03■□□□□ 0.32
ABCD4-205ENST00000469672 SCN7AQ01118 1682 aa17.03■□□□□ 0.32
ABCD4-205ENST00000469672 RNF181Q9P0P0 153 aa17.02■□□□□ 0.32
ABCD4-205ENST00000469672 NPHP1O15259 732 aa17.01■□□□□ 0.31
ABCD4-205ENST00000469672 ST5P78524 1137 aa17.01■□□□□ 0.31
ABCD4-205ENST00000469672 LMOD3Q0VAK6 560 aa17.01■□□□□ 0.31
ABCD4-205ENST00000469672 CCDC24Q8N4L8 307 aa17.01■□□□□ 0.31
ABCD4-205ENST00000469672 ZNF622Q969S3 477 aaKnown RBP eCLIP17.01■□□□□ 0.31
ABCD4-205ENST00000469672 ERVV-1B6SEH8 477 aa17■□□□□ 0.31
ABCD4-205ENST00000469672 TPTE2Q6XPS3 522 aa17■□□□□ 0.31
ABCD4-205ENST00000469672 NBPF5PQ86XG9 351 aaPredicted RBP17■□□□□ 0.31
ABCD4-205ENST00000469672 PRKRIP1Q9H875 184 aaPredicted RBP17■□□□□ 0.31
ABCD4-205ENST00000469672 TSPYL4Q9UJ04 414 aa17■□□□□ 0.31
ABCD4-205ENST00000469672 NIP7Q9Y221 180 aaKnown RBP eCLIP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms