RNA–Protein interactions for RNA: ENST00000468922.1

SYN3-210, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-210ENST00000468922 U2SURPO15042 1029 aaKnown RBP11.35□□□□□ -0.59
SYN3-210ENST00000468922 DDX10Q13206 875 aaKnown RBP11.35□□□□□ -0.59
SYN3-210ENST00000468922 MTHFSDQ2M296 383 aaKnown RBP11.35□□□□□ -0.59
SYN3-210ENST00000468922 RC3H1Q5TC82 1133 aaKnown RBP11.35□□□□□ -0.59
SYN3-210ENST00000468922 AIDAQ96BJ3 306 aa11.35□□□□□ -0.59
SYN3-210ENST00000468922 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
SYN3-210ENST00000468922 NUDCQ9Y266 331 aa11.35□□□□□ -0.59
SYN3-210ENST00000468922 ZNF831Q5JPB2 1677 aa11.35□□□□□ -0.59
SYN3-210ENST00000468922 KIAA1551Q9HCM1 1747 aa11.35□□□□□ -0.59
SYN3-210ENST00000468922 RPS6KA4O75676 772 aa11.34□□□□□ -0.59
SYN3-210ENST00000468922 LMNB1P20700 586 aa11.34□□□□□ -0.59
SYN3-210ENST00000468922 CHRNA5P30532 468 aa11.34□□□□□ -0.59
SYN3-210ENST00000468922 CTCFP49711 727 aaPredicted RBP11.34□□□□□ -0.59
SYN3-210ENST00000468922 CABP4P57796 275 aa11.34□□□□□ -0.59
SYN3-210ENST00000468922 RASSF7Q02833 373 aa11.34□□□□□ -0.59
SYN3-210ENST00000468922 RSPH6AQ9H0K4 717 aa11.34□□□□□ -0.59
SYN3-210ENST00000468922 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
SYN3-210ENST00000468922 KIF13BQ9NQT8 1826 aa11.34□□□□□ -0.59
SYN3-210ENST00000468922 MRC1P22897 1456 aa11.33□□□□□ -0.6
SYN3-210ENST00000468922 RNMTO43148 476 aaKnown RBP11.33□□□□□ -0.6
SYN3-210ENST00000468922 RBM42Q9BTD8 480 aaKnown RBP11.33□□□□□ -0.6
SYN3-210ENST00000468922 TNRC6CQ9HCJ0 1690 aaKnown RBP11.33□□□□□ -0.6
SYN3-210ENST00000468922 RALBP1Q15311 655 aa11.32□□□□□ -0.6
SYN3-210ENST00000468922 DPY19L2Q6NUT2 758 aa11.32□□□□□ -0.6
SYN3-210ENST00000468922 NFATC2IPQ8NCF5 419 aa11.32□□□□□ -0.6
SYN3-210ENST00000468922 SLC4A9Q96Q91 983 aa11.32□□□□□ -0.6
SYN3-210ENST00000468922 LGR6Q9HBX8 967 aa11.32□□□□□ -0.6
SYN3-210ENST00000468922 VIRMAQ69YN4 1812 aaKnown RBP11.32□□□□□ -0.6
SYN3-210ENST00000468922 PRKAR2BP31323 418 aa11.31□□□□□ -0.6
SYN3-210ENST00000468922 GAS2L2Q8NHY3 880 aa11.31□□□□□ -0.6
SYN3-210ENST00000468922 ABHD8Q96I13 439 aa11.31□□□□□ -0.6
SYN3-210ENST00000468922 PHACTR3Q96KR7 559 aa11.31□□□□□ -0.6
SYN3-210ENST00000468922 SLC52A2Q9HAB3 445 aa11.31□□□□□ -0.6
SYN3-210ENST00000468922 CNTNAP4Q9C0A0 1308 aa11.31□□□□□ -0.6
SYN3-210ENST00000468922 C4AP0C0L4 1744 aa11.3□□□□□ -0.6
SYN3-210ENST00000468922 POTECB2RU33 542 aa11.3□□□□□ -0.6
SYN3-210ENST00000468922 U2AF1L5P0DN76 240 aaPredicted RBP11.3□□□□□ -0.6
SYN3-210ENST00000468922 LBX1P52954 281 aa11.3□□□□□ -0.6
SYN3-210ENST00000468922 U2AF1Q01081 240 aaKnown RBP eCLIP11.3□□□□□ -0.6
SYN3-210ENST00000468922 MLLT1Q03111 559 aaPredicted RBP11.3□□□□□ -0.6
SYN3-210ENST00000468922 FKBP8Q14318 412 aa11.3□□□□□ -0.6
SYN3-210ENST00000468922 CHADLQ6NUI6 762 aa11.3□□□□□ -0.6
SYN3-210ENST00000468922 GNAT3A8MTJ3 354 aa11.29□□□□□ -0.6
SYN3-210ENST00000468922 DDR1Q08345 913 aa11.29□□□□□ -0.6
SYN3-210ENST00000468922 IL17REQ8NFR9 667 aa11.29□□□□□ -0.6
SYN3-210ENST00000468922 SRP68Q9UHB9 627 aaKnown RBP11.29□□□□□ -0.6
SYN3-210ENST00000468922 CNTNAP1P78357 1384 aa11.28□□□□□ -0.6
SYN3-210ENST00000468922 CEMIPQ8WUJ3 1361 aa11.28□□□□□ -0.6
SYN3-210ENST00000468922 ARFGEF1Q9Y6D6 1849 aa11.28□□□□□ -0.6
SYN3-210ENST00000468922 COL5A3P25940 1745 aaPredicted RBP11.28□□□□□ -0.6
SYN3-210ENST00000468922 SIPA1L3O60292 1781 aaPredicted RBP11.27□□□□□ -0.61
SYN3-210ENST00000468922 POLRMTO00411 1230 aaKnown RBP11.27□□□□□ -0.61
SYN3-210ENST00000468922 TM4SF1P30408 202 aa11.27□□□□□ -0.61
SYN3-210ENST00000468922 VEGFBP49765 207 aa11.27□□□□□ -0.61
SYN3-210ENST00000468922 TTLL6Q8N841 843 aa11.27□□□□□ -0.61
SYN3-210ENST00000468922 WBP1LQ9NX94 342 aa11.27□□□□□ -0.61
SYN3-210ENST00000468922 MYBBP1AQ9BQG0 1328 aaKnown RBP11.27□□□□□ -0.61
SYN3-210ENST00000468922 USP42Q9H9J4 1324 aaKnown RBP11.27□□□□□ -0.61
SYN3-210ENST00000468922 TJP1Q07157 1748 aa11.26□□□□□ -0.61
SYN3-210ENST00000468922 BRCA1P38398 1863 aaKnown RBP11.26□□□□□ -0.61
SYN3-210ENST00000468922 CCDC85CA6NKD9 419 aa11.26□□□□□ -0.61
SYN3-210ENST00000468922 HTATSF1O43719 755 aaKnown RBP11.26□□□□□ -0.61
SYN3-210ENST00000468922 PTCD1O75127 700 aaKnown RBP11.26□□□□□ -0.61
SYN3-210ENST00000468922 RGS19P49795 217 aa11.26□□□□□ -0.61
SYN3-210ENST00000468922 PLEKHF1Q96S99 279 aa11.26□□□□□ -0.61
SYN3-210ENST00000468922 PRKRIP1Q9H875 184 aaPredicted RBP11.26□□□□□ -0.61
SYN3-210ENST00000468922 MYH14Q7Z406 1995 aaKnown RBP11.26□□□□□ -0.61
SYN3-210ENST00000468922 UBR2Q8IWV8 1755 aa11.26□□□□□ -0.61
SYN3-210ENST00000468922 CRKLP46109 303 aaKnown RBP11.25□□□□□ -0.61
SYN3-210ENST00000468922 SLC39A6Q13433 755 aa11.25□□□□□ -0.61
SYN3-210ENST00000468922 ERFEQ4G0M1 354 aa11.25□□□□□ -0.61
SYN3-210ENST00000468922 TMEM88BA6NKF7 163 aa11.24□□□□□ -0.61
SYN3-210ENST00000468922 NFKBIEO00221 500 aa11.24□□□□□ -0.61
SYN3-210ENST00000468922 ZPR1O75312 459 aa11.24□□□□□ -0.61
SYN3-210ENST00000468922 POTEIP0CG38 1075 aa11.24□□□□□ -0.61
SYN3-210ENST00000468922 POTEJP0CG39 1038 aa11.24□□□□□ -0.61
SYN3-210ENST00000468922 HSPA8P11142 646 aaKnown RBP11.24□□□□□ -0.61
SYN3-210ENST00000468922 TEFQ10587 303 aa11.24□□□□□ -0.61
SYN3-210ENST00000468922 VSIG10Q8N0Z9 540 aa11.24□□□□□ -0.61
SYN3-210ENST00000468922 ZNF316A6NFI3 1004 aaPredicted RBP11.23□□□□□ -0.61
SYN3-210ENST00000468922 H0YIN7 160 aa11.23□□□□□ -0.61
SYN3-210ENST00000468922 MAP2K1Q02750 393 aaPredicted RBP11.23□□□□□ -0.61
SYN3-210ENST00000468922 USPL1Q5W0Q7 1092 aa11.23□□□□□ -0.61
SYN3-210ENST00000468922 C2CD5Q86YS7 1000 aa11.23□□□□□ -0.61
SYN3-210ENST00000468922 PNNQ9H307 717 aaKnown RBP11.23□□□□□ -0.61
SYN3-210ENST00000468922 DDNO94850 711 aaPredicted RBP11.22□□□□□ -0.61
SYN3-210ENST00000468922 SBF1O95248 1867 aa11.22□□□□□ -0.61
SYN3-210ENST00000468922 CYP19A1P11511 503 aaPredicted RBP11.22□□□□□ -0.61
SYN3-210ENST00000468922 INTS5Q6P9B9 1019 aaKnown RBP11.22□□□□□ -0.61
SYN3-210ENST00000468922 ZNF790Q6PG37 636 aa11.22□□□□□ -0.61
SYN3-210ENST00000468922 LDHDQ86WU2 507 aa11.22□□□□□ -0.61
SYN3-210ENST00000468922 DNAJC10Q8IXB1 793 aa11.22□□□□□ -0.61
SYN3-210ENST00000468922 DLG5Q8TDM6 1919 aa11.22□□□□□ -0.61
SYN3-210ENST00000468922 PASKQ96RG2 1323 aa11.22□□□□□ -0.61
SYN3-210ENST00000468922 HEG1Q9ULI3 1381 aa11.21□□□□□ -0.61
SYN3-210ENST00000468922 IQCA1LA6NCM1 817 aa11.21□□□□□ -0.61
SYN3-210ENST00000468922 NEFMP07197 916 aa11.21□□□□□ -0.61
SYN3-210ENST00000468922 NFE2L2Q16236 605 aa11.21□□□□□ -0.61
SYN3-210ENST00000468922 DEFB115Q30KQ5 88 aa11.21□□□□□ -0.61
SYN3-210ENST00000468922 TTC5Q8N0Z6 440 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms