RNA–Protein interactions for RNA: ENST00000468727.5

ARHGEF3-206, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-206ENST00000468727 RRAGCQ9HB90 399 aa17.16■□□□□ 0.34
ARHGEF3-206ENST00000468727 CARMIL3Q8ND23 1372 aa17.15■□□□□ 0.34
ARHGEF3-206ENST00000468727 TM4SF1P30408 202 aa17.15■□□□□ 0.34
ARHGEF3-206ENST00000468727 KLRG1Q96E93 195 aa17.15■□□□□ 0.34
ARHGEF3-206ENST00000468727 SOS1Q07889 1333 aaPredicted RBP17.15■□□□□ 0.34
ARHGEF3-206ENST00000468727 HSPA5P11021 654 aaKnown RBP17.14■□□□□ 0.33
ARHGEF3-206ENST00000468727 IL13P35225 146 aa17.14■□□□□ 0.33
ARHGEF3-206ENST00000468727 C16orf71Q8IYS4 520 aaPredicted RBP17.14■□□□□ 0.33
ARHGEF3-206ENST00000468727 LGR6Q9HBX8 967 aa17.14■□□□□ 0.33
ARHGEF3-206ENST00000468727 ARFGEF2Q9Y6D5 1785 aa17.13■□□□□ 0.33
ARHGEF3-206ENST00000468727 SLC39A6Q13433 755 aa17.13■□□□□ 0.33
ARHGEF3-206ENST00000468727 COL13A1Q5TAT6 717 aaPredicted RBP17.13■□□□□ 0.33
ARHGEF3-206ENST00000468727 MORC1Q86VD1 984 aa17.13■□□□□ 0.33
ARHGEF3-206ENST00000468727 BCL2L12Q9HB09 334 aa17.13■□□□□ 0.33
ARHGEF3-206ENST00000468727 KDM2BQ8NHM5 1336 aa17.13■□□□□ 0.33
ARHGEF3-206ENST00000468727 COL15A1P39059 1388 aa17.13■□□□□ 0.33
ARHGEF3-206ENST00000468727 TRIM26Q12899 539 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF3-206ENST00000468727 NFIXQ14938 502 aa17.12■□□□□ 0.33
ARHGEF3-206ENST00000468727 JMYQ8N9B5 988 aa17.12■□□□□ 0.33
ARHGEF3-206ENST00000468727 ZBTB1Q9Y2K1 713 aa17.12■□□□□ 0.33
ARHGEF3-206ENST00000468727 BCORQ6W2J9 1755 aa17.12■□□□□ 0.33
ARHGEF3-206ENST00000468727 CYP19A1P11511 503 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF3-206ENST00000468727 FSTL1Q12841 308 aa17.11■□□□□ 0.33
ARHGEF3-206ENST00000468727 SLC52A2Q9HAB3 445 aa17.11■□□□□ 0.33
ARHGEF3-206ENST00000468727 SLX4Q8IY92 1834 aa17.1■□□□□ 0.33
ARHGEF3-206ENST00000468727 AKAP4Q5JQC9 854 aa17.1■□□□□ 0.33
ARHGEF3-206ENST00000468727 ZPR1O75312 459 aa17.09■□□□□ 0.33
ARHGEF3-206ENST00000468727 TIMELESSQ9UNS1 1208 aa17.09■□□□□ 0.33
ARHGEF3-206ENST00000468727 RNMTO43148 476 aaKnown RBP17.08■□□□□ 0.32
ARHGEF3-206ENST00000468727 HMOX1P09601 288 aa17.08■□□□□ 0.32
ARHGEF3-206ENST00000468727 NARFQ9UHQ1 456 aa17.08■□□□□ 0.32
ARHGEF3-206ENST00000468727 EIF4G2P78344 907 aaKnown RBP eCLIP17.07■□□□□ 0.32
ARHGEF3-206ENST00000468727 NFKBIEO00221 500 aa17.06■□□□□ 0.32
ARHGEF3-206ENST00000468727 SERPINB2P05120 415 aa17.06■□□□□ 0.32
ARHGEF3-206ENST00000468727 SMC1BQ8NDV3 1235 aa17.06■□□□□ 0.32
ARHGEF3-206ENST00000468727 CAPN15O75808 1086 aa17.05■□□□□ 0.32
ARHGEF3-206ENST00000468727 MTHFSDQ2M296 383 aaKnown RBP17.05■□□□□ 0.32
ARHGEF3-206ENST00000468727 AMER1Q5JTC6 1135 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF3-206ENST00000468727 ZC3H4Q9UPT8 1303 aaKnown RBP17.04■□□□□ 0.32
ARHGEF3-206ENST00000468727 POTECB2RU33 542 aa17.04■□□□□ 0.32
ARHGEF3-206ENST00000468727 LMNB1P20700 586 aa17.04■□□□□ 0.32
ARHGEF3-206ENST00000468727 CANXP27824 592 aaKnown RBP17.04■□□□□ 0.32
ARHGEF3-206ENST00000468727 C2CD5Q86YS7 1000 aa17.04■□□□□ 0.32
ARHGEF3-206ENST00000468727 COL3A1P02461 1466 aaPredicted RBP17.04■□□□□ 0.32
ARHGEF3-206ENST00000468727 GLTPD2A6NH11 291 aa17.03■□□□□ 0.32
ARHGEF3-206ENST00000468727 BICDL1Q6ZP65 573 aa17.03■□□□□ 0.32
ARHGEF3-206ENST00000468727 CCDC24Q8N4L8 307 aa17.03■□□□□ 0.32
ARHGEF3-206ENST00000468727 PCGF6Q9BYE7 350 aa17.03■□□□□ 0.32
ARHGEF3-206ENST00000468727 TTLL6Q8N841 843 aa17.02■□□□□ 0.32
ARHGEF3-206ENST00000468727 KNSTRNQ9Y448 316 aa17.02■□□□□ 0.32
ARHGEF3-206ENST00000468727 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
ARHGEF3-206ENST00000468727 VEGFAP15692 232 aaPredicted RBP17■□□□□ 0.31
ARHGEF3-206ENST00000468727 EIF5P55010 431 aaKnown RBP17■□□□□ 0.31
ARHGEF3-206ENST00000468727 TBC1D9BQ66K14 1250 aa17■□□□□ 0.31
ARHGEF3-206ENST00000468727 CLSPNQ9HAW4 1339 aa16.99■□□□□ 0.31
ARHGEF3-206ENST00000468727 SCN4AP35499 1836 aa16.99■□□□□ 0.31
ARHGEF3-206ENST00000468727 HSPA1AP0DMV8 641 aaKnown RBP16.99■□□□□ 0.31
ARHGEF3-206ENST00000468727 HSPA1BP0DMV9 641 aaKnown RBP16.99■□□□□ 0.31
ARHGEF3-206ENST00000468727 VSIG10Q8N0Z9 540 aa16.99■□□□□ 0.31
ARHGEF3-206ENST00000468727 H0YIN7 160 aa16.98■□□□□ 0.31
ARHGEF3-206ENST00000468727 PRR5LQ6MZQ0 368 aa16.98■□□□□ 0.31
ARHGEF3-206ENST00000468727 TNS4Q8IZW8 715 aa16.98■□□□□ 0.31
ARHGEF3-206ENST00000468727 ZNF496Q96IT1 587 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF3-206ENST00000468727 C21orf2O43822 256 aa16.97■□□□□ 0.31
ARHGEF3-206ENST00000468727 POTEIP0CG38 1075 aa16.97■□□□□ 0.31
ARHGEF3-206ENST00000468727 POTEJP0CG39 1038 aa16.97■□□□□ 0.31
ARHGEF3-206ENST00000468727 ZNF622Q969S3 477 aaKnown RBP eCLIP16.97■□□□□ 0.31
ARHGEF3-206ENST00000468727 HEG1Q9ULI3 1381 aa16.97■□□□□ 0.31
ARHGEF3-206ENST00000468727 KIF7Q2M1P5 1343 aa16.96■□□□□ 0.31
ARHGEF3-206ENST00000468727 TBC1D2BQ9UPU7 963 aa16.96■□□□□ 0.31
ARHGEF3-206ENST00000468727 ZNF330Q9Y3S2 320 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF3-206ENST00000468727 DIAPH1O60610 1272 aaKnown RBP16.95■□□□□ 0.3
ARHGEF3-206ENST00000468727 IL17REQ8NFR9 667 aa16.95■□□□□ 0.3
ARHGEF3-206ENST00000468727 ADAMTSL1Q8N6G6 1762 aa16.94■□□□□ 0.3
ARHGEF3-206ENST00000468727 DLG5Q8TDM6 1919 aa16.94■□□□□ 0.3
ARHGEF3-206ENST00000468727 CC2D1BQ5T0F9 858 aaKnown RBP16.94■□□□□ 0.3
ARHGEF3-206ENST00000468727 TTC5Q8N0Z6 440 aa16.94■□□□□ 0.3
ARHGEF3-206ENST00000468727 LAMB4A4D0S4 1761 aa16.93■□□□□ 0.3
ARHGEF3-206ENST00000468727 PER1O15534 1290 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF3-206ENST00000468727 KCNQ3O43525 872 aa16.93■□□□□ 0.3
ARHGEF3-206ENST00000468727 STARD3NLO95772 234 aa16.93■□□□□ 0.3
ARHGEF3-206ENST00000468727 ERFEQ4G0M1 354 aa16.93■□□□□ 0.3
ARHGEF3-206ENST00000468727 ZNF790Q6PG37 636 aa16.93■□□□□ 0.3
ARHGEF3-206ENST00000468727 BRIP1Q9BX63 1249 aa16.93■□□□□ 0.3
ARHGEF3-206ENST00000468727 NUP98P52948 1817 aa16.93■□□□□ 0.3
ARHGEF3-206ENST00000468727 A0A087WZG4 1122 aa16.92■□□□□ 0.3
ARHGEF3-206ENST00000468727 CAMTA2O94983 1202 aa16.92■□□□□ 0.3
ARHGEF3-206ENST00000468727 A1BGP04217 495 aa16.92■□□□□ 0.3
ARHGEF3-206ENST00000468727 PIP4K2AP48426 406 aaPredicted RBP16.92■□□□□ 0.3
ARHGEF3-206ENST00000468727 DDNO94850 711 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF3-206ENST00000468727 PDE6BP35913 854 aa16.91■□□□□ 0.3
ARHGEF3-206ENST00000468727 CNGB1Q14028 1251 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF3-206ENST00000468727 MKRN1Q9UHC7 482 aaKnown RBP16.91■□□□□ 0.3
ARHGEF3-206ENST00000468727 IL6STP40189 918 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF3-206ENST00000468727 TEFQ10587 303 aa16.9■□□□□ 0.3
ARHGEF3-206ENST00000468727 PRPF40BQ6NWY9 871 aaKnown RBP16.9■□□□□ 0.3
ARHGEF3-206ENST00000468727 TAOK3Q9H2K8 898 aa16.9■□□□□ 0.3
ARHGEF3-206ENST00000468727 LTBP3Q9NS15 1303 aa16.9■□□□□ 0.3
ARHGEF3-206ENST00000468727 PRAMEF22A3QJZ6 481 aa16.89■□□□□ 0.29
ARHGEF3-206ENST00000468727 U2SURPO15042 1029 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms