RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 CCDC183Q5T5S1 534 aa16.12■□□□□ 0.17
SHANK2-214ENST00000468619 DCTPP1Q9H773 170 aa16.12■□□□□ 0.17
SHANK2-214ENST00000468619 THUMPD2Q9BTF0 503 aaKnown RBP16.11■□□□□ 0.17
SHANK2-214ENST00000468619 TTC21BQ7Z4L5 1316 aa16.11■□□□□ 0.17
SHANK2-214ENST00000468619 MAP2P11137 1827 aaKnown RBP16.11■□□□□ 0.17
SHANK2-214ENST00000468619 ERC2O15083 957 aa16.11■□□□□ 0.17
SHANK2-214ENST00000468619 VAMP4O75379 141 aa16.11■□□□□ 0.17
SHANK2-214ENST00000468619 ERICH4A6NGS2 130 aa16.1■□□□□ 0.17
SHANK2-214ENST00000468619 GIMAP6Q6P9H5 292 aa16.1■□□□□ 0.17
SHANK2-214ENST00000468619 C16orf45Q96MC5 204 aaPredicted RBP16.1■□□□□ 0.17
SHANK2-214ENST00000468619 DDX41Q9UJV9 622 aaKnown RBP16.1■□□□□ 0.17
SHANK2-214ENST00000468619 MX1P20591 662 aa16.1■□□□□ 0.17
SHANK2-214ENST00000468619 CNPY2Q9Y2B0 182 aa16.09■□□□□ 0.17
SHANK2-214ENST00000468619 TMEM94Q12767 1356 aa16.09■□□□□ 0.17
SHANK2-214ENST00000468619 TERF2Q15554 542 aa16.09■□□□□ 0.17
SHANK2-214ENST00000468619 CUL4AQ13619 759 aa16.09■□□□□ 0.17
SHANK2-214ENST00000468619 ESCO1Q5FWF5 840 aa16.09■□□□□ 0.17
SHANK2-214ENST00000468619 COG3Q96JB2 828 aa16.09■□□□□ 0.17
SHANK2-214ENST00000468619 PTGS1P23219 599 aa16.08■□□□□ 0.16
SHANK2-214ENST00000468619 ARHGAP45Q92619 1136 aa16.08■□□□□ 0.16
SHANK2-214ENST00000468619 PALD1Q9ULE6 856 aa16.08■□□□□ 0.16
SHANK2-214ENST00000468619 PHF8Q9UPP1 1060 aa16.08■□□□□ 0.16
SHANK2-214ENST00000468619 ABCC4O15439 1325 aa16.08■□□□□ 0.16
SHANK2-214ENST00000468619 CCDC66A2RUB6 948 aa16.07■□□□□ 0.16
SHANK2-214ENST00000468619 BRPF1P55201 1214 aaPredicted RBP16.07■□□□□ 0.16
SHANK2-214ENST00000468619 UPF3BQ9BZI7 483 aaKnown RBP16.07■□□□□ 0.16
SHANK2-214ENST00000468619 SSH2Q76I76 1423 aa16.07■□□□□ 0.16
SHANK2-214ENST00000468619 TCHHQ07283 1943 aa16.07■□□□□ 0.16
SHANK2-214ENST00000468619 TIGD1Q96MW7 591 aa16.07■□□□□ 0.16
SHANK2-214ENST00000468619 SRCIN1Q9C0H9 1055 aa16.07■□□□□ 0.16
SHANK2-214ENST00000468619 KIF18AQ8NI77 898 aa16.06■□□□□ 0.16
SHANK2-214ENST00000468619 ORAI2Q96SN7 254 aa16.06■□□□□ 0.16
SHANK2-214ENST00000468619 SOX12O15370 315 aa16.06■□□□□ 0.16
SHANK2-214ENST00000468619 TRERF1Q96PN7 1200 aa16.06■□□□□ 0.16
SHANK2-214ENST00000468619 IFT57Q9NWB7 429 aa16.06■□□□□ 0.16
SHANK2-214ENST00000468619 MORC2Q9Y6X9 1032 aaPredicted RBP16.06■□□□□ 0.16
SHANK2-214ENST00000468619 ZNF335Q9H4Z2 1342 aaPredicted RBP16.06■□□□□ 0.16
SHANK2-214ENST00000468619 MCM2P49736 904 aa16.05■□□□□ 0.16
SHANK2-214ENST00000468619 LRMPQ12912 555 aa16.05■□□□□ 0.16
SHANK2-214ENST00000468619 CHMP4AQ9BY43 222 aa16.05■□□□□ 0.16
SHANK2-214ENST00000468619 C19orf44Q9H6X5 657 aa16.05■□□□□ 0.16
SHANK2-214ENST00000468619 XIRP1Q702N8 1843 aaKnown RBP16.05■□□□□ 0.16
SHANK2-214ENST00000468619 PIK3C2AO00443 1686 aa16.05■□□□□ 0.16
SHANK2-214ENST00000468619 WDR33Q9C0J8 1336 aaKnown RBP16.05■□□□□ 0.16
SHANK2-214ENST00000468619 GOLGA6L6A8MZA4 724 aa16.05■□□□□ 0.16
SHANK2-214ENST00000468619 FIBPO43427 364 aa16.05■□□□□ 0.16
SHANK2-214ENST00000468619 RRS1Q15050 365 aaKnown RBP16.05■□□□□ 0.16
SHANK2-214ENST00000468619 INTS4Q96HW7 963 aaKnown RBP16.05■□□□□ 0.16
SHANK2-214ENST00000468619 POLKQ9UBT6 870 aa16.05■□□□□ 0.16
SHANK2-214ENST00000468619 EMILIN1Q9Y6C2 1016 aa16.05■□□□□ 0.16
SHANK2-214ENST00000468619 TPM3P06753 285 aa16.04■□□□□ 0.16
SHANK2-214ENST00000468619 TNNT1P13805 278 aa16.04■□□□□ 0.16
SHANK2-214ENST00000468619 ZNF428Q96B54 188 aa16.04■□□□□ 0.16
SHANK2-214ENST00000468619 SMTNL1A8MU46 457 aa16.04■□□□□ 0.16
SHANK2-214ENST00000468619 NUTM2GQ5VZR2 741 aa16.04■□□□□ 0.16
SHANK2-214ENST00000468619 TSHZ3Q63HK5 1081 aa16.04■□□□□ 0.16
SHANK2-214ENST00000468619 OVOS2A0A0J9YW53 1432 aa16.04■□□□□ 0.16
SHANK2-214ENST00000468619 OVOS2Q6IE36 1432 aa16.04■□□□□ 0.16
SHANK2-214ENST00000468619 KRT222Q8N1A0 295 aa16.04■□□□□ 0.16
SHANK2-214ENST00000468619 ZNF592Q92610 1267 aa16.04■□□□□ 0.16
SHANK2-214ENST00000468619 COL3A1P02461 1466 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-214ENST00000468619 CCDC112Q8NEF3 446 aa16.03■□□□□ 0.16
SHANK2-214ENST00000468619 FUCA2Q9BTY2 467 aa16.03■□□□□ 0.16
SHANK2-214ENST00000468619 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.03■□□□□ 0.164e-6■□□□□ 8.6
SHANK2-214ENST00000468619 V9GYY5 206 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-214ENST00000468619 CCDC186Q7Z3E2 898 aa16.03■□□□□ 0.16
SHANK2-214ENST00000468619 ST7Q9NRC1 585 aa16.03■□□□□ 0.16
SHANK2-214ENST00000468619 TTC21AQ8NDW8 1320 aa16.02■□□□□ 0.16
SHANK2-214ENST00000468619 DIAPH1O60610 1272 aaKnown RBP16.02■□□□□ 0.16
SHANK2-214ENST00000468619 CAPN2P17655 700 aa16.02■□□□□ 0.16
SHANK2-214ENST00000468619 UBE2HP62256 183 aa16.02■□□□□ 0.16
SHANK2-214ENST00000468619 DNAJC2Q99543 621 aaKnown RBP16.02■□□□□ 0.16
SHANK2-214ENST00000468619 DTNBO60941 627 aa16.02■□□□□ 0.15
SHANK2-214ENST00000468619 ATF3P18847 181 aa16.02■□□□□ 0.15
SHANK2-214ENST00000468619 PRKAR2BP31323 418 aa16.02■□□□□ 0.15
SHANK2-214ENST00000468619 SYCP1Q15431 976 aa16.02■□□□□ 0.15
SHANK2-214ENST00000468619 ANO2Q9NQ90 1003 aa16.02■□□□□ 0.15
SHANK2-214ENST00000468619 TWISTNBQ3B726 338 aaPredicted RBP16.01■□□□□ 0.15
SHANK2-214ENST00000468619 DRC7Q8IY82 874 aa16.01■□□□□ 0.15
SHANK2-214ENST00000468619 ANKRD44Q8N8A2 993 aa16.01■□□□□ 0.15
SHANK2-214ENST00000468619 NRBP1Q9UHY1 535 aa16.01■□□□□ 0.15
SHANK2-214ENST00000468619 FOXO3O43524 673 aa16.01■□□□□ 0.15
SHANK2-214ENST00000468619 PSME1Q06323 249 aa16.01■□□□□ 0.15
SHANK2-214ENST00000468619 KMT5BQ4FZB7 885 aa16.01■□□□□ 0.15
SHANK2-214ENST00000468619 TAF7LQ5H9L4 462 aa16.01■□□□□ 0.15
SHANK2-214ENST00000468619 TMEM87AQ8NBN3 555 aa16.01■□□□□ 0.15
SHANK2-214ENST00000468619 API5Q9BZZ5 524 aaKnown RBP16.01■□□□□ 0.15
SHANK2-214ENST00000468619 C1orf167Q5SNV9 1468 aa16.01■□□□□ 0.15
SHANK2-214ENST00000468619 C8orf58Q8NAV2 365 aa16■□□□□ 0.15
SHANK2-214ENST00000468619 LARP6Q9BRS8 491 aaKnown RBP16■□□□□ 0.15
SHANK2-214ENST00000468619 MBIPQ9NS73 344 aa16■□□□□ 0.15
SHANK2-214ENST00000468619 MARF1Q9Y4F3 1742 aaKnown RBP16■□□□□ 0.15
SHANK2-214ENST00000468619 MCCP23508 829 aa15.99■□□□□ 0.15
SHANK2-214ENST00000468619 NLRP6P59044 892 aa15.99■□□□□ 0.15
SHANK2-214ENST00000468619 CEP85Q6P2H3 762 aa15.99■□□□□ 0.15
SHANK2-214ENST00000468619 ABTB2Q8N961 1025 aa15.99■□□□□ 0.15
SHANK2-214ENST00000468619 AATKQ6ZMQ8 1374 aa15.99■□□□□ 0.15
SHANK2-214ENST00000468619 RPAP1Q9BWH6 1393 aaPredicted RBP15.99■□□□□ 0.15
SHANK2-214ENST00000468619 TRIM6-TRIM34B2RNG4 842 aa15.99■□□□□ 0.15
SHANK2-214ENST00000468619 TPD52L1Q16890 204 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms