RNA–Protein interactions for RNA: ENST00000468417.1

CBWD2-207, Transcript of COBW domain containing 2, humanhuman

TSL 1 (best)

Gene CBWD2, Length 2,973 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2-207ENST00000468417 CYP27B1O15528 508 aa4.5□□□□□ -1.69
CBWD2-207ENST00000468417 PPARGC1BQ86YN6 1023 aaKnown RBP4.5□□□□□ -1.69
CBWD2-207ENST00000468417 NECTIN2Q92692 538 aa4.5□□□□□ -1.69
CBWD2-207ENST00000468417 CHMP4AQ9BY43 222 aa4.5□□□□□ -1.69
CBWD2-207ENST00000468417 TMF1P82094 1093 aa4.49□□□□□ -1.69
CBWD2-207ENST00000468417 NOM1Q5C9Z4 860 aaKnown RBP4.49□□□□□ -1.69
CBWD2-207ENST00000468417 NME9Q86XW9 330 aa4.49□□□□□ -1.69
CBWD2-207ENST00000468417 CDAN1Q8IWY9 1227 aa4.49□□□□□ -1.69
CBWD2-207ENST00000468417 PIM2Q9P1W9 311 aa4.49□□□□□ -1.69
CBWD2-207ENST00000468417 A0A087WZG4 1122 aa4.49□□□□□ -1.69
CBWD2-207ENST00000468417 FYB1O15117 783 aa4.49□□□□□ -1.69
CBWD2-207ENST00000468417 PHKG2P15735 406 aa4.49□□□□□ -1.69
CBWD2-207ENST00000468417 REM2Q8IYK8 340 aaPredicted RBP4.49□□□□□ -1.69
CBWD2-207ENST00000468417 SOS1Q07889 1333 aaPredicted RBP4.49□□□□□ -1.69
CBWD2-207ENST00000468417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.48□□□□□ -1.69
CBWD2-207ENST00000468417 RASSF10A6NK89 507 aa4.48□□□□□ -1.69
CBWD2-207ENST00000468417 GYS1P13807 737 aa4.48□□□□□ -1.69
CBWD2-207ENST00000468417 CAPN2P17655 700 aa4.48□□□□□ -1.69
CBWD2-207ENST00000468417 LMNB1P20700 586 aa4.48□□□□□ -1.69
CBWD2-207ENST00000468417 NBPF6Q5VWK0 638 aa4.48□□□□□ -1.69
CBWD2-207ENST00000468417 NUTM2GQ5VZR2 741 aa4.48□□□□□ -1.69
CBWD2-207ENST00000468417 STYK1Q6J9G0 422 aa4.48□□□□□ -1.69
CBWD2-207ENST00000468417 LINC00116Q8NCU8 138 aa4.48□□□□□ -1.69
CBWD2-207ENST00000468417 NBPF4Q96M43 638 aa4.48□□□□□ -1.69
CBWD2-207ENST00000468417 ANKRD36CQ5JPF3 1778 aa4.48□□□□□ -1.69
CBWD2-207ENST00000468417 CCDC88AQ3V6T2 1871 aa4.48□□□□□ -1.69
CBWD2-207ENST00000468417 VEGFAP15692 232 aaPredicted RBP4.48□□□□□ -1.69
CBWD2-207ENST00000468417 BRD2P25440 801 aaKnown RBP4.48□□□□□ -1.69
CBWD2-207ENST00000468417 TPRNQ4KMQ1 711 aa4.48□□□□□ -1.69
CBWD2-207ENST00000468417 CC2D2BQ6DHV5 1058 aa4.48□□□□□ -1.69
CBWD2-207ENST00000468417 PIGBQ92521 554 aa4.48□□□□□ -1.69
CBWD2-207ENST00000468417 RTCBQ9Y3I0 505 aaKnown RBP4.48□□□□□ -1.69
CBWD2-207ENST00000468417 CEMIPQ8WUJ3 1361 aa4.47□□□□□ -1.69
CBWD2-207ENST00000468417 CTCFP49711 727 aaPredicted RBP4.47□□□□□ -1.69
CBWD2-207ENST00000468417 MMRN1Q13201 1228 aa4.47□□□□□ -1.69
CBWD2-207ENST00000468417 DALRD3Q5D0E6 543 aaKnown RBP4.47□□□□□ -1.69
CBWD2-207ENST00000468417 TRAPPC3LQ5T215 181 aa4.47□□□□□ -1.69
CBWD2-207ENST00000468417 ATG3Q9NT62 314 aa4.47□□□□□ -1.69
CBWD2-207ENST00000468417 RNF123Q5XPI4 1314 aa4.47□□□□□ -1.69
CBWD2-207ENST00000468417 PSME4Q14997 1843 aa4.47□□□□□ -1.69
CBWD2-207ENST00000468417 MMP14P50281 582 aa4.47□□□□□ -1.69
CBWD2-207ENST00000468417 TEX13AQ9BXU3 409 aaPredicted RBP4.47□□□□□ -1.69
CBWD2-207ENST00000468417 PARP3Q9Y6F1 533 aa4.47□□□□□ -1.69
CBWD2-207ENST00000468417 KIF7Q2M1P5 1343 aa4.47□□□□□ -1.69
CBWD2-207ENST00000468417 IQCA1LA6NCM1 817 aa4.47□□□□□ -1.69
CBWD2-207ENST00000468417 POLRMTO00411 1230 aaKnown RBP4.47□□□□□ -1.69
CBWD2-207ENST00000468417 LDHDQ86WU2 507 aa4.47□□□□□ -1.69
CBWD2-207ENST00000468417 ACSBG1Q96GR2 724 aa4.47□□□□□ -1.69
CBWD2-207ENST00000468417 TMOD3Q9NYL9 352 aa4.47□□□□□ -1.69
CBWD2-207ENST00000468417 NARFQ9UHQ1 456 aa4.47□□□□□ -1.69
CBWD2-207ENST00000468417 SALL2Q9Y467 1007 aaPredicted RBP4.47□□□□□ -1.69
CBWD2-207ENST00000468417 LAMB2P55268 1798 aa4.46□□□□□ -1.69
CBWD2-207ENST00000468417 AMPHP49418 695 aa4.46□□□□□ -1.7
CBWD2-207ENST00000468417 C16orf71Q8IYS4 520 aaPredicted RBP4.46□□□□□ -1.7
CBWD2-207ENST00000468417 PIP4P2Q8N4L2 257 aa4.46□□□□□ -1.7
CBWD2-207ENST00000468417 SAGE1Q9NXZ1 904 aa4.46□□□□□ -1.7
CBWD2-207ENST00000468417 ITPK1Q13572 414 aa4.46□□□□□ -1.7
CBWD2-207ENST00000468417 AAMPQ13685 434 aa4.46□□□□□ -1.7
CBWD2-207ENST00000468417 CHADLQ6NUI6 762 aa4.46□□□□□ -1.7
CBWD2-207ENST00000468417 TNS4Q8IZW8 715 aa4.46□□□□□ -1.7
CBWD2-207ENST00000468417 RSPH6AQ9H0K4 717 aa4.46□□□□□ -1.7
CBWD2-207ENST00000468417 WBP1LQ9NX94 342 aa4.46□□□□□ -1.7
CBWD2-207ENST00000468417 PGAP2Q9UHJ9 254 aa4.46□□□□□ -1.7
CBWD2-207ENST00000468417 COL3A1P02461 1466 aaPredicted RBP4.46□□□□□ -1.7
CBWD2-207ENST00000468417 MMP10P09238 476 aa4.45□□□□□ -1.7
CBWD2-207ENST00000468417 PLEKHO1Q53GL0 409 aaPredicted RBP4.45□□□□□ -1.7
CBWD2-207ENST00000468417 C9orf131Q5VYM1 1079 aa4.45□□□□□ -1.7
CBWD2-207ENST00000468417 CLEC4GQ6UXB4 293 aa4.45□□□□□ -1.7
CBWD2-207ENST00000468417 KDM3BQ7LBC6 1761 aa4.45□□□□□ -1.7
CBWD2-207ENST00000468417 MAP2K2P36507 400 aa4.45□□□□□ -1.7
CBWD2-207ENST00000468417 MAP2K1Q02750 393 aaPredicted RBP4.45□□□□□ -1.7
CBWD2-207ENST00000468417 BRIP1Q9BX63 1249 aa4.45□□□□□ -1.7
CBWD2-207ENST00000468417 CFHR5Q9BXR6 569 aa4.45□□□□□ -1.7
CBWD2-207ENST00000468417 CARMIL3Q8ND23 1372 aa4.45□□□□□ -1.7
CBWD2-207ENST00000468417 DPEP1P16444 411 aa4.44□□□□□ -1.7
CBWD2-207ENST00000468417 FXR2P51116 673 aaKnown RBP eCLIP4.44□□□□□ -1.7
CBWD2-207ENST00000468417 NEUROD1Q13562 356 aa4.44□□□□□ -1.7
CBWD2-207ENST00000468417 PNMA8AQ86V59 439 aaPredicted RBP4.44□□□□□ -1.7
CBWD2-207ENST00000468417 ARHGEF1Q92888 912 aaKnown RBP4.44□□□□□ -1.7
CBWD2-207ENST00000468417 CARD11Q9BXL7 1154 aa4.44□□□□□ -1.7
CBWD2-207ENST00000468417 SLC12A5Q9H2X9 1139 aa4.44□□□□□ -1.7
CBWD2-207ENST00000468417 ZBTB12Q9Y330 459 aaPredicted RBP4.44□□□□□ -1.7
CBWD2-207ENST00000468417 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
CBWD2-207ENST00000468417 POTECB2RU33 542 aa4.44□□□□□ -1.7
CBWD2-207ENST00000468417 HSPA1AP0DMV8 641 aaKnown RBP4.44□□□□□ -1.7
CBWD2-207ENST00000468417 HSPA1BP0DMV9 641 aaKnown RBP4.44□□□□□ -1.7
CBWD2-207ENST00000468417 PDE6BP35913 854 aa4.44□□□□□ -1.7
CBWD2-207ENST00000468417 INTS5Q6P9B9 1019 aaKnown RBP4.44□□□□□ -1.7
CBWD2-207ENST00000468417 C7orf43Q8WVR3 580 aa4.44□□□□□ -1.7
CBWD2-207ENST00000468417 PSMD1Q99460 953 aa4.44□□□□□ -1.7
CBWD2-207ENST00000468417 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
CBWD2-207ENST00000468417 ABCB7O75027 752 aa4.44□□□□□ -1.7
CBWD2-207ENST00000468417 AKAP4Q5JQC9 854 aa4.44□□□□□ -1.7
CBWD2-207ENST00000468417 CNKSR1Q969H4 720 aa4.44□□□□□ -1.7
CBWD2-207ENST00000468417 WWC3Q9ULE0 1092 aa4.44□□□□□ -1.7
CBWD2-207ENST00000468417 COL15A1P39059 1388 aa4.44□□□□□ -1.7
CBWD2-207ENST00000468417 TTLL6Q8N841 843 aa4.43□□□□□ -1.7
CBWD2-207ENST00000468417 DDX54Q8TDD1 881 aaKnown RBP4.43□□□□□ -1.7
CBWD2-207ENST00000468417 SLC4A9Q96Q91 983 aa4.43□□□□□ -1.7
CBWD2-207ENST00000468417 ERBB4Q15303 1308 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms