RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 CC2D2BQ6DHV5 1058 aa5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 TMC7Q7Z402 723 aa5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 TRMT44Q8IYL2 757 aaKnown RBP5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 SREK1Q8WXA9 508 aaKnown RBP5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 HPS1Q92902 700 aa5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 COL26A1Q96A83 441 aa5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 C1QTNF2Q9BXJ5 285 aa5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 CYLDQ9NQC7 956 aa5.7□□□□□ -1.5
HMGB1P25-201ENST00000468402 STAU1O95793 577 aaKnown RBP5.69□□□□□ -1.5
HMGB1P25-201ENST00000468402 P4HBP07237 508 aaKnown RBP5.69□□□□□ -1.5
HMGB1P25-201ENST00000468402 BMP1P13497 986 aa5.69□□□□□ -1.5
HMGB1P25-201ENST00000468402 NAALADL2Q58DX5 795 aa5.69□□□□□ -1.5
HMGB1P25-201ENST00000468402 INTS6LQ5JSJ4 861 aaKnown RBP5.69□□□□□ -1.5
HMGB1P25-201ENST00000468402 TBCELQ5QJ74 424 aa5.69□□□□□ -1.5
HMGB1P25-201ENST00000468402 C9orf131Q5VYM1 1079 aa5.69□□□□□ -1.5
HMGB1P25-201ENST00000468402 ALKBH2Q6NS38 261 aa5.69□□□□□ -1.5
HMGB1P25-201ENST00000468402 C16orf46Q6P387 395 aa5.69□□□□□ -1.5
HMGB1P25-201ENST00000468402 BACH2Q9BYV9 841 aa5.69□□□□□ -1.5
HMGB1P25-201ENST00000468402 TSPAN10Q9H1Z9 355 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P25-201ENST00000468402 CHMP3Q9Y3E7 222 aa5.69□□□□□ -1.5
HMGB1P25-201ENST00000468402 TMEM229AB2RXF0 380 aa5.68□□□□□ -1.5
HMGB1P25-201ENST00000468402 RECKO95980 971 aa5.68□□□□□ -1.5
HMGB1P25-201ENST00000468402 LDHBP07195 334 aaKnown RBP5.68□□□□□ -1.5
HMGB1P25-201ENST00000468402 VARSP26640 1264 aaKnown RBP5.68□□□□□ -1.5
HMGB1P25-201ENST00000468402 ITGAEP38570 1179 aa5.68□□□□□ -1.5
HMGB1P25-201ENST00000468402 FGD1P98174 961 aa5.68□□□□□ -1.5
HMGB1P25-201ENST00000468402 TMEM87AQ8NBN3 555 aa5.68□□□□□ -1.5
HMGB1P25-201ENST00000468402 C8orf37Q96NL8 207 aa5.68□□□□□ -1.5
HMGB1P25-201ENST00000468402 RBCK1Q9BYM8 510 aa5.68□□□□□ -1.5
HMGB1P25-201ENST00000468402 SAP130Q9H0E3 1048 aa5.68□□□□□ -1.5
HMGB1P25-201ENST00000468402 SCAMP3O14828 347 aaKnown RBP5.67□□□□□ -1.5
HMGB1P25-201ENST00000468402 CAPN5O15484 640 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P25-201ENST00000468402 INHAP05111 366 aa5.67□□□□□ -1.5
HMGB1P25-201ENST00000468402 HSP90B1P14625 803 aaKnown RBP5.67□□□□□ -1.5
HMGB1P25-201ENST00000468402 ATP2B2Q01814 1243 aa5.67□□□□□ -1.5
HMGB1P25-201ENST00000468402 RC3H1Q5TC82 1133 aaKnown RBP5.67□□□□□ -1.5
HMGB1P25-201ENST00000468402 EHBP1Q8NDI1 1231 aa5.67□□□□□ -1.5
HMGB1P25-201ENST00000468402 TMPRSS4Q9NRS4 437 aa5.67□□□□□ -1.5
HMGB1P25-201ENST00000468402 CCDC87Q9NVE4 849 aa5.67□□□□□ -1.5
HMGB1P25-201ENST00000468402 FSHRP23945 695 aa5.66□□□□□ -1.5
HMGB1P25-201ENST00000468402 EIF1AXP47813 144 aaKnown RBP5.66□□□□□ -1.5
HMGB1P25-201ENST00000468402 SCNN1DP51172 638 aa5.66□□□□□ -1.5
HMGB1P25-201ENST00000468402 ERVK-9P63128 1117 aa5.66□□□□□ -1.5
HMGB1P25-201ENST00000468402 DHX9Q08211 1270 aaKnown RBP5.66□□□□□ -1.5
HMGB1P25-201ENST00000468402 PDE3BQ13370 1112 aa5.66□□□□□ -1.5
HMGB1P25-201ENST00000468402 SF3A1Q15459 793 aaKnown RBP5.66□□□□□ -1.5
HMGB1P25-201ENST00000468402 ESCO1Q5FWF5 840 aa5.66□□□□□ -1.5
HMGB1P25-201ENST00000468402 NGLY1Q96IV0 654 aa5.66□□□□□ -1.5
HMGB1P25-201ENST00000468402 FAM161BQ96MY7 647 aa5.66□□□□□ -1.5
HMGB1P25-201ENST00000468402 CITED4Q96RK1 184 aa5.66□□□□□ -1.5
HMGB1P25-201ENST00000468402 OSBPL3Q9H4L5 887 aa5.66□□□□□ -1.5
HMGB1P25-201ENST00000468402 STIM2Q9P246 746 aa5.66□□□□□ -1.5
HMGB1P25-201ENST00000468402 VTI1BQ9UEU0 232 aa5.66□□□□□ -1.5
HMGB1P25-201ENST00000468402 A0A1W2PRU2 124 aa5.65□□□□□ -1.5
HMGB1P25-201ENST00000468402 TREHO43280 583 aa5.65□□□□□ -1.5
HMGB1P25-201ENST00000468402 NPR3P17342 541 aa5.65□□□□□ -1.5
HMGB1P25-201ENST00000468402 PSMD2Q13200 908 aa5.65□□□□□ -1.5
HMGB1P25-201ENST00000468402 SCARF1Q14162 830 aa5.65□□□□□ -1.5
HMGB1P25-201ENST00000468402 CYP2U1Q7Z449 544 aa5.65□□□□□ -1.5
HMGB1P25-201ENST00000468402 SLC9A9Q8IVB4 645 aa5.65□□□□□ -1.5
HMGB1P25-201ENST00000468402 FAM177A1Q8N128 213 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P25-201ENST00000468402 DMRTB1Q96MA1 342 aa5.65□□□□□ -1.5
HMGB1P25-201ENST00000468402 DUSP9Q99956 384 aaKnown RBP5.65□□□□□ -1.5
HMGB1P25-201ENST00000468402 ETNK1Q9HBU6 452 aa5.65□□□□□ -1.5
HMGB1P25-201ENST00000468402 PARP2Q9UGN5 583 aa5.65□□□□□ -1.5
HMGB1P25-201ENST00000468402 SORBS3O60504 671 aa5.64□□□□□ -1.51
HMGB1P25-201ENST00000468402 EHHADHQ08426 723 aa5.64□□□□□ -1.51
HMGB1P25-201ENST00000468402 COX20Q5RI15 118 aa5.64□□□□□ -1.51
HMGB1P25-201ENST00000468402 ZNF784Q8NCA9 323 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P25-201ENST00000468402 TTC16Q8NEE8 873 aa5.64□□□□□ -1.51
HMGB1P25-201ENST00000468402 PUS7Q96PZ0 661 aaKnown RBP5.64□□□□□ -1.51
HMGB1P25-201ENST00000468402 NIF3L1Q9GZT8 377 aa5.64□□□□□ -1.51
HMGB1P25-201ENST00000468402 RAB6BQ9NRW1 208 aa5.64□□□□□ -1.51
HMGB1P25-201ENST00000468402 ZNF232Q9UNY5 417 aa5.64□□□□□ -1.51
HMGB1P25-201ENST00000468402 MAP4K5Q9Y4K4 846 aa5.64□□□□□ -1.51
HMGB1P25-201ENST00000468402 A6NJY4 79 aa5.63□□□□□ -1.51
HMGB1P25-201ENST00000468402 PRPF40AO75400 957 aaKnown RBP5.63□□□□□ -1.51
HMGB1P25-201ENST00000468402 GNRH1P01148 92 aa5.63□□□□□ -1.51
HMGB1P25-201ENST00000468402 CDK11BP21127 795 aaKnown RBP5.63□□□□□ -1.51
HMGB1P25-201ENST00000468402 BRD2P25440 801 aaKnown RBP5.63□□□□□ -1.51
HMGB1P25-201ENST00000468402 SMTNP53814 917 aa5.63□□□□□ -1.51
HMGB1P25-201ENST00000468402 PSMA6P60900 246 aaKnown RBP5.63□□□□□ -1.51
HMGB1P25-201ENST00000468402 HDLBPQ00341 1268 aaKnown RBP5.63□□□□□ -1.51
HMGB1P25-201ENST00000468402 DNM1Q05193 864 aaKnown RBP5.63□□□□□ -1.51
HMGB1P25-201ENST00000468402 ABTB2Q8N961 1025 aa5.63□□□□□ -1.51
HMGB1P25-201ENST00000468402 UBXN4Q92575 508 aa5.63□□□□□ -1.51
HMGB1P25-201ENST00000468402 SCHIP1Q9P0W5 487 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P25-201ENST00000468402 CDK11AQ9UQ88 783 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P25-201ENST00000468402 WASLO00401 505 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P25-201ENST00000468402 FZD6O60353 706 aa5.62□□□□□ -1.51
HMGB1P25-201ENST00000468402 PCSK2P16519 638 aa5.62□□□□□ -1.51
HMGB1P25-201ENST00000468402 WNT7BP56706 349 aa5.62□□□□□ -1.51
HMGB1P25-201ENST00000468402 FMR1Q06787 632 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGB1P25-201ENST00000468402 MRPL58Q14197 206 aaKnown RBP5.62□□□□□ -1.51
HMGB1P25-201ENST00000468402 SUZ12Q15022 739 aaKnown RBP5.62□□□□□ -1.51
HMGB1P25-201ENST00000468402 TLR1Q15399 786 aa5.62□□□□□ -1.51
HMGB1P25-201ENST00000468402 ATCAYQ86WG3 371 aa5.62□□□□□ -1.51
HMGB1P25-201ENST00000468402 NT5DC4Q86YG4 428 aa5.62□□□□□ -1.51
HMGB1P25-201ENST00000468402 CCDC116Q8IYX3 515 aa5.62□□□□□ -1.51
HMGB1P25-201ENST00000468402 SLC4A9Q96Q91 983 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms