RNA–Protein interactions for RNA: ENST00000468166.5

SND1-206, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-206ENST00000468166 G2E3Q7L622 706 aa10.12□□□□□ -0.79
SND1-206ENST00000468166 ZNF496Q96IT1 587 aaPredicted RBP10.12□□□□□ -0.79
SND1-206ENST00000468166 CHMP4BQ9H444 224 aaKnown RBP10.12□□□□□ -0.79
SND1-206ENST00000468166 CHPF2Q9P2E5 772 aa10.12□□□□□ -0.79
SND1-206ENST00000468166 BCL9O00512 1426 aa10.11□□□□□ -0.79
SND1-206ENST00000468166 ATRNO75882 1429 aa10.11□□□□□ -0.79
SND1-206ENST00000468166 A0A0G2JS52 829 aa10.11□□□□□ -0.79
SND1-206ENST00000468166 PRAMEF22A3QJZ6 481 aa10.11□□□□□ -0.79
SND1-206ENST00000468166 SNRPA1P09661 255 aaKnown RBP10.11□□□□□ -0.79
SND1-206ENST00000468166 MYT1Q01538 1121 aa10.11□□□□□ -0.79
SND1-206ENST00000468166 FKBP5Q13451 457 aaPredicted RBP10.11□□□□□ -0.79
SND1-206ENST00000468166 DBF4Q9UBU7 674 aaPredicted RBP10.11□□□□□ -0.79
SND1-206ENST00000468166 INTS3Q68E01 1043 aaKnown RBP10.1□□□□□ -0.79
SND1-206ENST00000468166 CENPQQ7L2Z9 268 aaPredicted RBP10.1□□□□□ -0.79
SND1-206ENST00000468166 CCT4P50991 539 aaKnown RBP10.09□□□□□ -0.79
SND1-206ENST00000468166 SLC4A10Q6U841 1118 aa10.09□□□□□ -0.79
SND1-206ENST00000468166 MARCH10Q8NA82 808 aaPredicted RBP10.09□□□□□ -0.79
SND1-206ENST00000468166 PIGBQ92521 554 aa10.09□□□□□ -0.79
SND1-206ENST00000468166 SYTL4Q96C24 671 aaPredicted RBP10.09□□□□□ -0.79
SND1-206ENST00000468166 PHAXQ9H814 394 aaKnown RBP10.09□□□□□ -0.79
SND1-206ENST00000468166 HYPKQ9NX55 129 aa10.09□□□□□ -0.79
SND1-206ENST00000468166 TRPC5Q9UL62 973 aaPredicted RBP10.09□□□□□ -0.79
SND1-206ENST00000468166 TJP1Q07157 1748 aa10.09□□□□□ -0.79
SND1-206ENST00000468166 ARFGEF2Q9Y6D5 1785 aa10.09□□□□□ -0.79
SND1-206ENST00000468166 KDM2BQ8NHM5 1336 aa10.08□□□□□ -0.8
SND1-206ENST00000468166 F6X3S4 739 aa10.08□□□□□ -0.8
SND1-206ENST00000468166 PTCD1O75127 700 aaKnown RBP10.08□□□□□ -0.8
SND1-206ENST00000468166 ANXA1P04083 346 aa10.08□□□□□ -0.8
SND1-206ENST00000468166 PROSER3Q2NL68 480 aa10.08□□□□□ -0.8
SND1-206ENST00000468166 GJD4Q96KN9 370 aaPredicted RBP10.08□□□□□ -0.8
SND1-206ENST00000468166 DDX21Q9NR30 783 aaKnown RBP eCLIP10.08□□□□□ -0.8
SND1-206ENST00000468166 ZBTB40Q9NUA8 1239 aa10.08□□□□□ -0.8
SND1-206ENST00000468166 NHSQ6T4R5 1651 aa10.08□□□□□ -0.8
SND1-206ENST00000468166 ERBB4Q15303 1308 aa10.07□□□□□ -0.8
SND1-206ENST00000468166 CICQ96RK0 1608 aaPredicted RBP10.07□□□□□ -0.8
SND1-206ENST00000468166 ZBTB7BO15156 539 aaPredicted RBP10.07□□□□□ -0.8
SND1-206ENST00000468166 PRIM1P49642 420 aaKnown RBP10.07□□□□□ -0.8
SND1-206ENST00000468166 ATG3Q9NT62 314 aa10.07□□□□□ -0.8
SND1-206ENST00000468166 ASAP1Q9ULH1 1129 aa10.07□□□□□ -0.8
SND1-206ENST00000468166 PCDHB15Q9Y5E8 787 aa10.07□□□□□ -0.8
SND1-206ENST00000468166 USP16Q9Y5T5 823 aa10.07□□□□□ -0.8
SND1-206ENST00000468166 AFDNP55196 1824 aaKnown RBP10.07□□□□□ -0.8
SND1-206ENST00000468166 NUP188Q5SRE5 1749 aa10.07□□□□□ -0.8
SND1-206ENST00000468166 ADCY9O60503 1353 aa10.06□□□□□ -0.8
SND1-206ENST00000468166 BTAF1O14981 1849 aa10.06□□□□□ -0.8
SND1-206ENST00000468166 SBF2Q86WG5 1849 aa10.06□□□□□ -0.8
SND1-206ENST00000468166 DDX58O95786 925 aaKnown RBP10.06□□□□□ -0.8
SND1-206ENST00000468166 MYL6BP14649 208 aa10.06□□□□□ -0.8
SND1-206ENST00000468166 PDIA6Q15084 440 aa10.06□□□□□ -0.8
SND1-206ENST00000468166 VSIG10Q8N0Z9 540 aa10.06□□□□□ -0.8
SND1-206ENST00000468166 ACSBG1Q96GR2 724 aa10.06□□□□□ -0.8
SND1-206ENST00000468166 RWDD1Q9H446 243 aaPredicted RBP10.06□□□□□ -0.8
SND1-206ENST00000468166 ATP10DQ9P241 1426 aa10.06□□□□□ -0.8
SND1-206ENST00000468166 BRWD3Q6RI45 1802 aa10.05□□□□□ -0.8
SND1-206ENST00000468166 DNAAF4Q8WXU2 420 aa10.05□□□□□ -0.8
SND1-206ENST00000468166 RBM42Q9BTD8 480 aaKnown RBP10.05□□□□□ -0.8
SND1-206ENST00000468166 TEX13AQ9BXU3 409 aaPredicted RBP10.05□□□□□ -0.8
SND1-206ENST00000468166 C1orf115Q9H7X2 142 aa10.05□□□□□ -0.8
SND1-206ENST00000468166 ZNF831Q5JPB2 1677 aa10.05□□□□□ -0.8
SND1-206ENST00000468166 PI4KAP2A4QPH2 592 aa10.04□□□□□ -0.8
SND1-206ENST00000468166 IGHDP01880 384 aa10.04□□□□□ -0.8
SND1-206ENST00000468166 AIMP1Q12904 312 aaKnown RBP10.04□□□□□ -0.8
SND1-206ENST00000468166 HDAC1Q13547 482 aaPredicted RBP10.04□□□□□ -0.8
SND1-206ENST00000468166 KSR2Q6VAB6 950 aa10.04□□□□□ -0.8
SND1-206ENST00000468166 PI4KAP1Q8N8J0 262 aa10.04□□□□□ -0.8
SND1-206ENST00000468166 XAGE3Q8WTP9 111 aa10.04□□□□□ -0.8
SND1-206ENST00000468166 MEIS3Q99687 375 aa10.04□□□□□ -0.8
SND1-206ENST00000468166 QTRT2Q9H974 415 aaKnown RBP10.04□□□□□ -0.8
SND1-206ENST00000468166 MAP3K2Q9Y2U5 619 aa10.04□□□□□ -0.8
SND1-206ENST00000468166 COL5A3P25940 1745 aaPredicted RBP10.04□□□□□ -0.8
SND1-206ENST00000468166 RREB1Q92766 1687 aa10.03□□□□□ -0.8
SND1-206ENST00000468166 STARD3NLO95772 234 aa10.03□□□□□ -0.8
SND1-206ENST00000468166 PIP4K2AP48426 406 aaPredicted RBP10.03□□□□□ -0.8
SND1-206ENST00000468166 DNAJC10Q8IXB1 793 aa10.03□□□□□ -0.8
SND1-206ENST00000468166 SRCIN1Q9C0H9 1055 aa10.03□□□□□ -0.8
SND1-206ENST00000468166 PALLDQ8WX93 1383 aa10.02□□□□□ -0.8
SND1-206ENST00000468166 NBPF26B4DH59 902 aa10.02□□□□□ -0.81
SND1-206ENST00000468166 ONECUT3O60422 494 aaPredicted RBP10.02□□□□□ -0.81
SND1-206ENST00000468166 GNAI3P08754 354 aa10.02□□□□□ -0.81
SND1-206ENST00000468166 BEND3Q5T5X7 828 aa10.02□□□□□ -0.81
SND1-206ENST00000468166 NBPF14Q5TI25 921 aa10.02□□□□□ -0.81
SND1-206ENST00000468166 ZNF772Q68DY9 489 aaPredicted RBP10.02□□□□□ -0.81
SND1-206ENST00000468166 NBPF10Q6P3W6 841 aaKnown RBP10.02□□□□□ -0.81
SND1-206ENST00000468166 COPS6Q7L5N1 327 aa10.02□□□□□ -0.81
SND1-206ENST00000468166 LRP10Q7Z4F1 713 aa10.02□□□□□ -0.81
SND1-206ENST00000468166 RIC3Q7Z5B4 369 aa10.02□□□□□ -0.81
SND1-206ENST00000468166 SEPT12Q8IYM1 358 aa10.02□□□□□ -0.81
SND1-206ENST00000468166 NBPF15Q8N660 670 aa10.02□□□□□ -0.81
SND1-206ENST00000468166 SMARCC1Q92922 1105 aaPredicted RBP10.02□□□□□ -0.81
SND1-206ENST00000468166 ANKRD36CQ5JPF3 1778 aa10.01□□□□□ -0.81
SND1-206ENST00000468166 KCNQ2O43526 872 aa10.01□□□□□ -0.81
SND1-206ENST00000468166 ALDH1L1O75891 902 aa10.01□□□□□ -0.81
SND1-206ENST00000468166 A1BGP04217 495 aa10.01□□□□□ -0.81
SND1-206ENST00000468166 GNAI2P04899 355 aa10.01□□□□□ -0.81
SND1-206ENST00000468166 UBTFL1P0CB47 393 aaPredicted RBP10.01□□□□□ -0.81
SND1-206ENST00000468166 NEXNQ0ZGT2 675 aa10.01□□□□□ -0.81
SND1-206ENST00000468166 LY75O60449 1722 aa10.01□□□□□ -0.81
SND1-206ENST00000468166 ANKRD13DQ6ZTN6 518 aa10□□□□□ -0.81
SND1-206ENST00000468166 RPAP2Q8IXW5 612 aaPredicted RBP10□□□□□ -0.81
SND1-206ENST00000468166 ANKRD44Q8N8A2 993 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms