RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 SCN11AQ9UI33 1791 aa18.68■□□□□ 0.58
RPP40-204ENST00000468105 NFIXQ14938 502 aa18.67■□□□□ 0.58
RPP40-204ENST00000468105 POLR3GLQ9BT43 218 aa18.67■□□□□ 0.58
RPP40-204ENST00000468105 SOS1Q07889 1333 aaPredicted RBP18.67■□□□□ 0.58
RPP40-204ENST00000468105 SLC39A6Q13433 755 aa18.66■□□□□ 0.58
RPP40-204ENST00000468105 CCDC88AQ3V6T2 1871 aa18.66■□□□□ 0.58
RPP40-204ENST00000468105 DLEC1Q9Y238 1755 aa18.65■□□□□ 0.58
RPP40-204ENST00000468105 NFKBIEO00221 500 aa18.65■□□□□ 0.58
RPP40-204ENST00000468105 CYP19A1P11511 503 aaPredicted RBP18.65■□□□□ 0.58
RPP40-204ENST00000468105 AMOTQ4VCS5 1084 aa18.65■□□□□ 0.58
RPP40-204ENST00000468105 SULT6B1Q6IMI4 303 aa18.65■□□□□ 0.58
RPP40-204ENST00000468105 TNS4Q8IZW8 715 aa18.65■□□□□ 0.58
RPP40-204ENST00000468105 IL13P35225 146 aa18.64■□□□□ 0.57
RPP40-204ENST00000468105 SMC1BQ8NDV3 1235 aa18.64■□□□□ 0.57
RPP40-204ENST00000468105 PANK3Q9H999 370 aa18.64■□□□□ 0.57
RPP40-204ENST00000468105 GLTPD2A6NH11 291 aa18.63■□□□□ 0.57
RPP40-204ENST00000468105 HSPA1AP0DMV8 641 aaKnown RBP18.63■□□□□ 0.57
RPP40-204ENST00000468105 HSPA1BP0DMV9 641 aaKnown RBP18.63■□□□□ 0.57
RPP40-204ENST00000468105 ZBTB1Q9Y2K1 713 aa18.63■□□□□ 0.57
RPP40-204ENST00000468105 TIAM2Q8IVF5 1701 aa18.63■□□□□ 0.57
RPP40-204ENST00000468105 ANKRD31Q8N7Z5 1873 aa18.61■□□□□ 0.57
RPP40-204ENST00000468105 C1orf141Q5JVX7 400 aa18.61■□□□□ 0.57
RPP40-204ENST00000468105 NARFQ9UHQ1 456 aa18.61■□□□□ 0.57
RPP40-204ENST00000468105 SERPINB2P05120 415 aa18.6■□□□□ 0.57
RPP40-204ENST00000468105 POTEIP0CG38 1075 aa18.6■□□□□ 0.57
RPP40-204ENST00000468105 POTEJP0CG39 1038 aa18.6■□□□□ 0.57
RPP40-204ENST00000468105 LMNB1P20700 586 aa18.6■□□□□ 0.57
RPP40-204ENST00000468105 SLC52A2Q9HAB3 445 aa18.6■□□□□ 0.57
RPP40-204ENST00000468105 VIRMAQ69YN4 1812 aaKnown RBP18.6■□□□□ 0.57
RPP40-204ENST00000468105 MRC1P22897 1456 aa18.59■□□□□ 0.57
RPP40-204ENST00000468105 COL15A1P39059 1388 aa18.59■□□□□ 0.57
RPP40-204ENST00000468105 ZPR1O75312 459 aa18.59■□□□□ 0.57
RPP40-204ENST00000468105 VEGFAP15692 232 aaPredicted RBP18.59■□□□□ 0.57
RPP40-204ENST00000468105 CCDC24Q8N4L8 307 aa18.59■□□□□ 0.57
RPP40-204ENST00000468105 C2CD5Q86YS7 1000 aa18.58■□□□□ 0.56
RPP40-204ENST00000468105 COL11A2P13942 1736 aaPredicted RBP18.57■□□□□ 0.56
RPP40-204ENST00000468105 RNMTO43148 476 aaKnown RBP18.57■□□□□ 0.56
RPP40-204ENST00000468105 AKAP4Q5JQC9 854 aa18.57■□□□□ 0.56
RPP40-204ENST00000468105 ZC3H4Q9UPT8 1303 aaKnown RBP18.56■□□□□ 0.56
RPP40-204ENST00000468105 TTLL6Q8N841 843 aa18.56■□□□□ 0.56
RPP40-204ENST00000468105 BICDL1Q6ZP65 573 aa18.55■□□□□ 0.56
RPP40-204ENST00000468105 MORC1Q86VD1 984 aa18.55■□□□□ 0.56
RPP40-204ENST00000468105 ZNF219Q9P2Y4 722 aaPredicted RBP18.55■□□□□ 0.56
RPP40-204ENST00000468105 UBR2Q8IWV8 1755 aa18.55■□□□□ 0.56
RPP40-204ENST00000468105 FER1L6Q2WGJ9 1857 aa18.54■□□□□ 0.56
RPP40-204ENST00000468105 HMOX1P09601 288 aa18.54■□□□□ 0.56
RPP40-204ENST00000468105 HSPA5P11021 654 aaKnown RBP18.54■□□□□ 0.56
RPP40-204ENST00000468105 CANXP27824 592 aaKnown RBP18.54■□□□□ 0.56
RPP40-204ENST00000468105 MTHFSDQ2M296 383 aaKnown RBP18.54■□□□□ 0.56
RPP40-204ENST00000468105 TBC1D9BQ66K14 1250 aa18.54■□□□□ 0.56
RPP40-204ENST00000468105 EIF5P55010 431 aaKnown RBP18.53■□□□□ 0.56
RPP40-204ENST00000468105 DICER1Q9UPY3 1922 aaKnown RBP18.53■□□□□ 0.56
RPP40-204ENST00000468105 C21orf2O43822 256 aa18.52■□□□□ 0.56
RPP40-204ENST00000468105 PRR5LQ6MZQ0 368 aa18.51■□□□□ 0.55
RPP40-204ENST00000468105 MKRN1Q9UHC7 482 aaKnown RBP18.51■□□□□ 0.55
RPP40-204ENST00000468105 SLX4Q8IY92 1834 aa18.51■□□□□ 0.55
RPP40-204ENST00000468105 H0YIN7 160 aa18.5■□□□□ 0.55
RPP40-204ENST00000468105 DDNO94850 711 aaPredicted RBP18.5■□□□□ 0.55
RPP40-204ENST00000468105 AMER1Q5JTC6 1135 aaPredicted RBP18.49■□□□□ 0.55
RPP40-204ENST00000468105 SCN7AQ01118 1682 aa18.48■□□□□ 0.55
RPP40-204ENST00000468105 ZNF622Q969S3 477 aaKnown RBP eCLIP18.48■□□□□ 0.55
RPP40-204ENST00000468105 ZNF496Q96IT1 587 aaPredicted RBP18.48■□□□□ 0.55
RPP40-204ENST00000468105 TBC1D2BQ9UPU7 963 aa18.48■□□□□ 0.55
RPP40-204ENST00000468105 FOXN1O15353 648 aa18.47■□□□□ 0.55
RPP40-204ENST00000468105 ERFEQ4G0M1 354 aa18.47■□□□□ 0.55
RPP40-204ENST00000468105 VSIG10Q8N0Z9 540 aa18.47■□□□□ 0.55
RPP40-204ENST00000468105 CACNA1SQ13698 1873 aa18.47■□□□□ 0.55
RPP40-204ENST00000468105 CHADLQ6NUI6 762 aa18.46■□□□□ 0.55
RPP40-204ENST00000468105 IL17REQ8NFR9 667 aa18.46■□□□□ 0.55
RPP40-204ENST00000468105 BRIP1Q9BX63 1249 aa18.46■□□□□ 0.55
RPP40-204ENST00000468105 KCNQ3O43525 872 aa18.45■□□□□ 0.54
RPP40-204ENST00000468105 CREBZFQ9NS37 354 aa18.45■□□□□ 0.54
RPP40-204ENST00000468105 PASKQ96RG2 1323 aa18.45■□□□□ 0.54
RPP40-204ENST00000468105 A1BGP04217 495 aa18.44■□□□□ 0.54
RPP40-204ENST00000468105 OLFM4Q6UX06 510 aa18.44■□□□□ 0.54
RPP40-204ENST00000468105 SIPA1L3O60292 1781 aaPredicted RBP18.44■□□□□ 0.54
RPP40-204ENST00000468105 CAMTA2O94983 1202 aa18.43■□□□□ 0.54
RPP40-204ENST00000468105 PIP4K2AP48426 406 aaPredicted RBP18.43■□□□□ 0.54
RPP40-204ENST00000468105 C7orf43Q8WVR3 580 aa18.43■□□□□ 0.54
RPP40-204ENST00000468105 LTBP3Q9NS15 1303 aa18.43■□□□□ 0.54
RPP40-204ENST00000468105 SRGNP10124 158 aa18.42■□□□□ 0.54
RPP40-204ENST00000468105 EIF4G2P78344 907 aaKnown RBP eCLIP18.42■□□□□ 0.54
RPP40-204ENST00000468105 DPY19L2Q6NUT2 758 aa18.42■□□□□ 0.54
RPP40-204ENST00000468105 CNTNAP1P78357 1384 aa18.42■□□□□ 0.54
RPP40-204ENST00000468105 HEG1Q9ULI3 1381 aa18.42■□□□□ 0.54
RPP40-204ENST00000468105 PRAMEF22A3QJZ6 481 aa18.41■□□□□ 0.54
RPP40-204ENST00000468105 ITGBL1O95965 494 aaPredicted RBP18.41■□□□□ 0.54
RPP40-204ENST00000468105 PRPF40BQ6NWY9 871 aaKnown RBP18.41■□□□□ 0.54
RPP40-204ENST00000468105 TAOK3Q9H2K8 898 aa18.41■□□□□ 0.54
RPP40-204ENST00000468105 ZNF330Q9Y3S2 320 aaPredicted RBP18.41■□□□□ 0.54
RPP40-204ENST00000468105 COL3A1P02461 1466 aaPredicted RBP18.4■□□□□ 0.54
RPP40-204ENST00000468105 ARFGEF2Q9Y6D5 1785 aa18.4■□□□□ 0.54
RPP40-204ENST00000468105 PDE6BP35913 854 aa18.4■□□□□ 0.54
RPP40-204ENST00000468105 VEGFBP49765 207 aa18.4■□□□□ 0.54
RPP40-204ENST00000468105 ZNF790Q6PG37 636 aa18.4■□□□□ 0.54
RPP40-204ENST00000468105 KNSTRNQ9Y448 316 aa18.4■□□□□ 0.54
RPP40-204ENST00000468105 ZNF541Q9H0D2 1346 aa18.4■□□□□ 0.54
RPP40-204ENST00000468105 ADAMTSL1Q8N6G6 1762 aa18.4■□□□□ 0.54
RPP40-204ENST00000468105 PER1O15534 1290 aaPredicted RBP18.39■□□□□ 0.53
RPP40-204ENST00000468105 STARD3NLO95772 234 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms