RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 ERCC4Q92889 916 aaPredicted RBP11.03□□□□□ -0.64
LCA5-203ENST00000467898 SHPRHQ149N8 1683 aa11.03□□□□□ -0.64
LCA5-203ENST00000467898 PPP2R5AQ15172 486 aa11.02□□□□□ -0.64
LCA5-203ENST00000467898 JAKMIP3Q5VZ66 844 aa11.02□□□□□ -0.64
LCA5-203ENST00000467898 PPM1EQ8WY54 764 aa11.02□□□□□ -0.65
LCA5-203ENST00000467898 TEX13AQ9BXU3 409 aaPredicted RBP11.02□□□□□ -0.65
LCA5-203ENST00000467898 CGNL1Q0VF96 1302 aa11.02□□□□□ -0.65
LCA5-203ENST00000467898 CPP00450 1065 aa11.02□□□□□ -0.65
LCA5-203ENST00000467898 TPM4P67936 248 aa11.02□□□□□ -0.65
LCA5-203ENST00000467898 BMS1Q14692 1282 aaKnown RBP11.02□□□□□ -0.65
LCA5-203ENST00000467898 GOLGA5Q8TBA6 731 aa11.02□□□□□ -0.65
LCA5-203ENST00000467898 IPO8O15397 1037 aaKnown RBP11.01□□□□□ -0.65
LCA5-203ENST00000467898 NSD3Q9BZ95 1437 aa11.01□□□□□ -0.65
LCA5-203ENST00000467898 YTHDC2Q9H6S0 1430 aaKnown RBP11.01□□□□□ -0.65
LCA5-203ENST00000467898 C21orf2O43822 256 aa11.01□□□□□ -0.65
LCA5-203ENST00000467898 BAG4O95429 457 aaKnown RBP11.01□□□□□ -0.65
LCA5-203ENST00000467898 MMS22LQ6ZRQ5 1243 aa11.01□□□□□ -0.65
LCA5-203ENST00000467898 ADAMTS8Q9UP79 889 aa11.01□□□□□ -0.65
LCA5-203ENST00000467898 RRP15Q9Y3B9 282 aaKnown RBP11.01□□□□□ -0.65
LCA5-203ENST00000467898 TRIM66O15016 1216 aa11□□□□□ -0.65
LCA5-203ENST00000467898 TNNT1P13805 278 aa11□□□□□ -0.65
LCA5-203ENST00000467898 ZSCAN26Q16670 478 aa11□□□□□ -0.65
LCA5-203ENST00000467898 CAVIN1Q6NZI2 390 aaKnown RBP11□□□□□ -0.65
LCA5-203ENST00000467898 KRBA2Q6ZNG9 492 aa11□□□□□ -0.65
LCA5-203ENST00000467898 RINLQ6ZS11 566 aa11□□□□□ -0.65
LCA5-203ENST00000467898 KIAA1524Q8TCG1 905 aa11□□□□□ -0.65
LCA5-203ENST00000467898 CCDC191Q8NCU4 936 aa11□□□□□ -0.65
LCA5-203ENST00000467898 SLC12A5Q9H2X9 1139 aa11□□□□□ -0.65
LCA5-203ENST00000467898 DLC1Q96QB1 1528 aa11□□□□□ -0.65
LCA5-203ENST00000467898 SART3Q15020 963 aaKnown RBP10.99□□□□□ -0.65
LCA5-203ENST00000467898 FBXO18Q8NFZ0 1043 aa10.99□□□□□ -0.65
LCA5-203ENST00000467898 CWC22Q9HCG8 908 aaKnown RBP10.99□□□□□ -0.65
LCA5-203ENST00000467898 HTATSF1O43719 755 aaKnown RBP10.99□□□□□ -0.65
LCA5-203ENST00000467898 HSP90AB4PQ58FF6 505 aa10.99□□□□□ -0.65
LCA5-203ENST00000467898 PACS2Q86VP3 889 aa10.99□□□□□ -0.65
LCA5-203ENST00000467898 ANAPC4Q9UJX5 808 aa10.99□□□□□ -0.65
LCA5-203ENST00000467898 UBR1Q8IWV7 1749 aa10.99□□□□□ -0.65
LCA5-203ENST00000467898 RIMS2Q9UQ26 1411 aa10.99□□□□□ -0.65
LCA5-203ENST00000467898 ANKRD18BA2A2Z9 1011 aa10.99□□□□□ -0.65
LCA5-203ENST00000467898 EIF3JO75822 258 aaKnown RBP10.99□□□□□ -0.65
LCA5-203ENST00000467898 STAG1Q8WVM7 1258 aa10.99□□□□□ -0.65
LCA5-203ENST00000467898 RPS6KL1Q9Y6S9 549 aa10.99□□□□□ -0.65
LCA5-203ENST00000467898 ANKRD26Q9UPS8 1709 aa10.98□□□□□ -0.65
LCA5-203ENST00000467898 IVLP07476 585 aa10.98□□□□□ -0.65
LCA5-203ENST00000467898 TMTC2Q8N394 836 aa10.98□□□□□ -0.65
LCA5-203ENST00000467898 TSPAN18Q96SJ8 248 aa10.98□□□□□ -0.65
LCA5-203ENST00000467898 PSD3Q9NYI0 1048 aa10.98□□□□□ -0.65
LCA5-203ENST00000467898 EVC2Q86UK5 1308 aa10.98□□□□□ -0.65
LCA5-203ENST00000467898 ANKRD36BQ8N2N9 1353 aa10.98□□□□□ -0.65
LCA5-203ENST00000467898 CD163L1Q9NR16 1453 aa10.98□□□□□ -0.65
LCA5-203ENST00000467898 KNDC1Q76NI1 1749 aa10.97□□□□□ -0.65
LCA5-203ENST00000467898 USP8P40818 1118 aa10.97□□□□□ -0.65
LCA5-203ENST00000467898 CDCA7LQ96GN5 454 aa10.97□□□□□ -0.65
LCA5-203ENST00000467898 SUDS3Q9H7L9 328 aaPredicted RBP10.97□□□□□ -0.65
LCA5-203ENST00000467898 ZNF521Q96K83 1311 aa10.97□□□□□ -0.65
LCA5-203ENST00000467898 POLR3AO14802 1390 aaPredicted RBP10.97□□□□□ -0.65
LCA5-203ENST00000467898 RBM6P78332 1123 aaKnown RBP10.97□□□□□ -0.65
LCA5-203ENST00000467898 LMBRD1Q9NUN5 540 aa10.97□□□□□ -0.65
LCA5-203ENST00000467898 ETAA1Q9NY74 926 aa10.97□□□□□ -0.65
LCA5-203ENST00000467898 SGSM2O43147 1006 aa10.96□□□□□ -0.65
LCA5-203ENST00000467898 TPM1P09493 284 aa10.96□□□□□ -0.65
LCA5-203ENST00000467898 KMT5BQ4FZB7 885 aa10.96□□□□□ -0.65
LCA5-203ENST00000467898 FMNL3Q8IVF7 1028 aa10.96□□□□□ -0.65
LCA5-203ENST00000467898 FAM212AQ96EL1 285 aa10.96□□□□□ -0.65
LCA5-203ENST00000467898 LRRFIP2Q9Y608 721 aaKnown RBP10.96□□□□□ -0.65
LCA5-203ENST00000467898 MBD3O95983 291 aa10.96□□□□□ -0.66
LCA5-203ENST00000467898 C1QTNF12Q5T7M4 302 aa10.96□□□□□ -0.66
LCA5-203ENST00000467898 INHBEP58166 350 aa10.95□□□□□ -0.66
LCA5-203ENST00000467898 PTPRCP08575 1304 aa10.95□□□□□ -0.66
LCA5-203ENST00000467898 SMC2O95347 1197 aa10.95□□□□□ -0.66
LCA5-203ENST00000467898 ADCY2Q08462 1091 aa10.95□□□□□ -0.66
LCA5-203ENST00000467898 NUTM1Q86Y26 1132 aa10.95□□□□□ -0.66
LCA5-203ENST00000467898 CCDC112Q8NEF3 446 aa10.95□□□□□ -0.66
LCA5-203ENST00000467898 GPT2Q8TD30 523 aa10.95□□□□□ -0.66
LCA5-203ENST00000467898 CABP2Q9NPB3 220 aa10.95□□□□□ -0.66
LCA5-203ENST00000467898 LCMT1Q9UIC8 334 aa10.95□□□□□ -0.66
LCA5-203ENST00000467898 AK7Q96M32 723 aa10.95□□□□□ -0.66
LCA5-203ENST00000467898 TSPY26PQ9H489 355 aa10.95□□□□□ -0.66
LCA5-203ENST00000467898 KLHL23Q8NBE8 558 aa10.94□□□□□ -0.66
LCA5-203ENST00000467898 PMFBP1Q8TBY8 1022 aa10.94□□□□□ -0.66
LCA5-203ENST00000467898 PRAM1Q96QH2 718 aa10.94□□□□□ -0.66
LCA5-203ENST00000467898 A1CFQ9NQ94 594 aaKnown RBP10.94□□□□□ -0.66
LCA5-203ENST00000467898 A0A1W2PP64 1363 aa10.94□□□□□ -0.66
LCA5-203ENST00000467898 ATP8B1O43520 1251 aa10.94□□□□□ -0.66
LCA5-203ENST00000467898 WDR43Q15061 677 aaKnown RBP eCLIP10.94□□□□□ -0.66
LCA5-203ENST00000467898 TATDN2Q93075 761 aa10.94□□□□□ -0.66
LCA5-203ENST00000467898 SENP3Q9H4L4 574 aaPredicted RBP10.94□□□□□ -0.66
LCA5-203ENST00000467898 NSD2O96028 1365 aa10.93□□□□□ -0.66
LCA5-203ENST00000467898 ABCC11Q96J66 1382 aa10.93□□□□□ -0.66
LCA5-203ENST00000467898 PAX7P23759 505 aa10.93□□□□□ -0.66
LCA5-203ENST00000467898 TRAF1Q13077 416 aa10.93□□□□□ -0.66
LCA5-203ENST00000467898 AP1ARQ63HQ0 302 aa10.93□□□□□ -0.66
LCA5-203ENST00000467898 MSL3Q8N5Y2 521 aaKnown RBP10.93□□□□□ -0.66
LCA5-203ENST00000467898 SYAP1Q96A49 352 aaPredicted RBP10.93□□□□□ -0.66
LCA5-203ENST00000467898 KIF20BQ96Q89 1820 aa10.93□□□□□ -0.66
LCA5-203ENST00000467898 SAFB2Q14151 953 aaKnown RBP eCLIP10.93□□□□□ -0.66
LCA5-203ENST00000467898 ZRSR1Q15695 479 aaKnown RBP10.93□□□□□ -0.66
LCA5-203ENST00000467898 CCDC27Q2M243 656 aa10.93□□□□□ -0.66
LCA5-203ENST00000467898 FAXDC2Q96IV6 333 aa10.93□□□□□ -0.66
LCA5-203ENST00000467898 C3P01024 1663 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms