RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 CTC1Q2NKJ3 1217 aa8.76□□□□□ -1.01
GAPVD1-211ENST00000467707 SLC27A3Q5K4L6 730 aa8.76□□□□□ -1.01
GAPVD1-211ENST00000467707 RGS22Q8NE09 1264 aa8.76□□□□□ -1.01
GAPVD1-211ENST00000467707 MYO19Q96H55 970 aa8.76□□□□□ -1.01
GAPVD1-211ENST00000467707 GRIP2Q9C0E4 1043 aa8.76□□□□□ -1.01
GAPVD1-211ENST00000467707 TUT1Q9H6E5 874 aaKnown RBP8.76□□□□□ -1.01
GAPVD1-211ENST00000467707 BIN2Q9UBW5 565 aaPredicted RBP8.76□□□□□ -1.01
GAPVD1-211ENST00000467707 EML1O00423 815 aa8.75□□□□□ -1.01
GAPVD1-211ENST00000467707 FAM13AO94988 1023 aa8.75□□□□□ -1.01
GAPVD1-211ENST00000467707 NPR3P17342 541 aa8.75□□□□□ -1.01
GAPVD1-211ENST00000467707 NOS2P35228 1153 aa8.75□□□□□ -1.01
GAPVD1-211ENST00000467707 TBCELQ5QJ74 424 aa8.75□□□□□ -1.01
GAPVD1-211ENST00000467707 ZNF295-AS1Q8N0V1 137 aa8.75□□□□□ -1.01
GAPVD1-211ENST00000467707 CABP1Q9NZU7 370 aa8.75□□□□□ -1.01
GAPVD1-211ENST00000467707 DNMT3AQ9Y6K1 912 aaPredicted RBP8.75□□□□□ -1.01
GAPVD1-211ENST00000467707 ZNF211Q13398 564 aaPredicted RBP8.74□□□□□ -1.01
GAPVD1-211ENST00000467707 WDR44Q5JSH3 913 aa8.74□□□□□ -1.01
GAPVD1-211ENST00000467707 C1orf53Q5VUE5 145 aa8.74□□□□□ -1.01
GAPVD1-211ENST00000467707 L3MBTL2Q969R5 705 aa8.74□□□□□ -1.01
GAPVD1-211ENST00000467707 ZNF232Q9UNY5 417 aa8.74□□□□□ -1.01
GAPVD1-211ENST00000467707 FAM187AA6NFU0 413 aa8.73□□□□□ -1.01
GAPVD1-211ENST00000467707 SPATA31C2B4DYI2 1134 aa8.73□□□□□ -1.01
GAPVD1-211ENST00000467707 DGAT1O75907 488 aa8.73□□□□□ -1.01
GAPVD1-211ENST00000467707 BMP2P12643 396 aa8.73□□□□□ -1.01
GAPVD1-211ENST00000467707 SMCPP49901 116 aaPredicted RBP8.73□□□□□ -1.01
GAPVD1-211ENST00000467707 NAA30Q147X3 362 aaPredicted RBP8.73□□□□□ -1.01
GAPVD1-211ENST00000467707 MRPL14Q6P1L8 145 aaKnown RBP8.73□□□□□ -1.01
GAPVD1-211ENST00000467707 CAPN12Q6ZSI9 719 aa8.73□□□□□ -1.01
GAPVD1-211ENST00000467707 INSM2Q96T92 566 aaPredicted RBP8.73□□□□□ -1.01
GAPVD1-211ENST00000467707 POLMQ9NP87 494 aaPredicted RBP8.73□□□□□ -1.01
GAPVD1-211ENST00000467707 AMOTL2Q9Y2J4 779 aa8.73□□□□□ -1.01
GAPVD1-211ENST00000467707 GPC6Q9Y625 555 aaPredicted RBP8.73□□□□□ -1.01
GAPVD1-211ENST00000467707 USP3Q9Y6I4 520 aa8.73□□□□□ -1.01
GAPVD1-211ENST00000467707 MARSP56192 900 aaKnown RBP8.72□□□□□ -1.01
GAPVD1-211ENST00000467707 SCARF1Q14162 830 aa8.72□□□□□ -1.01
GAPVD1-211ENST00000467707 LAPTM4AQ15012 233 aa8.72□□□□□ -1.01
GAPVD1-211ENST00000467707 HIF1AQ16665 826 aa8.72□□□□□ -1.01
GAPVD1-211ENST00000467707 RTN1Q16799 776 aa8.72□□□□□ -1.01
GAPVD1-211ENST00000467707 NBPF1Q3BBV0 1214 aa8.72□□□□□ -1.01
GAPVD1-211ENST00000467707 ALKBH2Q6NS38 261 aa8.72□□□□□ -1.01
GAPVD1-211ENST00000467707 ABTB2Q8N961 1025 aa8.72□□□□□ -1.01
GAPVD1-211ENST00000467707 NRG2O14511 850 aaPredicted RBP8.71□□□□□ -1.02
GAPVD1-211ENST00000467707 ZDHHC1Q8WTX9 485 aa8.71□□□□□ -1.02
GAPVD1-211ENST00000467707 QTRT2Q9H974 415 aaKnown RBP8.71□□□□□ -1.02
GAPVD1-211ENST00000467707 STIM2Q9P246 746 aa8.71□□□□□ -1.02
GAPVD1-211ENST00000467707 BRD2P25440 801 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-211ENST00000467707 PKDCCQ504Y2 493 aa8.7□□□□□ -1.02
GAPVD1-211ENST00000467707 COX20Q5RI15 118 aa8.7□□□□□ -1.02
GAPVD1-211ENST00000467707 ALDH16A1Q8IZ83 802 aa8.7□□□□□ -1.02
GAPVD1-211ENST00000467707 CRIPAKQ8N1N5 446 aa8.7□□□□□ -1.02
GAPVD1-211ENST00000467707 ANO2Q9NQ90 1003 aa8.7□□□□□ -1.02
GAPVD1-211ENST00000467707 ZDHHC3Q9NYG2 299 aa8.7□□□□□ -1.02
GAPVD1-211ENST00000467707 CTSOP43234 321 aaPredicted RBP8.69□□□□□ -1.02
GAPVD1-211ENST00000467707 FOXD4L5Q5VV16 416 aaPredicted RBP8.69□□□□□ -1.02
GAPVD1-211ENST00000467707 LYSMD3Q7Z3D4 306 aa8.69□□□□□ -1.02
GAPVD1-211ENST00000467707 RNF217Q8TC41 542 aa8.69□□□□□ -1.02
GAPVD1-211ENST00000467707 DCTN4Q9UJW0 460 aa8.69□□□□□ -1.02
GAPVD1-211ENST00000467707 TATP17735 454 aaPredicted RBP8.68□□□□□ -1.02
GAPVD1-211ENST00000467707 ARHGAP4P98171 946 aa8.68□□□□□ -1.02
GAPVD1-211ENST00000467707 C11orf91Q3C1V1 193 aa8.68□□□□□ -1.02
GAPVD1-211ENST00000467707 C4orf17Q53FE4 359 aa8.68□□□□□ -1.02
GAPVD1-211ENST00000467707 ZSCAN29Q8IWY8 852 aaPredicted RBP8.68□□□□□ -1.02
GAPVD1-211ENST00000467707 PHACTR1Q9C0D0 580 aa8.68□□□□□ -1.02
GAPVD1-211ENST00000467707 SAP130Q9H0E3 1048 aa8.68□□□□□ -1.02
GAPVD1-211ENST00000467707 TTLL8A6PVC2 850 aa8.67□□□□□ -1.02
GAPVD1-211ENST00000467707 PLA2G4AP47712 749 aa8.67□□□□□ -1.02
GAPVD1-211ENST00000467707 MTMR3Q13615 1198 aa8.67□□□□□ -1.02
GAPVD1-211ENST00000467707 ECM1Q16610 540 aa8.67□□□□□ -1.02
GAPVD1-211ENST00000467707 C6orf118Q5T5N4 469 aa8.67□□□□□ -1.02
GAPVD1-211ENST00000467707 NBPF10Q6P3W6 841 aaKnown RBP8.67□□□□□ -1.02
GAPVD1-211ENST00000467707 DNAJC14Q6Y2X3 702 aaPredicted RBP8.67□□□□□ -1.02
GAPVD1-211ENST00000467707 NGLY1Q96IV0 654 aa8.67□□□□□ -1.02
GAPVD1-211ENST00000467707 CITED4Q96RK1 184 aa8.67□□□□□ -1.02
GAPVD1-211ENST00000467707 HCN4Q9Y3Q4 1203 aa8.67□□□□□ -1.02
GAPVD1-211ENST00000467707 TNFRSF10BO14763 440 aa8.66□□□□□ -1.02
GAPVD1-211ENST00000467707 AXIN1O15169 862 aa8.66□□□□□ -1.02
GAPVD1-211ENST00000467707 NDUFB5O43674 189 aa8.66□□□□□ -1.02
GAPVD1-211ENST00000467707 MPSTP25325 297 aa8.66□□□□□ -1.02
GAPVD1-211ENST00000467707 NOM1Q5C9Z4 860 aaKnown RBP8.66□□□□□ -1.02
GAPVD1-211ENST00000467707 NPM2Q86SE8 214 aaKnown RBP8.66□□□□□ -1.02
GAPVD1-211ENST00000467707 LRFN2Q9ULH4 789 aa8.66□□□□□ -1.02
GAPVD1-211ENST00000467707 PARP3Q9Y6F1 533 aa8.66□□□□□ -1.02
GAPVD1-211ENST00000467707 A0A1B0GTH6 734 aa8.65□□□□□ -1.02
GAPVD1-211ENST00000467707 GFRA3O60609 400 aa8.65□□□□□ -1.02
GAPVD1-211ENST00000467707 MAPK1P28482 360 aa8.65□□□□□ -1.02
GAPVD1-211ENST00000467707 SH3PXD2AQ5TCZ1 1133 aa8.65□□□□□ -1.02
GAPVD1-211ENST00000467707 ASB16Q96NS5 453 aa8.65□□□□□ -1.02
GAPVD1-211ENST00000467707 SOS2Q07890 1332 aaPredicted RBP8.64□□□□□ -1.03
GAPVD1-211ENST00000467707 EIF1AXP47813 144 aaKnown RBP8.64□□□□□ -1.03
GAPVD1-211ENST00000467707 DGKZQ13574 1117 aa8.64□□□□□ -1.03
GAPVD1-211ENST00000467707 RHPN1Q8TCX5 695 aa8.64□□□□□ -1.03
GAPVD1-211ENST00000467707 AIDAQ96BJ3 306 aa8.64□□□□□ -1.03
GAPVD1-211ENST00000467707 RBCK1Q9BYM8 510 aa8.64□□□□□ -1.03
GAPVD1-211ENST00000467707 FAM13BQ9NYF5 915 aa8.64□□□□□ -1.03
GAPVD1-211ENST00000467707 ANKIB1Q9P2G1 1089 aa8.64□□□□□ -1.03
GAPVD1-211ENST00000467707 BRPF3Q9ULD4 1205 aa8.64□□□□□ -1.03
GAPVD1-211ENST00000467707 TXLNAP40222 546 aa8.63□□□□□ -1.03
GAPVD1-211ENST00000467707 USP5P45974 858 aa8.63□□□□□ -1.03
GAPVD1-211ENST00000467707 POU4F2Q12837 409 aa8.63□□□□□ -1.03
GAPVD1-211ENST00000467707 COL19A1Q14993 1142 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms