RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 POLRMTO00411 1230 aaKnown RBP19.81■□□□□ 0.76
ATPAF2-204ENST00000467560 U2AF1L5P0DN76 240 aaPredicted RBP19.81■□□□□ 0.76
ATPAF2-204ENST00000467560 U2AF1Q01081 240 aaKnown RBP eCLIP19.81■□□□□ 0.76
ATPAF2-204ENST00000467560 TEFQ10587 303 aa19.81■□□□□ 0.76
ATPAF2-204ENST00000467560 ZNF790Q6PG37 636 aa19.81■□□□□ 0.76
ATPAF2-204ENST00000467560 COL15A1P39059 1388 aa19.81■□□□□ 0.76
ATPAF2-204ENST00000467560 SIPA1L3O60292 1781 aaPredicted RBP19.8■□□□□ 0.76
ATPAF2-204ENST00000467560 CANXP27824 592 aaKnown RBP19.8■□□□□ 0.76
ATPAF2-204ENST00000467560 BCS1LQ9Y276 419 aa19.8■□□□□ 0.76
ATPAF2-204ENST00000467560 ZPR1O75312 459 aa19.79■□□□□ 0.76
ATPAF2-204ENST00000467560 GIGYF1O75420 1035 aaPredicted RBP19.79■□□□□ 0.76
ATPAF2-204ENST00000467560 TTC5Q8N0Z6 440 aa19.79■□□□□ 0.76
ATPAF2-204ENST00000467560 NARFQ9UHQ1 456 aa19.79■□□□□ 0.76
ATPAF2-204ENST00000467560 NFIXQ14938 502 aa19.78■□□□□ 0.76
ATPAF2-204ENST00000467560 HEG1Q9ULI3 1381 aa19.78■□□□□ 0.76
ATPAF2-204ENST00000467560 CHRNA5P30532 468 aa19.77■□□□□ 0.76
ATPAF2-204ENST00000467560 EIF5P55010 431 aaKnown RBP19.77■□□□□ 0.76
ATPAF2-204ENST00000467560 MCM10Q7L590 875 aa19.77■□□□□ 0.76
ATPAF2-204ENST00000467560 ZNF526Q8TF50 670 aaPredicted RBP19.77■□□□□ 0.76
ATPAF2-204ENST00000467560 NUDCQ9Y266 331 aa19.77■□□□□ 0.76
ATPAF2-204ENST00000467560 DCTN1Q14203 1278 aa19.76■□□□□ 0.75
ATPAF2-204ENST00000467560 BRCA1P38398 1863 aaKnown RBP19.75■□□□□ 0.75
ATPAF2-204ENST00000467560 FCHSD2O94868 740 aa19.75■□□□□ 0.75
ATPAF2-204ENST00000467560 STARD3NLO95772 234 aa19.75■□□□□ 0.75
ATPAF2-204ENST00000467560 PRAMEF22A3QJZ6 481 aa19.74■□□□□ 0.75
ATPAF2-204ENST00000467560 BTBD11A6QL63 1104 aa19.74■□□□□ 0.75
ATPAF2-204ENST00000467560 A1BGP04217 495 aa19.74■□□□□ 0.75
ATPAF2-204ENST00000467560 ARHGAP27Q6ZUM4 889 aa19.73■□□□□ 0.75
ATPAF2-204ENST00000467560 FMNL2Q96PY5 1086 aa19.73■□□□□ 0.75
ATPAF2-204ENST00000467560 CEP350Q5VT06 3117 aa19.73■□□□□ 0.75
ATPAF2-204ENST00000467560 SENP3-EIF4A1A0A087X0R7 540 aa19.72■□□□□ 0.75
ATPAF2-204ENST00000467560 GPBP1L1Q9HC44 474 aaPredicted RBP19.72■□□□□ 0.75
ATPAF2-204ENST00000467560 PIM2Q9P1W9 311 aa19.72■□□□□ 0.75
ATPAF2-204ENST00000467560 CARMIL3Q8ND23 1372 aa19.71■□□□□ 0.75
ATPAF2-204ENST00000467560 PIP4K2AP48426 406 aaPredicted RBP19.71■□□□□ 0.75
ATPAF2-204ENST00000467560 BICDL1Q6ZP65 573 aa19.71■□□□□ 0.75
ATPAF2-204ENST00000467560 TBC1D2BQ9UPU7 963 aa19.71■□□□□ 0.75
ATPAF2-204ENST00000467560 USP16Q9Y5T5 823 aa19.71■□□□□ 0.75
ATPAF2-204ENST00000467560 AFDNP55196 1824 aaKnown RBP19.71■□□□□ 0.75
ATPAF2-204ENST00000467560 SERPINB2P05120 415 aa19.7■□□□□ 0.74
ATPAF2-204ENST00000467560 TBC1D9BQ66K14 1250 aa19.7■□□□□ 0.74
ATPAF2-204ENST00000467560 TEX13AQ9BXU3 409 aaPredicted RBP19.7■□□□□ 0.74
ATPAF2-204ENST00000467560 ZNF330Q9Y3S2 320 aaPredicted RBP19.7■□□□□ 0.74
ATPAF2-204ENST00000467560 NRXN2Q9P2S2 1712 aa19.7■□□□□ 0.74
ATPAF2-204ENST00000467560 DALRD3Q5D0E6 543 aaKnown RBP19.69■□□□□ 0.74
ATPAF2-204ENST00000467560 RTF1Q92541 710 aaKnown RBP19.69■□□□□ 0.74
ATPAF2-204ENST00000467560 IL6STP40189 918 aaPredicted RBP19.68■□□□□ 0.74
ATPAF2-204ENST00000467560 PLEKHF1Q96S99 279 aa19.68■□□□□ 0.74
ATPAF2-204ENST00000467560 MIS18AQ9NYP9 233 aa19.68■□□□□ 0.74
ATPAF2-204ENST00000467560 A0A087WZG4 1122 aa19.67■□□□□ 0.74
ATPAF2-204ENST00000467560 CCDC24Q8N4L8 307 aa19.67■□□□□ 0.74
ATPAF2-204ENST00000467560 KIF3CO14782 793 aa19.66■□□□□ 0.74
ATPAF2-204ENST00000467560 HTATSF1O43719 755 aaKnown RBP19.66■□□□□ 0.74
ATPAF2-204ENST00000467560 CAMTA2O94983 1202 aa19.66■□□□□ 0.74
ATPAF2-204ENST00000467560 ARFGEF1Q9Y6D6 1849 aa19.66■□□□□ 0.74
ATPAF2-204ENST00000467560 SCN7AQ01118 1682 aa19.65■□□□□ 0.74
ATPAF2-204ENST00000467560 C9orf131Q5VYM1 1079 aa19.65■□□□□ 0.74
ATPAF2-204ENST00000467560 NBPF26B4DH59 902 aa19.64■□□□□ 0.73
ATPAF2-204ENST00000467560 SNRPA1P09661 255 aaKnown RBP19.64■□□□□ 0.73
ATPAF2-204ENST00000467560 NBPF10Q6P3W6 841 aaKnown RBP19.64■□□□□ 0.73
ATPAF2-204ENST00000467560 NBPF15Q8N660 670 aa19.64■□□□□ 0.73
ATPAF2-204ENST00000467560 THUMPD2Q9BTF0 503 aaKnown RBP19.64■□□□□ 0.73
ATPAF2-204ENST00000467560 TAF7Q15545 349 aaPredicted RBP19.63■□□□□ 0.73
ATPAF2-204ENST00000467560 PRR5LQ6MZQ0 368 aa19.63■□□□□ 0.73
ATPAF2-204ENST00000467560 C2CD5Q86YS7 1000 aa19.63■□□□□ 0.73
ATPAF2-204ENST00000467560 PRELPP51888 382 aa19.62■□□□□ 0.73
ATPAF2-204ENST00000467560 RASSF7Q02833 373 aa19.61■□□□□ 0.73
ATPAF2-204ENST00000467560 DDX10Q13206 875 aaKnown RBP19.61■□□□□ 0.73
ATPAF2-204ENST00000467560 NFE2L2Q16236 605 aa19.61■□□□□ 0.73
ATPAF2-204ENST00000467560 DZIP3Q86Y13 1208 aaKnown RBP19.61■□□□□ 0.73
ATPAF2-204ENST00000467560 ANKRD31Q8N7Z5 1873 aa19.6■□□□□ 0.73
ATPAF2-204ENST00000467560 NMRK2Q9NPI5 230 aa19.6■□□□□ 0.73
ATPAF2-204ENST00000467560 DLG5Q8TDM6 1919 aa19.6■□□□□ 0.73
ATPAF2-204ENST00000467560 RNF181Q9P0P0 153 aa19.59■□□□□ 0.73
ATPAF2-204ENST00000467560 DLEC1Q9Y238 1755 aa19.59■□□□□ 0.73
ATPAF2-204ENST00000467560 BCORQ6W2J9 1755 aa19.58■□□□□ 0.73
ATPAF2-204ENST00000467560 H0YIN7 160 aa19.58■□□□□ 0.72
ATPAF2-204ENST00000467560 TTLL6Q8N841 843 aa19.58■□□□□ 0.72
ATPAF2-204ENST00000467560 SETDB2Q96T68 719 aa19.58■□□□□ 0.72
ATPAF2-204ENST00000467560 BRIP1Q9BX63 1249 aa19.58■□□□□ 0.72
ATPAF2-204ENST00000467560 COL11A2P13942 1736 aaPredicted RBP19.57■□□□□ 0.72
ATPAF2-204ENST00000467560 RALBP1Q15311 655 aa19.57■□□□□ 0.72
ATPAF2-204ENST00000467560 EIF4A1P60842 406 aaKnown RBP19.56■□□□□ 0.72
ATPAF2-204ENST00000467560 NPM2Q86SE8 214 aaKnown RBP19.56■□□□□ 0.72
ATPAF2-204ENST00000467560 KDM3BQ7LBC6 1761 aa19.56■□□□□ 0.72
ATPAF2-204ENST00000467560 NFKBIEO00221 500 aa19.55■□□□□ 0.72
ATPAF2-204ENST00000467560 SBF1O95248 1867 aa19.55■□□□□ 0.72
ATPAF2-204ENST00000467560 HLFQ16534 295 aa19.55■□□□□ 0.72
ATPAF2-204ENST00000467560 CNBD1Q8NA66 436 aa19.55■□□□□ 0.72
ATPAF2-204ENST00000467560 NEFMP07197 916 aa19.54■□□□□ 0.72
ATPAF2-204ENST00000467560 PDE6BP35913 854 aa19.54■□□□□ 0.72
ATPAF2-204ENST00000467560 ZNF622Q969S3 477 aaKnown RBP eCLIP19.54■□□□□ 0.72
ATPAF2-204ENST00000467560 ZNF219Q9P2Y4 722 aaPredicted RBP19.54■□□□□ 0.72
ATPAF2-204ENST00000467560 MAPK8IP3Q9UPT6 1336 aa19.53■□□□□ 0.72
ATPAF2-204ENST00000467560 HSPA6P17066 643 aa19.53■□□□□ 0.72
ATPAF2-204ENST00000467560 CLEC4GQ6UXB4 293 aa19.53■□□□□ 0.72
ATPAF2-204ENST00000467560 NGEFQ8N5V2 710 aa19.52■□□□□ 0.72
ATPAF2-204ENST00000467560 PNISRQ8TF01 805 aaKnown RBP19.52■□□□□ 0.72
ATPAF2-204ENST00000467560 C21orf2O43822 256 aa19.51■□□□□ 0.71
ATPAF2-204ENST00000467560 RIPK4P57078 832 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms