RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 STARD3NLO95772 234 aa18.72■□□□□ 0.59
CCHCR1-211ENST00000467553 DPEP1P16444 411 aa18.72■□□□□ 0.59
CCHCR1-211ENST00000467553 SLC39A6Q13433 755 aa18.72■□□□□ 0.59
CCHCR1-211ENST00000467553 RSPH6AQ9H0K4 717 aa18.72■□□□□ 0.59
CCHCR1-211ENST00000467553 PIM2Q9P1W9 311 aa18.72■□□□□ 0.59
CCHCR1-211ENST00000467553 NARFQ9UHQ1 456 aa18.72■□□□□ 0.59
CCHCR1-211ENST00000467553 UBR2Q8IWV8 1755 aa18.72■□□□□ 0.59
CCHCR1-211ENST00000467553 FCHSD2O94868 740 aa18.71■□□□□ 0.59
CCHCR1-211ENST00000467553 TEFQ10587 303 aa18.71■□□□□ 0.59
CCHCR1-211ENST00000467553 PHACTR3Q96KR7 559 aa18.71■□□□□ 0.59
CCHCR1-211ENST00000467553 SRP68Q9UHB9 627 aaKnown RBP18.71■□□□□ 0.59
CCHCR1-211ENST00000467553 A0A087WZG4 1122 aa18.7■□□□□ 0.58
CCHCR1-211ENST00000467553 POLRMTO00411 1230 aaKnown RBP18.7■□□□□ 0.58
CCHCR1-211ENST00000467553 KCNA3P22001 575 aa18.7■□□□□ 0.58
CCHCR1-211ENST00000467553 WWC3Q9ULE0 1092 aa18.7■□□□□ 0.58
CCHCR1-211ENST00000467553 COL15A1P39059 1388 aa18.69■□□□□ 0.58
CCHCR1-211ENST00000467553 DDR1Q08345 913 aa18.69■□□□□ 0.58
CCHCR1-211ENST00000467553 USPL1Q5W0Q7 1092 aa18.69■□□□□ 0.58
CCHCR1-211ENST00000467553 ARHGAP27Q6ZUM4 889 aa18.69■□□□□ 0.58
CCHCR1-211ENST00000467553 DALRD3Q5D0E6 543 aaKnown RBP18.68■□□□□ 0.58
CCHCR1-211ENST00000467553 ZNF790Q6PG37 636 aa18.68■□□□□ 0.58
CCHCR1-211ENST00000467553 CEP350Q5VT06 3117 aa18.67■□□□□ 0.58
CCHCR1-211ENST00000467553 IL17REQ8NFR9 667 aa18.67■□□□□ 0.58
CCHCR1-211ENST00000467553 ZBTB1Q9Y2K1 713 aa18.67■□□□□ 0.58
CCHCR1-211ENST00000467553 SIPA1L3O60292 1781 aaPredicted RBP18.67■□□□□ 0.58
CCHCR1-211ENST00000467553 MYBBP1AQ9BQG0 1328 aaKnown RBP18.67■□□□□ 0.58
CCHCR1-211ENST00000467553 CEMIPQ8WUJ3 1361 aa18.67■□□□□ 0.58
CCHCR1-211ENST00000467553 HEG1Q9ULI3 1381 aa18.66■□□□□ 0.58
CCHCR1-211ENST00000467553 NRXN2Q9P2S2 1712 aa18.66■□□□□ 0.58
CCHCR1-211ENST00000467553 NEFMP07197 916 aa18.65■□□□□ 0.58
CCHCR1-211ENST00000467553 EIF5P55010 431 aaKnown RBP18.65■□□□□ 0.58
CCHCR1-211ENST00000467553 ZNF526Q8TF50 670 aaPredicted RBP18.65■□□□□ 0.58
CCHCR1-211ENST00000467553 FMNL2Q96PY5 1086 aa18.65■□□□□ 0.58
CCHCR1-211ENST00000467553 PRKRIP1Q9H875 184 aaPredicted RBP18.65■□□□□ 0.58
CCHCR1-211ENST00000467553 PDZRN3Q9UPQ7 1066 aa18.65■□□□□ 0.58
CCHCR1-211ENST00000467553 NFIXQ14938 502 aa18.64■□□□□ 0.57
CCHCR1-211ENST00000467553 AFDNP55196 1824 aaKnown RBP18.63■□□□□ 0.57
CCHCR1-211ENST00000467553 HSPA6P17066 643 aa18.63■□□□□ 0.57
CCHCR1-211ENST00000467553 IL6STP40189 918 aaPredicted RBP18.63■□□□□ 0.57
CCHCR1-211ENST00000467553 ZNF496Q96IT1 587 aaPredicted RBP18.63■□□□□ 0.57
CCHCR1-211ENST00000467553 KIF3CO14782 793 aa18.62■□□□□ 0.57
CCHCR1-211ENST00000467553 HTATSF1O43719 755 aaKnown RBP18.62■□□□□ 0.57
CCHCR1-211ENST00000467553 SERPINB2P05120 415 aa18.62■□□□□ 0.57
CCHCR1-211ENST00000467553 CANXP27824 592 aaKnown RBP18.62■□□□□ 0.57
CCHCR1-211ENST00000467553 NPM2Q86SE8 214 aaKnown RBP18.62■□□□□ 0.57
CCHCR1-211ENST00000467553 RTF1Q92541 710 aaKnown RBP18.62■□□□□ 0.57
CCHCR1-211ENST00000467553 PNNQ9H307 717 aaKnown RBP18.62■□□□□ 0.57
CCHCR1-211ENST00000467553 BCL2L12Q9HB09 334 aa18.62■□□□□ 0.57
CCHCR1-211ENST00000467553 BTBD11A6QL63 1104 aa18.61■□□□□ 0.57
CCHCR1-211ENST00000467553 ZC3H4Q9UPT8 1303 aaKnown RBP18.6■□□□□ 0.57
CCHCR1-211ENST00000467553 TOMM70O94826 608 aa18.6■□□□□ 0.57
CCHCR1-211ENST00000467553 C9orf131Q5VYM1 1079 aa18.6■□□□□ 0.57
CCHCR1-211ENST00000467553 CHRNA5P30532 468 aa18.59■□□□□ 0.57
CCHCR1-211ENST00000467553 PLEKHF1Q96S99 279 aa18.59■□□□□ 0.57
CCHCR1-211ENST00000467553 DLEC1Q9Y238 1755 aa18.59■□□□□ 0.57
CCHCR1-211ENST00000467553 H0YIN7 160 aa18.58■□□□□ 0.56
CCHCR1-211ENST00000467553 DCTN1Q14203 1278 aa18.58■□□□□ 0.56
CCHCR1-211ENST00000467553 MCM10Q7L590 875 aa18.58■□□□□ 0.56
CCHCR1-211ENST00000467553 SBF1O95248 1867 aa18.58■□□□□ 0.56
CCHCR1-211ENST00000467553 KDM2BQ8NHM5 1336 aa18.57■□□□□ 0.56
CCHCR1-211ENST00000467553 MAPK8IP3Q9UPT6 1336 aa18.57■□□□□ 0.56
CCHCR1-211ENST00000467553 RGL2O15211 777 aa18.57■□□□□ 0.56
CCHCR1-211ENST00000467553 WDR43Q15061 677 aaKnown RBP eCLIP18.57■□□□□ 0.56
CCHCR1-211ENST00000467553 TTLL6Q8N841 843 aa18.57■□□□□ 0.56
CCHCR1-211ENST00000467553 PDE6BP35913 854 aa18.56■□□□□ 0.56
CCHCR1-211ENST00000467553 BRIP1Q9BX63 1249 aa18.56■□□□□ 0.56
CCHCR1-211ENST00000467553 SCN7AQ01118 1682 aa18.56■□□□□ 0.56
CCHCR1-211ENST00000467553 CARMIL3Q8ND23 1372 aa18.55■□□□□ 0.56
CCHCR1-211ENST00000467553 CLEC4GQ6UXB4 293 aa18.55■□□□□ 0.56
CCHCR1-211ENST00000467553 C2CD5Q86YS7 1000 aa18.55■□□□□ 0.56
CCHCR1-211ENST00000467553 SETDB2Q96T68 719 aa18.55■□□□□ 0.56
CCHCR1-211ENST00000467553 RNF181Q9P0P0 153 aa18.55■□□□□ 0.56
CCHCR1-211ENST00000467553 SNRPA1P09661 255 aaKnown RBP18.54■□□□□ 0.56
CCHCR1-211ENST00000467553 APLP1P51693 650 aa18.54■□□□□ 0.56
CCHCR1-211ENST00000467553 NFE2L2Q16236 605 aa18.54■□□□□ 0.56
CCHCR1-211ENST00000467553 RBM46Q8TBY0 533 aaKnown RBP18.54■□□□□ 0.56
CCHCR1-211ENST00000467553 A1BGP04217 495 aa18.53■□□□□ 0.56
CCHCR1-211ENST00000467553 TBC1D9BQ66K14 1250 aa18.53■□□□□ 0.56
CCHCR1-211ENST00000467553 CCDC146Q8IYE0 955 aa18.53■□□□□ 0.56
CCHCR1-211ENST00000467553 C16orf71Q8IYS4 520 aaPredicted RBP18.53■□□□□ 0.56
CCHCR1-211ENST00000467553 ADAMTS8Q9UP79 889 aa18.53■□□□□ 0.56
CCHCR1-211ENST00000467553 TBC1D2BQ9UPU7 963 aa18.53■□□□□ 0.56
CCHCR1-211ENST00000467553 DLG5Q8TDM6 1919 aa18.53■□□□□ 0.56
CCHCR1-211ENST00000467553 ANP32CO43423 234 aa18.52■□□□□ 0.56
CCHCR1-211ENST00000467553 KCNQ3O43525 872 aa18.52■□□□□ 0.56
CCHCR1-211ENST00000467553 LMNB1P20700 586 aa18.52■□□□□ 0.56
CCHCR1-211ENST00000467553 TAF7Q15545 349 aaPredicted RBP18.52■□□□□ 0.56
CCHCR1-211ENST00000467553 BICDL1Q6ZP65 573 aa18.52■□□□□ 0.56
CCHCR1-211ENST00000467553 ZNF652Q9Y2D9 606 aa18.52■□□□□ 0.56
CCHCR1-211ENST00000467553 ZNF330Q9Y3S2 320 aaPredicted RBP18.52■□□□□ 0.56
CCHCR1-211ENST00000467553 CAMTA2O94983 1202 aa18.51■□□□□ 0.55
CCHCR1-211ENST00000467553 RIPK4P57078 832 aa18.51■□□□□ 0.55
CCHCR1-211ENST00000467553 FSTL1Q12841 308 aa18.51■□□□□ 0.55
CCHCR1-211ENST00000467553 DZIP3Q86Y13 1208 aaKnown RBP18.51■□□□□ 0.55
CCHCR1-211ENST00000467553 PNISRQ8TF01 805 aaKnown RBP18.51■□□□□ 0.55
CCHCR1-211ENST00000467553 NMRK2Q9NPI5 230 aa18.51■□□□□ 0.55
CCHCR1-211ENST00000467553 USP16Q9Y5T5 823 aa18.51■□□□□ 0.55
CCHCR1-211ENST00000467553 TNRC6CQ9HCJ0 1690 aaKnown RBP18.5■□□□□ 0.55
CCHCR1-211ENST00000467553 BCORQ6W2J9 1755 aa18.5■□□□□ 0.55
CCHCR1-211ENST00000467553 ST5P78524 1137 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms