RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CRKLP46109 303 aaKnown RBP14.37□□□□□ -0.11
HDAC3-203ENST00000467533 TTLL6Q8N841 843 aa14.37□□□□□ -0.11
HDAC3-203ENST00000467533 EMILIN1Q9Y6C2 1016 aa14.37□□□□□ -0.11
HDAC3-203ENST00000467533 PPM1GO15355 546 aaPredicted RBP14.36□□□□□ -0.11
HDAC3-203ENST00000467533 FER1L6Q2WGJ9 1857 aa14.35□□□□□ -0.11
HDAC3-203ENST00000467533 TMEM88BA6NKF7 163 aa14.35□□□□□ -0.11
HDAC3-203ENST00000467533 ERFEQ4G0M1 354 aa14.35□□□□□ -0.11
HDAC3-203ENST00000467533 PASKQ96RG2 1323 aa14.35□□□□□ -0.11
HDAC3-203ENST00000467533 SCN4AP35499 1836 aa14.34□□□□□ -0.11
HDAC3-203ENST00000467533 CACNA1SQ13698 1873 aa14.34□□□□□ -0.11
HDAC3-203ENST00000467533 ERVV-2B6SEH9 535 aa14.34□□□□□ -0.11
HDAC3-203ENST00000467533 PTCD1O75127 700 aaKnown RBP14.34□□□□□ -0.11
HDAC3-203ENST00000467533 ZPR1O75312 459 aa14.34□□□□□ -0.11
HDAC3-203ENST00000467533 TM4SF1P30408 202 aa14.34□□□□□ -0.11
HDAC3-203ENST00000467533 C2CD5Q86YS7 1000 aa14.34□□□□□ -0.11
HDAC3-203ENST00000467533 EYA1Q99502 592 aa14.34□□□□□ -0.11
HDAC3-203ENST00000467533 RGS19P49795 217 aa14.33□□□□□ -0.12
HDAC3-203ENST00000467533 USPL1Q5W0Q7 1092 aa14.33□□□□□ -0.12
HDAC3-203ENST00000467533 LDHDQ86WU2 507 aa14.33□□□□□ -0.12
HDAC3-203ENST00000467533 CFAP44Q96MT7 982 aa14.33□□□□□ -0.12
HDAC3-203ENST00000467533 COL11A2P13942 1736 aaPredicted RBP14.32□□□□□ -0.12
HDAC3-203ENST00000467533 DDNO94850 711 aaPredicted RBP14.32□□□□□ -0.12
HDAC3-203ENST00000467533 CABP4P57796 275 aa14.32□□□□□ -0.12
HDAC3-203ENST00000467533 ZNF219Q9P2Y4 722 aaPredicted RBP14.32□□□□□ -0.12
HDAC3-203ENST00000467533 THSD7BQ9C0I4 1608 aa14.32□□□□□ -0.12
HDAC3-203ENST00000467533 CARMIL3Q8ND23 1372 aa14.32□□□□□ -0.12
HDAC3-203ENST00000467533 IQCA1LA6NCM1 817 aa14.31□□□□□ -0.12
HDAC3-203ENST00000467533 H0YIN7 160 aa14.31□□□□□ -0.12
HDAC3-203ENST00000467533 HSP90AB1P08238 724 aaKnown RBP14.31□□□□□ -0.12
HDAC3-203ENST00000467533 MAP2K1Q02750 393 aaPredicted RBP14.31□□□□□ -0.12
HDAC3-203ENST00000467533 ANKRD31Q8N7Z5 1873 aa14.31□□□□□ -0.12
HDAC3-203ENST00000467533 NFIXQ14938 502 aa14.3□□□□□ -0.12
HDAC3-203ENST00000467533 TESK2Q96S53 571 aa14.3□□□□□ -0.12
HDAC3-203ENST00000467533 C21orf2O43822 256 aa14.29□□□□□ -0.12
HDAC3-203ENST00000467533 SERPINB2P05120 415 aa14.29□□□□□ -0.12
HDAC3-203ENST00000467533 DEFB115Q30KQ5 88 aa14.29□□□□□ -0.12
HDAC3-203ENST00000467533 EAPPQ56P03 285 aaPredicted RBP14.29□□□□□ -0.12
HDAC3-203ENST00000467533 WASHC2AQ641Q2 1341 aa14.29□□□□□ -0.12
HDAC3-203ENST00000467533 ADAMTSL1Q8N6G6 1762 aa14.29□□□□□ -0.12
HDAC3-203ENST00000467533 ST20-MTHFSA0A0A6YYL1 179 aa14.28□□□□□ -0.12
HDAC3-203ENST00000467533 RASSF10A6NK89 507 aa14.28□□□□□ -0.12
HDAC3-203ENST00000467533 ZNF622Q969S3 477 aaKnown RBP eCLIP14.28□□□□□ -0.12
HDAC3-203ENST00000467533 WDR33Q9C0J8 1336 aaKnown RBP14.28□□□□□ -0.12
HDAC3-203ENST00000467533 TAOK3Q9H2K8 898 aa14.28□□□□□ -0.12
HDAC3-203ENST00000467533 ARFGEF2Q9Y6D5 1785 aa14.27□□□□□ -0.12
HDAC3-203ENST00000467533 COL15A1P39059 1388 aa14.27□□□□□ -0.12
HDAC3-203ENST00000467533 SOS1Q07889 1333 aaPredicted RBP14.27□□□□□ -0.12
HDAC3-203ENST00000467533 LTBP3Q9NS15 1303 aa14.27□□□□□ -0.12
HDAC3-203ENST00000467533 ZNF530Q6P9A1 599 aaPredicted RBP14.27□□□□□ -0.13
HDAC3-203ENST00000467533 INTS5Q6P9B9 1019 aaKnown RBP14.27□□□□□ -0.13
HDAC3-203ENST00000467533 BEGAINQ9BUH8 593 aa14.27□□□□□ -0.13
HDAC3-203ENST00000467533 TAF1DQ9H5J8 278 aaPredicted RBP14.27□□□□□ -0.13
HDAC3-203ENST00000467533 ABT1Q9ULW3 272 aaKnown RBP14.27□□□□□ -0.13
HDAC3-203ENST00000467533 CLEC11AQ9Y240 323 aa14.27□□□□□ -0.13
HDAC3-203ENST00000467533 TNRC18O15417 2968 aaPredicted RBP14.26□□□□□ -0.13
HDAC3-203ENST00000467533 SLC24A1O60721 1099 aa14.26□□□□□ -0.13
HDAC3-203ENST00000467533 ITGBL1O95965 494 aaPredicted RBP14.26□□□□□ -0.13
HDAC3-203ENST00000467533 SCN11AQ9UI33 1791 aa14.25□□□□□ -0.13
HDAC3-203ENST00000467533 LTBP1Q14766 1721 aa14.25□□□□□ -0.13
HDAC3-203ENST00000467533 PAXIP1Q6ZW49 1069 aaPredicted RBP14.25□□□□□ -0.13
HDAC3-203ENST00000467533 NARFQ9UHQ1 456 aa14.25□□□□□ -0.13
HDAC3-203ENST00000467533 PLEKHO1Q53GL0 409 aaPredicted RBP14.24□□□□□ -0.13
HDAC3-203ENST00000467533 DNAJC10Q8IXB1 793 aa14.24□□□□□ -0.13
HDAC3-203ENST00000467533 L3MBTL3Q96JM7 780 aaPredicted RBP14.24□□□□□ -0.13
HDAC3-203ENST00000467533 SCN7AQ01118 1682 aa14.23□□□□□ -0.13
HDAC3-203ENST00000467533 SLX4Q8IY92 1834 aa14.23□□□□□ -0.13
HDAC3-203ENST00000467533 MTHFSP49914 203 aa14.23□□□□□ -0.13
HDAC3-203ENST00000467533 GRM1Q13255 1194 aa14.23□□□□□ -0.13
HDAC3-203ENST00000467533 EIF4A2Q14240 407 aaKnown RBP14.23□□□□□ -0.13
HDAC3-203ENST00000467533 C1orf141Q5JVX7 400 aa14.23□□□□□ -0.13
HDAC3-203ENST00000467533 BICDL1Q6ZP65 573 aa14.23□□□□□ -0.13
HDAC3-203ENST00000467533 NFATC2IPQ8NCF5 419 aa14.23□□□□□ -0.13
HDAC3-203ENST00000467533 PDE6BP35913 854 aa14.22□□□□□ -0.13
HDAC3-203ENST00000467533 BCL2L12Q9HB09 334 aa14.22□□□□□ -0.13
HDAC3-203ENST00000467533 HACL1Q9UJ83 578 aa14.22□□□□□ -0.13
HDAC3-203ENST00000467533 PDZRN3Q9UPQ7 1066 aa14.22□□□□□ -0.13
HDAC3-203ENST00000467533 EPHX2P34913 555 aa14.21□□□□□ -0.13
HDAC3-203ENST00000467533 MAP1SQ66K74 1059 aaPredicted RBP14.21□□□□□ -0.13
HDAC3-203ENST00000467533 CNTROBQ8N137 903 aa14.21□□□□□ -0.13
HDAC3-203ENST00000467533 MCOLN1Q9GZU1 580 aa14.21□□□□□ -0.13
HDAC3-203ENST00000467533 TSKSQ9UJT2 592 aa14.21□□□□□ -0.13
HDAC3-203ENST00000467533 ECE1P42892 770 aa14.2□□□□□ -0.14
HDAC3-203ENST00000467533 AMOTQ4VCS5 1084 aa14.2□□□□□ -0.14
HDAC3-203ENST00000467533 SOGA3Q5TF21 947 aa14.2□□□□□ -0.14
HDAC3-203ENST00000467533 CAPNS2Q96L46 248 aa14.2□□□□□ -0.14
HDAC3-203ENST00000467533 ZBTB1Q9Y2K1 713 aa14.2□□□□□ -0.14
HDAC3-203ENST00000467533 ZNF541Q9H0D2 1346 aa14.19□□□□□ -0.14
HDAC3-203ENST00000467533 TRPM7Q96QT4 1865 aa14.19□□□□□ -0.14
HDAC3-203ENST00000467533 CYP19A1P11511 503 aaPredicted RBP14.19□□□□□ -0.14
HDAC3-203ENST00000467533 PNMA8AQ86V59 439 aaPredicted RBP14.19□□□□□ -0.14
HDAC3-203ENST00000467533 CCDC24Q8N4L8 307 aa14.19□□□□□ -0.14
HDAC3-203ENST00000467533 BRIP1Q9BX63 1249 aa14.19□□□□□ -0.14
HDAC3-203ENST00000467533 POLKQ9UBT6 870 aa14.19□□□□□ -0.14
HDAC3-203ENST00000467533 RNF123Q5XPI4 1314 aa14.18□□□□□ -0.14
HDAC3-203ENST00000467533 CYP4F22Q6NT55 531 aa14.18□□□□□ -0.14
HDAC3-203ENST00000467533 PRPF40BQ6NWY9 871 aaKnown RBP14.18□□□□□ -0.14
HDAC3-203ENST00000467533 CNKSR1Q969H4 720 aa14.18□□□□□ -0.14
HDAC3-203ENST00000467533 GPR101Q96P66 508 aaPredicted RBP14.18□□□□□ -0.14
HDAC3-203ENST00000467533 CARD14Q9BXL6 1004 aa14.18□□□□□ -0.14
HDAC3-203ENST00000467533 PDE4DIPQ5VU43 2346 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms