RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 STARD3NLO95772 234 aa19.34■□□□□ 0.69
RB1-202ENST00000467505 USPL1Q5W0Q7 1092 aa19.34■□□□□ 0.69
RB1-202ENST00000467505 NARFQ9UHQ1 456 aa19.34■□□□□ 0.69
RB1-202ENST00000467505 TM4SF1P30408 202 aa19.33■□□□□ 0.68
RB1-202ENST00000467505 DDR1Q08345 913 aa19.33■□□□□ 0.68
RB1-202ENST00000467505 DALRD3Q5D0E6 543 aaKnown RBP19.33■□□□□ 0.68
RB1-202ENST00000467505 TEX13AQ9BXU3 409 aaPredicted RBP19.33■□□□□ 0.68
RB1-202ENST00000467505 NUDCQ9Y266 331 aa19.33■□□□□ 0.68
RB1-202ENST00000467505 POLRMTO00411 1230 aaKnown RBP19.32■□□□□ 0.68
RB1-202ENST00000467505 ZBTB1Q9Y2K1 713 aa19.32■□□□□ 0.68
RB1-202ENST00000467505 SIPA1L3O60292 1781 aaPredicted RBP19.32■□□□□ 0.68
RB1-202ENST00000467505 AFDNP55196 1824 aaKnown RBP19.31■□□□□ 0.68
RB1-202ENST00000467505 A0A087WZG4 1122 aa19.31■□□□□ 0.68
RB1-202ENST00000467505 KCNA3P22001 575 aa19.31■□□□□ 0.68
RB1-202ENST00000467505 NPM2Q86SE8 214 aaKnown RBP19.3■□□□□ 0.68
RB1-202ENST00000467505 CANXP27824 592 aaKnown RBP19.29■□□□□ 0.68
RB1-202ENST00000467505 ZNF790Q6PG37 636 aa19.29■□□□□ 0.68
RB1-202ENST00000467505 HEG1Q9ULI3 1381 aa19.29■□□□□ 0.68
RB1-202ENST00000467505 NRXN2Q9P2S2 1712 aa19.28■□□□□ 0.68
RB1-202ENST00000467505 NFIXQ14938 502 aa19.28■□□□□ 0.68
RB1-202ENST00000467505 IL17REQ8NFR9 667 aa19.28■□□□□ 0.68
RB1-202ENST00000467505 HSPA6P17066 643 aa19.27■□□□□ 0.68
RB1-202ENST00000467505 PRKAR2BP31323 418 aa19.27■□□□□ 0.68
RB1-202ENST00000467505 FMNL2Q96PY5 1086 aa19.27■□□□□ 0.68
RB1-202ENST00000467505 KIF3CO14782 793 aa19.26■□□□□ 0.67
RB1-202ENST00000467505 SERPINB2P05120 415 aa19.26■□□□□ 0.67
RB1-202ENST00000467505 CHRNA5P30532 468 aa19.26■□□□□ 0.67
RB1-202ENST00000467505 ZNF496Q96IT1 587 aaPredicted RBP19.26■□□□□ 0.67
RB1-202ENST00000467505 DLEC1Q9Y238 1755 aa19.26■□□□□ 0.67
RB1-202ENST00000467505 CEMIPQ8WUJ3 1361 aa19.25■□□□□ 0.67
RB1-202ENST00000467505 EIF5P55010 431 aaKnown RBP19.25■□□□□ 0.67
RB1-202ENST00000467505 C9orf131Q5VYM1 1079 aa19.25■□□□□ 0.67
RB1-202ENST00000467505 RTF1Q92541 710 aaKnown RBP19.25■□□□□ 0.67
RB1-202ENST00000467505 RSPH6AQ9H0K4 717 aa19.25■□□□□ 0.67
RB1-202ENST00000467505 SCN7AQ01118 1682 aa19.24■□□□□ 0.67
RB1-202ENST00000467505 BTBD11A6QL63 1104 aa19.24■□□□□ 0.67
RB1-202ENST00000467505 TOMM70O94826 608 aa19.24■□□□□ 0.67
RB1-202ENST00000467505 IL6STP40189 918 aaPredicted RBP19.24■□□□□ 0.67
RB1-202ENST00000467505 SBF1O95248 1867 aa19.23■□□□□ 0.67
RB1-202ENST00000467505 U2AF1L5P0DN76 240 aaPredicted RBP19.23■□□□□ 0.67
RB1-202ENST00000467505 PPP2R1AP30153 589 aa19.23■□□□□ 0.67
RB1-202ENST00000467505 U2AF1Q01081 240 aaKnown RBP eCLIP19.23■□□□□ 0.67
RB1-202ENST00000467505 BCL2L12Q9HB09 334 aa19.23■□□□□ 0.67
RB1-202ENST00000467505 PDZRN3Q9UPQ7 1066 aa19.23■□□□□ 0.67
RB1-202ENST00000467505 ZNF330Q9Y3S2 320 aaPredicted RBP19.23■□□□□ 0.67
RB1-202ENST00000467505 KDM2BQ8NHM5 1336 aa19.23■□□□□ 0.67
RB1-202ENST00000467505 NEFMP07197 916 aa19.22■□□□□ 0.67
RB1-202ENST00000467505 C16orf71Q8IYS4 520 aaPredicted RBP19.22■□□□□ 0.67
RB1-202ENST00000467505 PHACTR3Q96KR7 559 aa19.22■□□□□ 0.67
RB1-202ENST00000467505 RNF181Q9P0P0 153 aa19.22■□□□□ 0.67
RB1-202ENST00000467505 H0YIN7 160 aa19.21■□□□□ 0.67
RB1-202ENST00000467505 BICDL1Q6ZP65 573 aa19.21■□□□□ 0.67
RB1-202ENST00000467505 TTLL6Q8N841 843 aa19.2■□□□□ 0.66
RB1-202ENST00000467505 ZC3H4Q9UPT8 1303 aaKnown RBP19.2■□□□□ 0.66
RB1-202ENST00000467505 CARMIL3Q8ND23 1372 aa19.19■□□□□ 0.66
RB1-202ENST00000467505 HTATSF1O43719 755 aaKnown RBP19.19■□□□□ 0.66
RB1-202ENST00000467505 C2CD5Q86YS7 1000 aa19.19■□□□□ 0.66
RB1-202ENST00000467505 TBC1D2BQ9UPU7 963 aa19.19■□□□□ 0.66
RB1-202ENST00000467505 TNRC6CQ9HCJ0 1690 aaKnown RBP19.19■□□□□ 0.66
RB1-202ENST00000467505 NPHP1O15259 732 aa19.18■□□□□ 0.66
RB1-202ENST00000467505 PDE6BP35913 854 aa19.18■□□□□ 0.66
RB1-202ENST00000467505 APLP1P51693 650 aa19.18■□□□□ 0.66
RB1-202ENST00000467505 NMRK2Q9NPI5 230 aa19.18■□□□□ 0.66
RB1-202ENST00000467505 BCORQ6W2J9 1755 aa19.17■□□□□ 0.66
RB1-202ENST00000467505 TBC1D9BQ66K14 1250 aa19.17■□□□□ 0.66
RB1-202ENST00000467505 SETDB2Q96T68 719 aa19.17■□□□□ 0.66
RB1-202ENST00000467505 A1BGP04217 495 aa19.16■□□□□ 0.66
RB1-202ENST00000467505 SNRPA1P09661 255 aaKnown RBP19.16■□□□□ 0.66
RB1-202ENST00000467505 LMNB1P20700 586 aa19.16■□□□□ 0.66
RB1-202ENST00000467505 RBM46Q8TBY0 533 aaKnown RBP19.16■□□□□ 0.66
RB1-202ENST00000467505 BRIP1Q9BX63 1249 aa19.16■□□□□ 0.66
RB1-202ENST00000467505 ANKRD31Q8N7Z5 1873 aa19.16■□□□□ 0.66
RB1-202ENST00000467505 DZIP3Q86Y13 1208 aaKnown RBP19.15■□□□□ 0.66
RB1-202ENST00000467505 ZNF652Q9Y2D9 606 aa19.15■□□□□ 0.66
RB1-202ENST00000467505 CCDC88AQ3V6T2 1871 aa19.15■□□□□ 0.66
RB1-202ENST00000467505 CEP350Q5VT06 3117 aa19.14■□□□□ 0.66
RB1-202ENST00000467505 KCNQ3O43525 872 aa19.14■□□□□ 0.65
RB1-202ENST00000467505 ST5P78524 1137 aa19.14■□□□□ 0.65
RB1-202ENST00000467505 MCM10Q7L590 875 aa19.14■□□□□ 0.65
RB1-202ENST00000467505 CNBD1Q8NA66 436 aa19.14■□□□□ 0.65
RB1-202ENST00000467505 RASSF7Q02833 373 aa19.13■□□□□ 0.65
RB1-202ENST00000467505 PRR5LQ6MZQ0 368 aa19.13■□□□□ 0.65
RB1-202ENST00000467505 CLEC4GQ6UXB4 293 aa19.13■□□□□ 0.65
RB1-202ENST00000467505 ZNF622Q969S3 477 aaKnown RBP eCLIP19.13■□□□□ 0.65
RB1-202ENST00000467505 TIAM2Q8IVF5 1701 aa19.12■□□□□ 0.65
RB1-202ENST00000467505 CAMTA2O94983 1202 aa19.12■□□□□ 0.65
RB1-202ENST00000467505 FSTL1Q12841 308 aa19.12■□□□□ 0.65
RB1-202ENST00000467505 PNNQ9H307 717 aaKnown RBP19.12■□□□□ 0.65
RB1-202ENST00000467505 USP16Q9Y5T5 823 aa19.12■□□□□ 0.65
RB1-202ENST00000467505 DLG5Q8TDM6 1919 aa19.12■□□□□ 0.65
RB1-202ENST00000467505 RGL2O15211 777 aa19.11■□□□□ 0.65
RB1-202ENST00000467505 TAF7Q15545 349 aaPredicted RBP19.11■□□□□ 0.65
RB1-202ENST00000467505 PNISRQ8TF01 805 aaKnown RBP19.11■□□□□ 0.65
RB1-202ENST00000467505 LAMB4A4D0S4 1761 aa19.11■□□□□ 0.65
RB1-202ENST00000467505 COL11A2P13942 1736 aaPredicted RBP19.11■□□□□ 0.65
RB1-202ENST00000467505 CNKSR1Q969H4 720 aa19.1■□□□□ 0.65
RB1-202ENST00000467505 RRAGCQ9HB90 399 aa19.1■□□□□ 0.65
RB1-202ENST00000467505 CACNA1SQ13698 1873 aa19.09■□□□□ 0.65
RB1-202ENST00000467505 DCTN1Q14203 1278 aa19.09■□□□□ 0.65
RB1-202ENST00000467505 SOGA3Q5TF21 947 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms