RNA–Protein interactions for RNA: ENST00000467411.5

CDCA7-206, Transcript of cell division cycle associated 7, humanhuman

TSL 1 (best)

Gene CDCA7, Length 3,176 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-206ENST00000467411 GNAI3P08754 354 aa12.82□□□□□ -0.36
CDCA7-206ENST00000467411 SNRPA1P09661 255 aaKnown RBP12.82□□□□□ -0.36
CDCA7-206ENST00000467411 BCL9O00512 1426 aa12.82□□□□□ -0.36
CDCA7-206ENST00000467411 F6X3S4 739 aa12.82□□□□□ -0.36
CDCA7-206ENST00000467411 EVA1CP58658 441 aa12.82□□□□□ -0.36
CDCA7-206ENST00000467411 FKBP5Q13451 457 aaPredicted RBP12.82□□□□□ -0.36
CDCA7-206ENST00000467411 CHD1LQ86WJ1 897 aa12.82□□□□□ -0.36
CDCA7-206ENST00000467411 FMNL2Q96PY5 1086 aa12.82□□□□□ -0.36
CDCA7-206ENST00000467411 USP44Q9H0E7 712 aa12.82□□□□□ -0.36
CDCA7-206ENST00000467411 ALDH1L1O75891 902 aa12.81□□□□□ -0.36
CDCA7-206ENST00000467411 CABP4P57796 275 aa12.81□□□□□ -0.36
CDCA7-206ENST00000467411 BARGINQ6ZT62 677 aa12.81□□□□□ -0.36
CDCA7-206ENST00000467411 ZNF496Q96IT1 587 aaPredicted RBP12.81□□□□□ -0.36
CDCA7-206ENST00000467411 PRAMEF22A3QJZ6 481 aa12.81□□□□□ -0.36
CDCA7-206ENST00000467411 KSR2Q6VAB6 950 aa12.81□□□□□ -0.36
CDCA7-206ENST00000467411 SPATA31A5Q5VU36 1347 aa12.81□□□□□ -0.36
CDCA7-206ENST00000467411 SPATA31A7Q8IWB4 1347 aa12.81□□□□□ -0.36
CDCA7-206ENST00000467411 JCADQ9P266 1359 aa12.81□□□□□ -0.36
CDCA7-206ENST00000467411 DNAAF4Q8WXU2 420 aa12.81□□□□□ -0.36
CDCA7-206ENST00000467411 GNAI2P04899 355 aa12.8□□□□□ -0.36
CDCA7-206ENST00000467411 VSIG10Q8N0Z9 540 aa12.8□□□□□ -0.36
CDCA7-206ENST00000467411 C1orf115Q9H7X2 142 aa12.8□□□□□ -0.36
CDCA7-206ENST00000467411 COL5A3P25940 1745 aaPredicted RBP12.8□□□□□ -0.36
CDCA7-206ENST00000467411 ANKRD36CQ5JPF3 1778 aa12.8□□□□□ -0.36
CDCA7-206ENST00000467411 BCL9LQ86UU0 1499 aa12.8□□□□□ -0.36
CDCA7-206ENST00000467411 ATP8B2P98198 1209 aa12.8□□□□□ -0.36
CDCA7-206ENST00000467411 PROSER3Q2NL68 480 aa12.8□□□□□ -0.36
CDCA7-206ENST00000467411 MTX1Q13505 466 aa12.79□□□□□ -0.36
CDCA7-206ENST00000467411 POLA2Q14181 598 aa12.79□□□□□ -0.36
CDCA7-206ENST00000467411 SLC39A6Q13433 755 aa12.79□□□□□ -0.36
CDCA7-206ENST00000467411 STRN4Q9NRL3 753 aa12.79□□□□□ -0.36
CDCA7-206ENST00000467411 SRCIN1Q9C0H9 1055 aa12.78□□□□□ -0.36
CDCA7-206ENST00000467411 SPATA31A6Q5VVP1 1343 aa12.78□□□□□ -0.36
CDCA7-206ENST00000467411 EIF2S2P20042 333 aaKnown RBP12.78□□□□□ -0.36
CDCA7-206ENST00000467411 PI4KAP2A4QPH2 592 aa12.77□□□□□ -0.36
CDCA7-206ENST00000467411 TTC5Q8N0Z6 440 aa12.77□□□□□ -0.36
CDCA7-206ENST00000467411 PI4KAP1Q8N8J0 262 aa12.77□□□□□ -0.36
CDCA7-206ENST00000467411 SALL3Q9BXA9 1300 aa12.77□□□□□ -0.36
CDCA7-206ENST00000467411 SSH3Q8TE77 659 aa12.77□□□□□ -0.37
CDCA7-206ENST00000467411 NECTIN2Q92692 538 aa12.77□□□□□ -0.37
CDCA7-206ENST00000467411 RGS3P49796 1198 aa12.77□□□□□ -0.37
CDCA7-206ENST00000467411 BMP2KLQ5H9B9 411 aa12.76□□□□□ -0.37
CDCA7-206ENST00000467411 NHSQ6T4R5 1651 aa12.76□□□□□ -0.37
CDCA7-206ENST00000467411 HMMRO75330 724 aa12.76□□□□□ -0.37
CDCA7-206ENST00000467411 FNBP4Q8N3X1 1017 aaPredicted RBP12.76□□□□□ -0.37
CDCA7-206ENST00000467411 LINS1Q8NG48 757 aa12.76□□□□□ -0.37
CDCA7-206ENST00000467411 OSBPL3Q9H4L5 887 aa12.76□□□□□ -0.37
CDCA7-206ENST00000467411 USP16Q9Y5T5 823 aa12.76□□□□□ -0.37
CDCA7-206ENST00000467411 DDX58O95786 925 aaKnown RBP12.75□□□□□ -0.37
CDCA7-206ENST00000467411 SLC4A10Q6U841 1118 aa12.75□□□□□ -0.37
CDCA7-206ENST00000467411 MAP3K2Q9Y2U5 619 aa12.75□□□□□ -0.37
CDCA7-206ENST00000467411 METTL22Q9BUU2 404 aaPredicted RBP12.75□□□□□ -0.37
CDCA7-206ENST00000467411 BCORQ6W2J9 1755 aa12.74□□□□□ -0.37
CDCA7-206ENST00000467411 VPS72Q15906 364 aa12.74□□□□□ -0.37
CDCA7-206ENST00000467411 PIGBQ92521 554 aa12.74□□□□□ -0.37
CDCA7-206ENST00000467411 NBPF26B4DH59 902 aa12.73□□□□□ -0.37
CDCA7-206ENST00000467411 IGKV5-2P06315 115 aa12.73□□□□□ -0.37
CDCA7-206ENST00000467411 NBPF14Q5TI25 921 aa12.73□□□□□ -0.37
CDCA7-206ENST00000467411 NBPF10Q6P3W6 841 aaKnown RBP12.73□□□□□ -0.37
CDCA7-206ENST00000467411 NBPF15Q8N660 670 aa12.73□□□□□ -0.37
CDCA7-206ENST00000467411 TEX13AQ9BXU3 409 aaPredicted RBP12.73□□□□□ -0.37
CDCA7-206ENST00000467411 ATG3Q9NT62 314 aa12.73□□□□□ -0.37
CDCA7-206ENST00000467411 NOP58Q9Y2X3 529 aaKnown RBP12.73□□□□□ -0.37
CDCA7-206ENST00000467411 UBTFL1P0CB47 393 aaPredicted RBP12.73□□□□□ -0.37
CDCA7-206ENST00000467411 UNC5CLQ8IV45 518 aa12.73□□□□□ -0.37
CDCA7-206ENST00000467411 PLEKHM2Q8IWE5 1019 aa12.73□□□□□ -0.37
CDCA7-206ENST00000467411 CERKQ8TCT0 537 aa12.73□□□□□ -0.37
CDCA7-206ENST00000467411 HDAC5Q9UQL6 1122 aa12.73□□□□□ -0.37
CDCA7-206ENST00000467411 ANKRD45Q5TZF3 282 aa12.73□□□□□ -0.37
CDCA7-206ENST00000467411 LRRFIP2Q9Y608 721 aaKnown RBP12.73□□□□□ -0.37
CDCA7-206ENST00000467411 SBF2Q86WG5 1849 aa12.73□□□□□ -0.37
CDCA7-206ENST00000467411 PNMA6EA0A0J9YXQ4 647 aa12.72□□□□□ -0.37
CDCA7-206ENST00000467411 EXOC5O00471 708 aa12.72□□□□□ -0.37
CDCA7-206ENST00000467411 PLBD2Q8NHP8 589 aa12.72□□□□□ -0.37
CDCA7-206ENST00000467411 TMOD3Q9NYL9 352 aa12.72□□□□□ -0.37
CDCA7-206ENST00000467411 UBAP1LF5GYI3 381 aa12.72□□□□□ -0.37
CDCA7-206ENST00000467411 ANXA1P04083 346 aa12.72□□□□□ -0.37
CDCA7-206ENST00000467411 NBPF7P0C2Y1 421 aaPredicted RBP12.72□□□□□ -0.37
CDCA7-206ENST00000467411 LY75O60449 1722 aa12.72□□□□□ -0.37
CDCA7-206ENST00000467411 NEURL1BA8MQ27 555 aa12.71□□□□□ -0.37
CDCA7-206ENST00000467411 RAB11FIP3O75154 756 aa12.71□□□□□ -0.37
CDCA7-206ENST00000467411 DDX54Q8TDD1 881 aaKnown RBP12.71□□□□□ -0.37
CDCA7-206ENST00000467411 XAGE3Q8WTP9 111 aa12.71□□□□□ -0.37
CDCA7-206ENST00000467411 AOX1Q06278 1338 aa12.71□□□□□ -0.37
CDCA7-206ENST00000467411 CASP7P55210 303 aa12.71□□□□□ -0.37
CDCA7-206ENST00000467411 KAZALD1Q96I82 304 aa12.71□□□□□ -0.37
CDCA7-206ENST00000467411 LNPKQ9C0E8 428 aa12.71□□□□□ -0.37
CDCA7-206ENST00000467411 LAMB2P55268 1798 aa12.71□□□□□ -0.37
CDCA7-206ENST00000467411 NUP98P52948 1817 aa12.7□□□□□ -0.38
CDCA7-206ENST00000467411 ANKRD13DQ6ZTN6 518 aa12.7□□□□□ -0.38
CDCA7-206ENST00000467411 COPS6Q7L5N1 327 aa12.7□□□□□ -0.38
CDCA7-206ENST00000467411 IPO9Q96P70 1041 aaKnown RBP12.7□□□□□ -0.38
CDCA7-206ENST00000467411 STAP2Q9UGK3 403 aa12.7□□□□□ -0.38
CDCA7-206ENST00000467411 USP42Q9H9J4 1324 aaKnown RBP12.7□□□□□ -0.38
CDCA7-206ENST00000467411 MSH5O43196 834 aa12.7□□□□□ -0.38
CDCA7-206ENST00000467411 ATRNO75882 1429 aa12.7□□□□□ -0.38
CDCA7-206ENST00000467411 GRM8O00222 908 aa12.69□□□□□ -0.38
CDCA7-206ENST00000467411 GCKRQ14397 625 aa12.69□□□□□ -0.38
CDCA7-206ENST00000467411 SEC24BO95487 1268 aa12.69□□□□□ -0.38
CDCA7-206ENST00000467411 PIP4K2BP78356 416 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms