RNA–Protein interactions for RNA: ENST00000467331.5

APTX-214, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-214ENST00000467331 MTERF4Q7Z6M4 381 aaKnown RBP11.77□□□□□ -0.53
APTX-214ENST00000467331 NSFL1CQ9UNZ2 370 aaKnown RBP11.77□□□□□ -0.53
APTX-214ENST00000467331 RAD50Q92878 1312 aa11.76□□□□□ -0.53
APTX-214ENST00000467331 USP42Q9H9J4 1324 aaKnown RBP11.76□□□□□ -0.53
APTX-214ENST00000467331 PNMA6EA0A0J9YXQ4 647 aa11.76□□□□□ -0.53
APTX-214ENST00000467331 RNF39Q9H2S5 420 aa11.76□□□□□ -0.53
APTX-214ENST00000467331 ANO2Q9NQ90 1003 aa11.76□□□□□ -0.53
APTX-214ENST00000467331 ANKARQ7Z5J8 1434 aa11.76□□□□□ -0.53
APTX-214ENST00000467331 MAP3K5Q99683 1374 aa11.76□□□□□ -0.53
APTX-214ENST00000467331 LETM1O95202 739 aaPredicted RBP11.75□□□□□ -0.53
APTX-214ENST00000467331 SLIT1O75093 1534 aa11.75□□□□□ -0.53
APTX-214ENST00000467331 DYNC1I1O14576 645 aa11.75□□□□□ -0.53
APTX-214ENST00000467331 FOXO3O43524 673 aa11.75□□□□□ -0.53
APTX-214ENST00000467331 EYA1Q99502 592 aa11.75□□□□□ -0.53
APTX-214ENST00000467331 CHD2O14647 1828 aaKnown RBP11.75□□□□□ -0.53
APTX-214ENST00000467331 ARHGAP23Q9P227 1491 aa11.74□□□□□ -0.53
APTX-214ENST00000467331 GNAT3A8MTJ3 354 aa11.74□□□□□ -0.53
APTX-214ENST00000467331 FKBP5Q13451 457 aaPredicted RBP11.74□□□□□ -0.53
APTX-214ENST00000467331 TTC14Q96N46 770 aa11.74□□□□□ -0.53
APTX-214ENST00000467331 CHMP4AQ9BY43 222 aa11.74□□□□□ -0.53
APTX-214ENST00000467331 KDM3BQ7LBC6 1761 aa11.74□□□□□ -0.53
APTX-214ENST00000467331 SGSM2O43147 1006 aa11.74□□□□□ -0.53
APTX-214ENST00000467331 HOXB7P09629 217 aa11.74□□□□□ -0.53
APTX-214ENST00000467331 SASS6Q6UVJ0 657 aa11.74□□□□□ -0.53
APTX-214ENST00000467331 USP44Q9H0E7 712 aa11.74□□□□□ -0.53
APTX-214ENST00000467331 MIS18AQ9NYP9 233 aa11.74□□□□□ -0.53
APTX-214ENST00000467331 LRRFIP2Q9Y608 721 aaKnown RBP11.74□□□□□ -0.53
APTX-214ENST00000467331 TRIM6-TRIM34B2RNG4 842 aa11.73□□□□□ -0.53
APTX-214ENST00000467331 UBTFL1P0CB47 393 aaPredicted RBP11.73□□□□□ -0.53
APTX-214ENST00000467331 CCDC183Q5T5S1 534 aa11.73□□□□□ -0.53
APTX-214ENST00000467331 PI4K2BQ8TCG2 481 aa11.72□□□□□ -0.53
APTX-214ENST00000467331 RILPL2Q969X0 211 aa11.72□□□□□ -0.53
APTX-214ENST00000467331 R3HCC1Q9Y3T6 440 aaKnown RBP11.72□□□□□ -0.53
APTX-214ENST00000467331 PDIA4P13667 645 aaKnown RBP11.72□□□□□ -0.53
APTX-214ENST00000467331 XPCQ01831 940 aaPredicted RBP11.72□□□□□ -0.53
APTX-214ENST00000467331 TAF7Q15545 349 aaPredicted RBP11.72□□□□□ -0.53
APTX-214ENST00000467331 HSP90AB4PQ58FF6 505 aa11.72□□□□□ -0.53
APTX-214ENST00000467331 TSHZ3Q63HK5 1081 aa11.72□□□□□ -0.53
APTX-214ENST00000467331 UNC5CLQ8IV45 518 aa11.72□□□□□ -0.53
APTX-214ENST00000467331 KIF1BPQ96EK5 621 aa11.72□□□□□ -0.53
APTX-214ENST00000467331 ESF1Q9H501 851 aaKnown RBP11.72□□□□□ -0.53
APTX-214ENST00000467331 CEMIPQ8WUJ3 1361 aa11.72□□□□□ -0.53
APTX-214ENST00000467331 RGPD8O14715 1765 aaPredicted RBP11.71□□□□□ -0.53
APTX-214ENST00000467331 ZSCAN22P10073 491 aaPredicted RBP11.71□□□□□ -0.53
APTX-214ENST00000467331 KIAA2012Q0VF49 1180 aa11.71□□□□□ -0.53
APTX-214ENST00000467331 USP48Q86UV5 1035 aa11.71□□□□□ -0.53
APTX-214ENST00000467331 KCNB2Q92953 911 aa11.71□□□□□ -0.53
APTX-214ENST00000467331 CHAMP1Q96JM3 812 aa11.71□□□□□ -0.53
APTX-214ENST00000467331 LSG1Q9H089 658 aaKnown RBP11.71□□□□□ -0.53
APTX-214ENST00000467331 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.71□□□□□ -0.53
APTX-214ENST00000467331 ATP6V1DQ9Y5K8 247 aa11.71□□□□□ -0.53
APTX-214ENST00000467331 TTC41PQ6P2S7 1318 aa11.71□□□□□ -0.54
APTX-214ENST00000467331 PHRF1Q9P1Y6 1649 aaKnown RBP11.71□□□□□ -0.54
APTX-214ENST00000467331 AMPHP49418 695 aa11.71□□□□□ -0.54
APTX-214ENST00000467331 UBE2HP62256 183 aa11.71□□□□□ -0.54
APTX-214ENST00000467331 CNTROBQ8N137 903 aa11.71□□□□□ -0.54
APTX-214ENST00000467331 RHPN1Q8TCX5 695 aa11.71□□□□□ -0.54
APTX-214ENST00000467331 LMO7Q8WWI1 1683 aa11.71□□□□□ -0.54
APTX-214ENST00000467331 TCHHQ07283 1943 aa11.7□□□□□ -0.54
APTX-214ENST00000467331 UQCRHLA0A096LP55 91 aa11.7□□□□□ -0.54
APTX-214ENST00000467331 UQCRHP07919 91 aa11.7□□□□□ -0.54
APTX-214ENST00000467331 TM6SF1Q9BZW5 370 aa11.7□□□□□ -0.54
APTX-214ENST00000467331 LIMCH1Q9UPQ0 1083 aa11.7□□□□□ -0.54
APTX-214ENST00000467331 SNX14Q9Y5W7 946 aa11.7□□□□□ -0.54
APTX-214ENST00000467331 MTX1Q13505 466 aa11.69□□□□□ -0.54
APTX-214ENST00000467331 IL17REQ8NFR9 667 aa11.69□□□□□ -0.54
APTX-214ENST00000467331 UPF3BQ9BZI7 483 aaKnown RBP11.69□□□□□ -0.54
APTX-214ENST00000467331 TBX22Q9Y458 520 aa11.69□□□□□ -0.54
APTX-214ENST00000467331 ADGRL3Q9HAR2 1447 aa11.69□□□□□ -0.54
APTX-214ENST00000467331 HOXC9P31274 260 aa11.69□□□□□ -0.54
APTX-214ENST00000467331 PIBF1Q8WXW3 757 aa11.69□□□□□ -0.54
APTX-214ENST00000467331 PRIMPOLQ96LW4 560 aa11.69□□□□□ -0.54
APTX-214ENST00000467331 ZSCAN31Q96LW9 406 aaPredicted RBP11.69□□□□□ -0.54
APTX-214ENST00000467331 IL25Q9H293 177 aa11.69□□□□□ -0.54
APTX-214ENST00000467331 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.69□□□□□ -0.54
APTX-214ENST00000467331 GADD45BO75293 160 aaPredicted RBP11.68□□□□□ -0.54
APTX-214ENST00000467331 MLECQ14165 292 aa11.68□□□□□ -0.54
APTX-214ENST00000467331 FOXD4L5Q5VV16 416 aaPredicted RBP11.68□□□□□ -0.54
APTX-214ENST00000467331 PPP1R42Q7Z4L9 355 aa11.68□□□□□ -0.54
APTX-214ENST00000467331 VSIG10Q8N0Z9 540 aa11.68□□□□□ -0.54
APTX-214ENST00000467331 RNF214Q8ND24 703 aa11.68□□□□□ -0.54
APTX-214ENST00000467331 FOXD4L4Q8WXT5 416 aaPredicted RBP11.68□□□□□ -0.54
APTX-214ENST00000467331 SH2B1Q9NRF2 756 aaPredicted RBP11.68□□□□□ -0.54
APTX-214ENST00000467331 OVOS2A0A0G2JMS6 1433 aa11.68□□□□□ -0.54
APTX-214ENST00000467331 KIF13AQ9H1H9 1805 aa11.68□□□□□ -0.54
APTX-214ENST00000467331 STX6O43752 255 aa11.68□□□□□ -0.54
APTX-214ENST00000467331 F13A1P00488 732 aa11.68□□□□□ -0.54
APTX-214ENST00000467331 HDGFL1Q5TGJ6 251 aa11.68□□□□□ -0.54
APTX-214ENST00000467331 RUFY2Q8WXA3 655 aa11.68□□□□□ -0.54
APTX-214ENST00000467331 FUCA2Q9BTY2 467 aa11.68□□□□□ -0.54
APTX-214ENST00000467331 SURF6O75683 361 aaKnown RBP11.67□□□□□ -0.54
APTX-214ENST00000467331 GLRX3O76003 335 aaKnown RBP11.67□□□□□ -0.54
APTX-214ENST00000467331 PTMAP06454 111 aaKnown RBP11.67□□□□□ -0.54
APTX-214ENST00000467331 LTKP29376 864 aa11.67□□□□□ -0.54
APTX-214ENST00000467331 GTF2F1P35269 517 aaKnown RBP eCLIP11.67□□□□□ -0.54
APTX-214ENST00000467331 AK2P54819 239 aa11.67□□□□□ -0.54
APTX-214ENST00000467331 HMGN5P82970 282 aaKnown RBP11.67□□□□□ -0.54
APTX-214ENST00000467331 VPS53Q5VIR6 699 aa11.67□□□□□ -0.54
APTX-214ENST00000467331 RUFY3Q7L099 469 aa11.67□□□□□ -0.54
APTX-214ENST00000467331 SPTLC3Q9NUV7 552 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms