RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 USP42Q9H9J4 1324 aaKnown RBP25.8■■□□□ 1.72
GMDS-203ENST00000467288 DCTN1Q14203 1278 aa25.79■■□□□ 1.72
GMDS-203ENST00000467288 ZBTB1Q9Y2K1 713 aa25.79■■□□□ 1.72
GMDS-203ENST00000467288 KCNQ3O43525 872 aa25.78■■□□□ 1.72
GMDS-203ENST00000467288 FMNL2Q96PY5 1086 aa25.78■■□□□ 1.72
GMDS-203ENST00000467288 TEX13AQ9BXU3 409 aaPredicted RBP25.78■■□□□ 1.72
GMDS-203ENST00000467288 SRP68Q9UHB9 627 aaKnown RBP25.78■■□□□ 1.72
GMDS-203ENST00000467288 STARD3NLO95772 234 aa25.77■■□□□ 1.72
GMDS-203ENST00000467288 NFE2L2Q16236 605 aa25.76■■□□□ 1.71
GMDS-203ENST00000467288 WWC3Q9ULE0 1092 aa25.76■■□□□ 1.71
GMDS-203ENST00000467288 PRKRIP1Q9H875 184 aaPredicted RBP25.75■■□□□ 1.71
GMDS-203ENST00000467288 FKBP8Q14318 412 aa25.74■■□□□ 1.71
GMDS-203ENST00000467288 DLG5Q8TDM6 1919 aa25.74■■□□□ 1.71
GMDS-203ENST00000467288 COL15A1P39059 1388 aa25.73■■□□□ 1.71
GMDS-203ENST00000467288 MAPK8IP3Q9UPT6 1336 aa25.73■■□□□ 1.71
GMDS-203ENST00000467288 TAF7Q15545 349 aaPredicted RBP25.73■■□□□ 1.71
GMDS-203ENST00000467288 CANXP27824 592 aaKnown RBP25.72■■□□□ 1.71
GMDS-203ENST00000467288 NARFQ9UHQ1 456 aa25.72■■□□□ 1.71
GMDS-203ENST00000467288 ZPR1O75312 459 aa25.71■■□□□ 1.71
GMDS-203ENST00000467288 EIF5P55010 431 aaKnown RBP25.71■■□□□ 1.71
GMDS-203ENST00000467288 USPL1Q5W0Q7 1092 aa25.71■■□□□ 1.71
GMDS-203ENST00000467288 PARP3Q9Y6F1 533 aa25.71■■□□□ 1.71
GMDS-203ENST00000467288 ATP10DQ9P241 1426 aa25.71■■□□□ 1.71
GMDS-203ENST00000467288 C10orf71Q711Q0 1435 aa25.7■■□□□ 1.7
GMDS-203ENST00000467288 KIF13BQ9NQT8 1826 aa25.7■■□□□ 1.7
GMDS-203ENST00000467288 TM4SF1P30408 202 aa25.69■■□□□ 1.7
GMDS-203ENST00000467288 DDR1Q08345 913 aa25.68■■□□□ 1.7
GMDS-203ENST00000467288 GPBP1L1Q9HC44 474 aaPredicted RBP25.68■■□□□ 1.7
GMDS-203ENST00000467288 USP16Q9Y5T5 823 aa25.68■■□□□ 1.7
GMDS-203ENST00000467288 A1BGP04217 495 aa25.67■■□□□ 1.7
GMDS-203ENST00000467288 SNRPA1P09661 255 aaKnown RBP25.67■■□□□ 1.7
GMDS-203ENST00000467288 IL6STP40189 918 aaPredicted RBP25.67■■□□□ 1.7
GMDS-203ENST00000467288 PNISRQ8TF01 805 aaKnown RBP25.67■■□□□ 1.7
GMDS-203ENST00000467288 BCL2L12Q9HB09 334 aa25.67■■□□□ 1.7
GMDS-203ENST00000467288 A0A087WZG4 1122 aa25.66■■□□□ 1.7
GMDS-203ENST00000467288 TGFB2P61812 414 aa25.66■■□□□ 1.7
GMDS-203ENST00000467288 THUMPD2Q9BTF0 503 aaKnown RBP25.66■■□□□ 1.7
GMDS-203ENST00000467288 PXDNLA1KZ92 1463 aa25.66■■□□□ 1.7
GMDS-203ENST00000467288 PRAMEF22A3QJZ6 481 aa25.65■■□□□ 1.7
GMDS-203ENST00000467288 POLRMTO00411 1230 aaKnown RBP25.65■■□□□ 1.7
GMDS-203ENST00000467288 ZNF526Q8TF50 670 aaPredicted RBP25.65■■□□□ 1.7
GMDS-203ENST00000467288 MIS18AQ9NYP9 233 aa25.65■■□□□ 1.7
GMDS-203ENST00000467288 KIAA1551Q9HCM1 1747 aa25.65■■□□□ 1.7
GMDS-203ENST00000467288 TMPOP42166 694 aaKnown RBP25.64■■□□□ 1.7
GMDS-203ENST00000467288 RIPK4P57078 832 aa25.63■■□□□ 1.69
GMDS-203ENST00000467288 NFIXQ14938 502 aa25.63■■□□□ 1.69
GMDS-203ENST00000467288 WDR43Q15061 677 aaKnown RBP eCLIP25.63■■□□□ 1.69
GMDS-203ENST00000467288 KDM3BQ7LBC6 1761 aa25.63■■□□□ 1.69
GMDS-203ENST00000467288 ADCY9O60503 1353 aa25.62■■□□□ 1.69
GMDS-203ENST00000467288 ZNF316A6NFI3 1004 aaPredicted RBP25.62■■□□□ 1.69
GMDS-203ENST00000467288 CEP350Q5VT06 3117 aa25.61■■□□□ 1.69
GMDS-203ENST00000467288 A0A0G2JLW4 131 aa25.61■■□□□ 1.69
GMDS-203ENST00000467288 RUNDC1Q96C34 613 aa25.61■■□□□ 1.69
GMDS-203ENST00000467288 ADAMTS8Q9UP79 889 aa25.61■■□□□ 1.69
GMDS-203ENST00000467288 CCDC146Q8IYE0 955 aa25.6■■□□□ 1.69
GMDS-203ENST00000467288 TBC1D2BQ9UPU7 963 aa25.6■■□□□ 1.69
GMDS-203ENST00000467288 ZNF330Q9Y3S2 320 aaPredicted RBP25.6■■□□□ 1.69
GMDS-203ENST00000467288 LMOD3Q0VAK6 560 aa25.59■■□□□ 1.69
GMDS-203ENST00000467288 N4BP2Q86UW6 1770 aaPredicted RBP25.59■■□□□ 1.69
GMDS-203ENST00000467288 DPEP1P16444 411 aa25.58■■□□□ 1.69
GMDS-203ENST00000467288 EIF4A1P60842 406 aaKnown RBP25.58■■□□□ 1.69
GMDS-203ENST00000467288 SCN7AQ01118 1682 aa25.58■■□□□ 1.68
GMDS-203ENST00000467288 PIP4K2AP48426 406 aaPredicted RBP25.57■■□□□ 1.68
GMDS-203ENST00000467288 NPM2Q86SE8 214 aaKnown RBP25.57■■□□□ 1.68
GMDS-203ENST00000467288 BCS1LQ9Y276 419 aa25.57■■□□□ 1.68
GMDS-203ENST00000467288 NRXN2Q9P2S2 1712 aa25.57■■□□□ 1.68
GMDS-203ENST00000467288 NBPF26B4DH59 902 aa25.56■■□□□ 1.68
GMDS-203ENST00000467288 CAMTA2O94983 1202 aa25.56■■□□□ 1.68
GMDS-203ENST00000467288 SERPINB2P05120 415 aa25.56■■□□□ 1.68
GMDS-203ENST00000467288 NBPF10Q6P3W6 841 aaKnown RBP25.56■■□□□ 1.68
GMDS-203ENST00000467288 NBPF15Q8N660 670 aa25.56■■□□□ 1.68
GMDS-203ENST00000467288 RRP7AQ9Y3A4 280 aaKnown RBP25.56■■□□□ 1.68
GMDS-203ENST00000467288 LAMB4A4D0S4 1761 aa25.55■■□□□ 1.68
GMDS-203ENST00000467288 KCNA3P22001 575 aa25.55■■□□□ 1.68
GMDS-203ENST00000467288 DZIP3Q86Y13 1208 aaKnown RBP25.55■■□□□ 1.68
GMDS-203ENST00000467288 BABAM1Q9NWV8 329 aa25.55■■□□□ 1.68
GMDS-203ENST00000467288 AFDNP55196 1824 aaKnown RBP25.55■■□□□ 1.68
GMDS-203ENST00000467288 TBC1D9BQ66K14 1250 aa25.54■■□□□ 1.68
GMDS-203ENST00000467288 BICDL1Q6ZP65 573 aa25.53■■□□□ 1.68
GMDS-203ENST00000467288 TSPYL4Q9UJ04 414 aa25.53■■□□□ 1.68
GMDS-203ENST00000467288 TRIM35Q9UPQ4 493 aa25.53■■□□□ 1.68
GMDS-203ENST00000467288 BRCA1P38398 1863 aaKnown RBP25.52■■□□□ 1.68
GMDS-203ENST00000467288 NEUROD2Q15784 382 aa25.52■■□□□ 1.68
GMDS-203ENST00000467288 ARHGAP27Q6ZUM4 889 aa25.52■■□□□ 1.68
GMDS-203ENST00000467288 BCORQ6W2J9 1755 aa25.51■■□□□ 1.67
GMDS-203ENST00000467288 KIF3CO14782 793 aa25.49■■□□□ 1.67
GMDS-203ENST00000467288 RGL2O15211 777 aa25.49■■□□□ 1.67
GMDS-203ENST00000467288 HSPA6P17066 643 aa25.49■■□□□ 1.67
GMDS-203ENST00000467288 CHRNA5P30532 468 aa25.49■■□□□ 1.67
GMDS-203ENST00000467288 PIM2Q9P1W9 311 aa25.49■■□□□ 1.67
GMDS-203ENST00000467288 CARMIL3Q8ND23 1372 aa25.48■■□□□ 1.67
GMDS-203ENST00000467288 CCDC184Q52MB2 194 aa25.48■■□□□ 1.67
GMDS-203ENST00000467288 CLEC4GQ6UXB4 293 aa25.48■■□□□ 1.67
GMDS-203ENST00000467288 CHL1O00533 1208 aa25.46■■□□□ 1.67
GMDS-203ENST00000467288 SETDB2Q96T68 719 aa25.46■■□□□ 1.67
GMDS-203ENST00000467288 PRR5LQ6MZQ0 368 aa25.45■■□□□ 1.66
GMDS-203ENST00000467288 ZNF652Q9Y2D9 606 aa25.45■■□□□ 1.66
GMDS-203ENST00000467288 ERBB4Q15303 1308 aa25.44■■□□□ 1.66
GMDS-203ENST00000467288 DALRD3Q5D0E6 543 aaKnown RBP25.44■■□□□ 1.66
GMDS-203ENST00000467288 ARFGEF1Q9Y6D6 1849 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms