RNA–Protein interactions for RNA: ENST00000467152.1

PDE6B-206, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-206ENST00000467152 RPS6KA4O75676 772 aa24.59■■□□□ 1.53
PDE6B-206ENST00000467152 DCTN1Q14203 1278 aa24.59■■□□□ 1.53
PDE6B-206ENST00000467152 WWC3Q9ULE0 1092 aa24.59■■□□□ 1.53
PDE6B-206ENST00000467152 RFC4P35249 363 aa24.58■■□□□ 1.53
PDE6B-206ENST00000467152 ARHGEF1Q92888 912 aaKnown RBP24.58■■□□□ 1.53
PDE6B-206ENST00000467152 CCDC87Q9NVE4 849 aa24.58■■□□□ 1.53
PDE6B-206ENST00000467152 MAPK8IP3Q9UPT6 1336 aa24.58■■□□□ 1.52
PDE6B-206ENST00000467152 GYS1P13807 737 aa24.57■■□□□ 1.52
PDE6B-206ENST00000467152 ZNF526Q8TF50 670 aaPredicted RBP24.57■■□□□ 1.52
PDE6B-206ENST00000467152 CCDC146Q8IYE0 955 aa24.55■■□□□ 1.52
PDE6B-206ENST00000467152 PARP3Q9Y6F1 533 aa24.55■■□□□ 1.52
PDE6B-206ENST00000467152 HSPA6P17066 643 aa24.54■■□□□ 1.52
PDE6B-206ENST00000467152 RUNDC1Q96C34 613 aa24.54■■□□□ 1.52
PDE6B-206ENST00000467152 TMPOP42166 694 aaKnown RBP24.53■■□□□ 1.52
PDE6B-206ENST00000467152 ZNF790Q6PG37 636 aa24.53■■□□□ 1.52
PDE6B-206ENST00000467152 KCNQ3O43525 872 aa24.52■■□□□ 1.52
PDE6B-206ENST00000467152 RIPK4P57078 832 aa24.52■■□□□ 1.52
PDE6B-206ENST00000467152 BCS1LQ9Y276 419 aa24.52■■□□□ 1.52
PDE6B-206ENST00000467152 DLG5Q8TDM6 1919 aa24.51■■□□□ 1.51
PDE6B-206ENST00000467152 BTBD11A6QL63 1104 aa24.51■■□□□ 1.51
PDE6B-206ENST00000467152 CRKLP46109 303 aaKnown RBP24.51■■□□□ 1.51
PDE6B-206ENST00000467152 TAF7Q15545 349 aaPredicted RBP24.51■■□□□ 1.51
PDE6B-206ENST00000467152 DNAJC10Q8IXB1 793 aa24.51■■□□□ 1.51
PDE6B-206ENST00000467152 TTC5Q8N0Z6 440 aa24.51■■□□□ 1.51
PDE6B-206ENST00000467152 SIPA1L3O60292 1781 aaPredicted RBP24.51■■□□□ 1.51
PDE6B-206ENST00000467152 UBR2Q8IWV8 1755 aa24.5■■□□□ 1.51
PDE6B-206ENST00000467152 A0A0G2JLW4 131 aa24.5■■□□□ 1.51
PDE6B-206ENST00000467152 VSIG10Q8N0Z9 540 aa24.5■■□□□ 1.51
PDE6B-206ENST00000467152 ZNF496Q96IT1 587 aaPredicted RBP24.5■■□□□ 1.51
PDE6B-206ENST00000467152 USP42Q9H9J4 1324 aaKnown RBP24.5■■□□□ 1.51
PDE6B-206ENST00000467152 KCPQ6ZWJ8 1503 aa24.5■■□□□ 1.51
PDE6B-206ENST00000467152 THUMPD2Q9BTF0 503 aaKnown RBP24.49■■□□□ 1.51
PDE6B-206ENST00000467152 DLEC1Q9Y238 1755 aa24.49■■□□□ 1.51
PDE6B-206ENST00000467152 AFDNP55196 1824 aaKnown RBP24.49■■□□□ 1.51
PDE6B-206ENST00000467152 KIF3CO14782 793 aa24.48■■□□□ 1.51
PDE6B-206ENST00000467152 DPEP1P16444 411 aa24.48■■□□□ 1.51
PDE6B-206ENST00000467152 PNISRQ8TF01 805 aaKnown RBP24.48■■□□□ 1.51
PDE6B-206ENST00000467152 RRP7AQ9Y3A4 280 aaKnown RBP24.48■■□□□ 1.51
PDE6B-206ENST00000467152 CYP19A1P11511 503 aaPredicted RBP24.47■■□□□ 1.51
PDE6B-206ENST00000467152 INTS5Q6P9B9 1019 aaKnown RBP24.47■■□□□ 1.51
PDE6B-206ENST00000467152 MRS2Q9HD23 443 aa24.47■■□□□ 1.51
PDE6B-206ENST00000467152 SBF1O95248 1867 aa24.47■■□□□ 1.51
PDE6B-206ENST00000467152 NRXN2Q9P2S2 1712 aa24.47■■□□□ 1.51
PDE6B-206ENST00000467152 MIS18AQ9NYP9 233 aa24.46■■□□□ 1.51
PDE6B-206ENST00000467152 NEUROD2Q15784 382 aa24.45■■□□□ 1.5
PDE6B-206ENST00000467152 FMNL2Q96PY5 1086 aa24.45■■□□□ 1.5
PDE6B-206ENST00000467152 HEG1Q9ULI3 1381 aa24.44■■□□□ 1.5
PDE6B-206ENST00000467152 TNRC6CQ9HCJ0 1690 aaKnown RBP24.44■■□□□ 1.5
PDE6B-206ENST00000467152 ARHGAP27Q6ZUM4 889 aa24.44■■□□□ 1.5
PDE6B-206ENST00000467152 TRIM35Q9UPQ4 493 aa24.44■■□□□ 1.5
PDE6B-206ENST00000467152 PIM2Q9P1W9 311 aa24.43■■□□□ 1.5
PDE6B-206ENST00000467152 SRP68Q9UHB9 627 aaKnown RBP24.43■■□□□ 1.5
PDE6B-206ENST00000467152 LMOD3Q0VAK6 560 aa24.42■■□□□ 1.5
PDE6B-206ENST00000467152 FKBP8Q14318 412 aa24.42■■□□□ 1.5
PDE6B-206ENST00000467152 TEX13AQ9BXU3 409 aaPredicted RBP24.42■■□□□ 1.5
PDE6B-206ENST00000467152 APAF1O14727 1248 aa24.41■■□□□ 1.5
PDE6B-206ENST00000467152 KCNA3P22001 575 aa24.41■■□□□ 1.5
PDE6B-206ENST00000467152 DDR1Q08345 913 aa24.41■■□□□ 1.5
PDE6B-206ENST00000467152 SOS1Q07889 1333 aaPredicted RBP24.4■■□□□ 1.5
PDE6B-206ENST00000467152 TOMM70O94826 608 aa24.4■■□□□ 1.5
PDE6B-206ENST00000467152 STARD3NLO95772 234 aa24.4■■□□□ 1.5
PDE6B-206ENST00000467152 WDR90Q96KV7 1748 aa24.4■■□□□ 1.5
PDE6B-206ENST00000467152 ZPR1O75312 459 aa24.39■■□□□ 1.49
PDE6B-206ENST00000467152 DALRD3Q5D0E6 543 aaKnown RBP24.39■■□□□ 1.49
PDE6B-206ENST00000467152 IFFO2Q5TF58 517 aa24.39■■□□□ 1.49
PDE6B-206ENST00000467152 POLRMTO00411 1230 aaKnown RBP24.38■■□□□ 1.49
PDE6B-206ENST00000467152 APLP1P51693 650 aa24.38■■□□□ 1.49
PDE6B-206ENST00000467152 USP16Q9Y5T5 823 aa24.38■■□□□ 1.49
PDE6B-206ENST00000467152 COL15A1P39059 1388 aa24.38■■□□□ 1.49
PDE6B-206ENST00000467152 PRAMEF22A3QJZ6 481 aa24.37■■□□□ 1.49
PDE6B-206ENST00000467152 SNRPA1P09661 255 aaKnown RBP24.37■■□□□ 1.49
PDE6B-206ENST00000467152 ZBTB1Q9Y2K1 713 aa24.37■■□□□ 1.49
PDE6B-206ENST00000467152 SCN7AQ01118 1682 aa24.37■■□□□ 1.49
PDE6B-206ENST00000467152 TM4SF1P30408 202 aa24.36■■□□□ 1.49
PDE6B-206ENST00000467152 EIF4A1P60842 406 aaKnown RBP24.36■■□□□ 1.49
PDE6B-206ENST00000467152 C9orf131Q5VYM1 1079 aa24.36■■□□□ 1.49
PDE6B-206ENST00000467152 BABAM1Q9NWV8 329 aa24.36■■□□□ 1.49
PDE6B-206ENST00000467152 A1BGP04217 495 aa24.34■■□□□ 1.49
PDE6B-206ENST00000467152 CANXP27824 592 aaKnown RBP24.34■■□□□ 1.49
PDE6B-206ENST00000467152 USPL1Q5W0Q7 1092 aa24.34■■□□□ 1.49
PDE6B-206ENST00000467152 NARFQ9UHQ1 456 aa24.34■■□□□ 1.49
PDE6B-206ENST00000467152 TIAM2Q8IVF5 1701 aa24.34■■□□□ 1.49
PDE6B-206ENST00000467152 CCDC88AQ3V6T2 1871 aa24.34■■□□□ 1.49
PDE6B-206ENST00000467152 EIF5P55010 431 aaKnown RBP24.33■■□□□ 1.49
PDE6B-206ENST00000467152 NMRK2Q9NPI5 230 aa24.33■■□□□ 1.49
PDE6B-206ENST00000467152 TSPYL4Q9UJ04 414 aa24.33■■□□□ 1.49
PDE6B-206ENST00000467152 KDM2BQ8NHM5 1336 aa24.33■■□□□ 1.48
PDE6B-206ENST00000467152 CHL1O00533 1208 aa24.32■■□□□ 1.48
PDE6B-206ENST00000467152 CHRNA5P30532 468 aa24.31■■□□□ 1.48
PDE6B-206ENST00000467152 RBM46Q8TBY0 533 aaKnown RBP24.31■■□□□ 1.48
PDE6B-206ENST00000467152 ZC3H4Q9UPT8 1303 aaKnown RBP24.31■■□□□ 1.48
PDE6B-206ENST00000467152 ANKRD31Q8N7Z5 1873 aa24.3■■□□□ 1.48
PDE6B-206ENST00000467152 KDM3BQ7LBC6 1761 aa24.3■■□□□ 1.48
PDE6B-206ENST00000467152 C16orf71Q8IYS4 520 aaPredicted RBP24.3■■□□□ 1.48
PDE6B-206ENST00000467152 RNF181Q9P0P0 153 aa24.3■■□□□ 1.48
PDE6B-206ENST00000467152 NFIXQ14938 502 aa24.29■■□□□ 1.48
PDE6B-206ENST00000467152 IL6STP40189 918 aaPredicted RBP24.28■■□□□ 1.48
PDE6B-206ENST00000467152 FAM9BQ8IZU0 186 aa24.28■■□□□ 1.48
PDE6B-206ENST00000467152 BCORQ6W2J9 1755 aa24.27■■□□□ 1.48
PDE6B-206ENST00000467152 LAS1LQ9Y4W2 734 aaKnown RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms