RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 BCL2L13Q9BXK5 485 aa6.84□□□□□ -1.31
VPS13A-209ENST00000467124 ZFAND3Q9H8U3 227 aa6.84□□□□□ -1.31
VPS13A-209ENST00000467124 IQSEC3Q9UPP2 1182 aaPredicted RBP6.84□□□□□ -1.31
VPS13A-209ENST00000467124 AMOTL2Q9Y2J4 779 aa6.84□□□□□ -1.31
VPS13A-209ENST00000467124 ERCC3P19447 782 aa6.83□□□□□ -1.32
VPS13A-209ENST00000467124 GTF2E1P29083 439 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-209ENST00000467124 SH3PXD2AQ5TCZ1 1133 aa6.83□□□□□ -1.32
VPS13A-209ENST00000467124 NGLY1Q96IV0 654 aa6.83□□□□□ -1.32
VPS13A-209ENST00000467124 AGBL1Q96MI9 1066 aa6.83□□□□□ -1.32
VPS13A-209ENST00000467124 FHDC1Q9C0D6 1143 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-209ENST00000467124 MPSTP25325 297 aa6.82□□□□□ -1.32
VPS13A-209ENST00000467124 CTC1Q2NKJ3 1217 aa6.82□□□□□ -1.32
VPS13A-209ENST00000467124 PPARGC1BQ86YN6 1023 aaKnown RBP6.82□□□□□ -1.32
VPS13A-209ENST00000467124 NPAS4Q8IUM7 802 aa6.82□□□□□ -1.32
VPS13A-209ENST00000467124 HELQQ8TDG4 1101 aa6.82□□□□□ -1.32
VPS13A-209ENST00000467124 C2orf49Q9BVC5 232 aaPredicted RBP6.82□□□□□ -1.32
VPS13A-209ENST00000467124 PARP3Q9Y6F1 533 aa6.82□□□□□ -1.32
VPS13A-209ENST00000467124 RBM47A0AV96 593 aaKnown RBP6.81□□□□□ -1.32
VPS13A-209ENST00000467124 MEN1O00255 615 aa6.81□□□□□ -1.32
VPS13A-209ENST00000467124 CAPN5O15484 640 aaPredicted RBP6.81□□□□□ -1.32
VPS13A-209ENST00000467124 SPINT1O43278 529 aa6.81□□□□□ -1.32
VPS13A-209ENST00000467124 AVPP01185 164 aa6.81□□□□□ -1.32
VPS13A-209ENST00000467124 RNF144AP50876 292 aaPredicted RBP6.81□□□□□ -1.32
VPS13A-209ENST00000467124 ARHGAP4P98171 946 aa6.81□□□□□ -1.32
VPS13A-209ENST00000467124 RELBQ01201 579 aa6.81□□□□□ -1.32
VPS13A-209ENST00000467124 TEAD4Q15561 434 aa6.81□□□□□ -1.32
VPS13A-209ENST00000467124 LINC00528Q8N1L1 170 aa6.81□□□□□ -1.32
VPS13A-209ENST00000467124 RHBDD1Q8TEB9 315 aa6.81□□□□□ -1.32
VPS13A-209ENST00000467124 HPS1Q92902 700 aa6.81□□□□□ -1.32
VPS13A-209ENST00000467124 MYO19Q96H55 970 aa6.81□□□□□ -1.32
VPS13A-209ENST00000467124 PDZRN3Q9UPQ7 1066 aa6.81□□□□□ -1.32
VPS13A-209ENST00000467124 ZNF16P17020 682 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-209ENST00000467124 CENPCQ03188 943 aa6.8□□□□□ -1.32
VPS13A-209ENST00000467124 AAMPQ13685 434 aa6.8□□□□□ -1.32
VPS13A-209ENST00000467124 GNASQ5JWF2 1037 aa6.8□□□□□ -1.32
VPS13A-209ENST00000467124 ZNF295-AS1Q8N0V1 137 aa6.8□□□□□ -1.32
VPS13A-209ENST00000467124 MRRFQ96E11 262 aaKnown RBP6.8□□□□□ -1.32
VPS13A-209ENST00000467124 ZSCAN10Q96SZ4 725 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-209ENST00000467124 NIFKQ9BYG3 293 aaKnown RBP6.8□□□□□ -1.32
VPS13A-209ENST00000467124 KIAA1522Q9P206 1035 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-209ENST00000467124 DCTN4Q9UJW0 460 aa6.8□□□□□ -1.32
VPS13A-209ENST00000467124 GPC6Q9Y625 555 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-209ENST00000467124 SERTM1A2A2V5 107 aa6.79□□□□□ -1.32
VPS13A-209ENST00000467124 EML1O00423 815 aa6.79□□□□□ -1.32
VPS13A-209ENST00000467124 NPR3P17342 541 aa6.79□□□□□ -1.32
VPS13A-209ENST00000467124 SMCPP49901 116 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-209ENST00000467124 COX20Q5RI15 118 aa6.79□□□□□ -1.32
VPS13A-209ENST00000467124 C16orf46Q6P387 395 aa6.79□□□□□ -1.32
VPS13A-209ENST00000467124 ZNF395Q9H8N7 513 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-209ENST00000467124 HCN4Q9Y3Q4 1203 aa6.79□□□□□ -1.32
VPS13A-209ENST00000467124 SPATA31C2B4DYI2 1134 aa6.78□□□□□ -1.32
VPS13A-209ENST00000467124 FAM13AO94988 1023 aa6.78□□□□□ -1.32
VPS13A-209ENST00000467124 LAPTM4AQ15012 233 aa6.78□□□□□ -1.32
VPS13A-209ENST00000467124 HIF1AQ16665 826 aa6.78□□□□□ -1.32
VPS13A-209ENST00000467124 WDR44Q5JSH3 913 aa6.78□□□□□ -1.32
VPS13A-209ENST00000467124 FAM26DQ5JW98 314 aa6.78□□□□□ -1.32
VPS13A-209ENST00000467124 SLC27A3Q5K4L6 730 aa6.78□□□□□ -1.32
VPS13A-209ENST00000467124 C1orf53Q5VUE5 145 aa6.78□□□□□ -1.32
VPS13A-209ENST00000467124 TMEM214Q6NUQ4 689 aaKnown RBP6.78□□□□□ -1.32
VPS13A-209ENST00000467124 ATCAYQ86WG3 371 aa6.78□□□□□ -1.32
VPS13A-209ENST00000467124 CRIPAKQ8N1N5 446 aa6.78□□□□□ -1.32
VPS13A-209ENST00000467124 TMC1Q8TDI8 760 aa6.78□□□□□ -1.32
VPS13A-209ENST00000467124 GRIP2Q9C0E4 1043 aa6.78□□□□□ -1.32
VPS13A-209ENST00000467124 CCDC87Q9NVE4 849 aa6.78□□□□□ -1.32
VPS13A-209ENST00000467124 ZNF232Q9UNY5 417 aa6.78□□□□□ -1.32
VPS13A-209ENST00000467124 NRG2O14511 850 aaPredicted RBP6.77□□□□□ -1.33
VPS13A-209ENST00000467124 TNFRSF10BO14763 440 aa6.77□□□□□ -1.33
VPS13A-209ENST00000467124 DGAT1O75907 488 aa6.77□□□□□ -1.33
VPS13A-209ENST00000467124 NOS2P35228 1153 aa6.77□□□□□ -1.33
VPS13A-209ENST00000467124 RTN1Q16799 776 aa6.77□□□□□ -1.33
VPS13A-209ENST00000467124 NBPF1Q3BBV0 1214 aa6.77□□□□□ -1.33
VPS13A-209ENST00000467124 ABTB2Q8N961 1025 aa6.77□□□□□ -1.33
VPS13A-209ENST00000467124 QTRT2Q9H974 415 aaKnown RBP6.77□□□□□ -1.33
VPS13A-209ENST00000467124 ZDHHC3Q9NYG2 299 aa6.77□□□□□ -1.33
VPS13A-209ENST00000467124 CABP1Q9NZU7 370 aa6.77□□□□□ -1.33
VPS13A-209ENST00000467124 LRFN2Q9ULH4 789 aa6.77□□□□□ -1.33
VPS13A-209ENST00000467124 FAM187AA6NFU0 413 aa6.76□□□□□ -1.33
VPS13A-209ENST00000467124 ZBTB39O15060 712 aa6.76□□□□□ -1.33
VPS13A-209ENST00000467124 EIF1AXP47813 144 aaKnown RBP6.76□□□□□ -1.33
VPS13A-209ENST00000467124 SCARF1Q14162 830 aa6.76□□□□□ -1.33
VPS13A-209ENST00000467124 ALKBH2Q6NS38 261 aa6.76□□□□□ -1.33
VPS13A-209ENST00000467124 MRPL14Q6P1L8 145 aaKnown RBP6.76□□□□□ -1.33
VPS13A-209ENST00000467124 ZDHHC1Q8WTX9 485 aa6.76□□□□□ -1.33
VPS13A-209ENST00000467124 L3MBTL2Q969R5 705 aa6.76□□□□□ -1.33
VPS13A-209ENST00000467124 ASB16Q96NS5 453 aa6.76□□□□□ -1.33
VPS13A-209ENST00000467124 POLMQ9NP87 494 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-209ENST00000467124 BMP2P12643 396 aa6.75□□□□□ -1.33
VPS13A-209ENST00000467124 TMC7Q7Z402 723 aa6.75□□□□□ -1.33
VPS13A-209ENST00000467124 ZSCAN29Q8IWY8 852 aaPredicted RBP6.75□□□□□ -1.33
VPS13A-209ENST00000467124 INSM2Q96T92 566 aaPredicted RBP6.75□□□□□ -1.33
VPS13A-209ENST00000467124 KLK14Q9P0G3 267 aa6.75□□□□□ -1.33
VPS13A-209ENST00000467124 BRPF3Q9ULD4 1205 aa6.75□□□□□ -1.33
VPS13A-209ENST00000467124 P4HBP07237 508 aaKnown RBP6.74□□□□□ -1.33
VPS13A-209ENST00000467124 DGKZQ13574 1117 aa6.74□□□□□ -1.33
VPS13A-209ENST00000467124 PKDCCQ504Y2 493 aa6.74□□□□□ -1.33
VPS13A-209ENST00000467124 FBXO33Q7Z6M2 555 aa6.74□□□□□ -1.33
VPS13A-209ENST00000467124 RNF217Q8TC41 542 aa6.74□□□□□ -1.33
VPS13A-209ENST00000467124 STIM2Q9P246 746 aa6.74□□□□□ -1.33
VPS13A-209ENST00000467124 NDUFB5O43674 189 aa6.73□□□□□ -1.33
VPS13A-209ENST00000467124 FZD6O60353 706 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms